MGE detailed information
MGE type: Mobilizable plasmid MGE length: 142545 bp
Accession: NZ_CP070907 Location: 1..142545 Organism: Escherichia coli strain 88COLEC Replicon: plasmid p88COLEC-1
Accession: NZ_CP070907 Location: 1..142545 Organism: Escherichia coli strain 88COLEC Replicon: plasmid p88COLEC-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR901_RS23135 () | 1..882 | + | 882 | WP_032206658.1 | RepB family plasmid replication initiator protein | - |
| JR901_RS23140 () | 1767..2129 | - | 363 | WP_072213850.1 | hypothetical protein | - |
| JR901_RS23145 () | 2130..3281 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| JR901_RS23150 () | 3350..3607 | - | 258 | Protein_3 | IS3 family transposase ISEc52 | Transposase |
| JR901_RS23155 () | 3676..4230 | - | 555 | Protein_4 | recombination-associated protein RdgC | - |
| JR901_RS23160 () | 4223..4507 | - | 285 | WP_001567974.1 | hypothetical protein | - |
| JR901_RS23165 () | 4969..5211 | + | 243 | Protein_6 | hypothetical protein | - |
| JR901_RS23170 () | 5224..6432 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| JR901_RS23175 () | 6742..7095 | + | 354 | WP_089586239.1 | hypothetical protein | - |
| JR901_RS23180 () | 7135..7557 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| JR901_RS23185 () | 7583..7723 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| JR901_RS23190 () | 7733..8125 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| JR901_RS23195 () | 8461..9345 | + | 885 | WP_072649745.1 | RepB family plasmid replication initiator protein | - |
| JR901_RS23200 () | 9638..10447 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| JR901_RS23205 () | 10616..11812 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| JR901_RS23210 () | 11829..12830 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| JR901_RS23215 () | 13056..14762 | + | 1707 | Protein_16 | hypothetical protein | - |
| JR901_RS23220 () | 14822..16411 | + | 1590 | WP_038997104.1 | hypothetical protein | - |
| JR901_RS23225 () | 16421..17236 | + | 816 | WP_065898570.1 | hypothetical protein | - |
| JR901_RS23230 () | 17272..17853 | + | 582 | WP_072649747.1 | hypothetical protein | - |
| JR901_RS23235 () | 17865..18374 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| JR901_RS23240 () | 18650..19762 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| JR901_RS23245 () | 19840..19995 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| JR901_RS23250 () | 20257..20954 | - | 698 | Protein_23 | IS1 family transposase | - |
| JR901_RS23255 () | 21004..21447 | - | 444 | Protein_24 | phage antirepressor Ant | - |
| JR901_RS23260 () | 21444..21665 | - | 222 | WP_000245709.1 | host cell division inhibitor Icd-like protein | - |
| JR901_RS23265 () | 22285..22797 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| JR901_RS23270 () | 22801..23340 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| JR901_RS23275 () | 23421..23933 | + | 513 | WP_072649761.1 | hypothetical protein | - |
| JR901_RS23280 () | 23930..24157 | - | 228 | Protein_29 | IS3 family transposase ISEc52 | Transposase |
| JR901_RS23285 () | 24267..25475 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| JR901_RS23290 () | 26188..26673 | + | 486 | WP_016236481.1 | hypothetical protein | - |
| JR901_RS23295 () | 26670..27392 | + | 723 | WP_072649697.1 | hypothetical protein | - |
| JR901_RS23300 () | 27403..27855 | + | 453 | Protein_33 | hypothetical protein | Relaxase |
| JR901_RS23305 () | 27907..28604 | + | 698 | Protein_34 | IS1 family transposase | - |
| JR901_RS23310 () | 28825..29685 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JR901_RS23315 () | 29868..30425 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JR901_RS23320 () | 30589..30729 | + | 141 | WP_020219413.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JR901_RS23325 () | 30847..31551 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JR901_RS23330 () | 31604..32401 | + | 798 | Protein_39 | Tn3 family transposase TnpA_IS3000 | Transposase |
| JR901_RS23335 () | 32518..32964 | + | 447 | WP_038988891.1 | DMT family transporter | - |
| JR901_RS23340 () | 32966..33139 | + | 174 | Protein_41 | IS6 family transposase | - |
| JR901_RS23345 () | 33279..33344 | - | 66 | Protein_42 | EAL domain-containing protein | - |
| JR901_RS23350 () | 33359..33706 | - | 348 | WP_038988888.1 | hypothetical protein | - |
| JR901_RS23355 () | 33931..35406 | - | 1476 | WP_202764053.1 | Mobilization protein A | Relaxase |
| JR901_RS23360 () | 35471..36175 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JR901_RS23365 () | 36248..36487 | + | 240 | WP_011264039.1 | macrolide transporter | - |
| JR901_RS23370 () | 36633..37496 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| JR901_RS23375 () | 37534..37779 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| JR901_RS23380 () | 38248..39039 | + | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| JR901_RS23385 () | 39042..39317 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| JR901_RS23390 () | 39319..39954 | + | 636 | Protein_51 | IS256 family transposase IS406 | Transposase |
| JR901_RS23395 () | 40219..40551 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| JR901_RS23400 () | 40721..41512 | - | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| JR901_RS23405 () | 41601..42443 | - | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| JR901_RS23410 () | 42908..44401 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| JR901_RS23415 () | 44513..44818 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| JR901_RS23420 () | 44846..46060 | - | 1215 | WP_039026029.1 | Inner membrane transport protein YdhC | ARG |
| JR901_RS23425 () | 46277..46723 | - | 447 | Protein_58 | DUF3363 domain-containing protein | - |
| JR901_RS23430 () | 47192..47521 | - | 330 | Protein_59 | IS91 family transposase | - |
| JR901_RS23435 () | 47585..48289 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JR901_RS23440 () | 48342..51188 | + | 2847 | Protein_61 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JR901_RS23445 () | 51324..51566 | + | 243 | WP_000844627.1 | transposase | - |
| JR901_RS23450 () | 51598..52248 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JR901_RS23455 () | 52354..53553 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| JR901_RS23460 () | 53585..54469 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| JR901_RS23465 () | 54607..55014 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| JR901_RS23470 () | 55003..56754 | + | 1752 | Protein_67 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JR901_RS23475 () | 56788..57543 | + | 756 | Protein_68 | N-hydroxyarylamine O-acetyltransferase | - |
| JR901_RS23480 () | 57639..58532 | - | 894 | WP_205899141.1 | putative isomerase YddE | VF |
| JR901_RS23485 () | 58612..59292 | - | 681 | WP_000617115.1 | respiratory nitrate reductase subunit gamma | - |
| JR901_RS23490 () | 59289..59984 | - | 696 | WP_072649765.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| JR901_RS23495 () | 59984..61528 | - | 1545 | WP_000702558.1 | nitrate reductase subunit beta | - |
| JR901_RS23500 () | 61525..65265 | - | 3741 | WP_072649764.1 | nitrate reductase Z subunit alpha | - |
| JR901_RS23505 () | 65360..66748 | - | 1389 | WP_001207923.1 | nitrate/nitrite transporter NarU | - |
| JR901_RS23510 () | 67011..67991 | + | 981 | WP_205899142.1 | IS5 family transposase ISKpn26 | Transposase |
| JR901_RS23515 () | 68139..68420 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JR901_RS23520 () | 68410..68661 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| JR901_RS23525 () | 69821..70789 | + | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| JR901_RS23530 () | 70949..71092 | + | 144 | WP_152930453.1 | hypothetical protein | - |
| JR901_RS23535 () | 71153..71401 | + | 249 | Protein_80 | IS3 family transposase ISEhe3 | Transposase |
| JR901_RS23540 () | 71466..72617 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| JR901_RS23545 () | 72630..72887 | - | 258 | Protein_82 | IS3 family transposase ISEc52 | Transposase |
| JR901_RS23550 () | 72962..73273 | + | 312 | Protein_83 | VRR-NUC domain-containing protein | - |
| JR901_RS23555 () | 73340..73495 | + | 156 | WP_032236586.1 | hypothetical protein | - |
| JR901_RS23560 () | 73997..74623 | + | 627 | WP_000484112.1 | norphogenetic protein | - |
| JR901_RS23565 () | 74620..75297 | + | 678 | WP_077890962.1 | metallophosphoesterase | - |
| JR901_RS23570 () | 75294..75995 | + | 702 | WP_072649706.1 | hypothetical protein | - |
| JR901_RS23575 () | 76297..77559 | + | 1263 | WP_000107689.1 | hypothetical protein | - |
| JR901_RS23580 () | 77632..78138 | + | 507 | WP_000021761.1 | hypothetical protein | - |
| JR901_RS23585 () | 78333..78920 | + | 588 | WP_000675645.1 | hypothetical protein | - |
| JR901_RS23590 () | 78907..79784 | + | 878 | Protein_91 | ead/Ea22-like family protein | - |
| JR901_RS23595 () | 79781..80071 | + | 291 | WP_205899143.1 | DUF4752 family protein | - |
| JR901_RS23600 () | 80068..80739 | + | 672 | WP_000672523.1 | hypothetical protein | - |
| JR901_RS23605 () | 80736..81368 | + | 633 | WP_001289894.1 | ead/Ea22-like family protein | - |
| JR901_RS23610 () | 81370..81548 | + | 179 | Protein_95 | hypothetical protein | - |
| JR901_RS23615 () | 81882..82763 | + | 882 | WP_000628760.1 | hypothetical protein | - |
| JR901_RS23620 () | 82760..83122 | + | 363 | WP_001261543.1 | hypothetical protein | - |
| JR901_RS23625 () | 84181..84537 | - | 357 | WP_001062545.1 | hypothetical protein | - |
| JR901_RS23630 () | 84538..84936 | - | 399 | WP_001648136.1 | hypothetical protein | - |
| JR901_RS23635 () | 85297..85686 | + | 390 | WP_000506724.1 | DNA repair protein | - |
| JR901_RS23640 () | 85759..85980 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JR901_RS23645 () | 85980..86360 | + | 381 | WP_001216033.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JR901_RS23650 () | 86365..86544 | + | 180 | WP_024262170.1 | hypothetical protein | - |
| JR901_RS23655 () | 86572..87615 | + | 1044 | WP_072649708.1 | DUF968 domain-containing protein | - |
| JR901_RS23660 () | 87704..88156 | + | 453 | WP_001326849.1 | late promoter-activating protein | - |
| JR901_RS23665 () | 88242..89435 | + | 1194 | WP_205899144.1 | terminase | - |
| JR901_RS23670 () | 90893..91305 | + | 413 | Protein_107 | phage antirepressor KilAC domain-containing protein | - |
| JR901_RS23675 () | 91338..92189 | - | 852 | WP_000611664.1 | hypothetical protein | - |
| JR901_RS23680 () | 92300..92509 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| JR901_RS23685 () | 92680..93377 | + | 698 | Protein_110 | IS1 family transposase | - |
| JR901_RS23690 () | 93394..94209 | + | 816 | Protein_111 | IS5 family transposase ISKpn26 | Transposase |
| JR901_RS23695 () | 94846..95067 | + | 222 | WP_000542385.1 | hypothetical protein | - |
| JR901_RS23700 () | 95075..96106 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
| JR901_RS23705 () | 96157..96468 | + | 312 | WP_001224246.1 | hypothetical protein | - |
| JR901_RS23710 () | 96716..97276 | + | 561 | WP_015974227.1 | Ref family protein | - |
| JR901_RS23715 () | 97466..98107 | + | 642 | WP_024175651.1 | hypothetical protein | - |
| JR901_RS23720 () | 98183..99310 | - | 1128 | Protein_117 | type III restriction-modification system endonuclease | - |
| JR901_RS23725 () | 99325..100533 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| JR901_RS23730 () | 100640..102433 | - | 1794 | Protein_119 | type III restriction-modification system endonuclease | - |
| JR901_RS23735 () | 102436..104382 | - | 1947 | WP_032190829.1 | site-specific DNA-methyltransferase | - |
| JR901_RS23740 () | 104528..104776 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| JR901_RS23745 () | 104773..105213 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| JR901_RS23750 () | 105247..107064 | - | 1818 | Protein_123 | helicase | - |
| JR901_RS23755 () | 107201..108429 | + | 1229 | WP_153449191.1 | IS3 family transposase IS2 | Transposase |
| JR901_RS23760 () | 109011..109262 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JR901_RS23765 () | 109259..109546 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JR901_RS23770 () | 109836..110036 | - | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| JR901_RS23775 () | 110026..110231 | + | 206 | Protein_128 | transposase | - |
| JR901_RS23780 () | 110406..113921 | - | 3516 | WP_072649717.1 | Outer membrane protein IcsA autotransporter | VF |
| JR901_RS23790 () | 115526..116428 | - | 903 | Protein_131 | IS3 family transposase ISSlo2 | Transposase |
| JR901_RS23795 () | 116438..117589 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| JR901_RS23800 () | 117657..117923 | - | 267 | Protein_133 | IS3 family transposase ISVch4 | Transposase |
| JR901_RS23805 () | 117998..118258 | + | 261 | Protein_134 | IS21 family transposase IS21 | Transposase |
| JR901_RS23810 () | 118258..119055 | + | 798 | WP_000544831.1 | IS21 family transposase IS21 | Transposase |
| JR901_RS23815 () | 119116..119781 | + | 666 | Protein_136 | IS66 family transposase ISCro1 | Transposase |
| JR901_RS23820 () | 119953..120687 | - | 735 | WP_064766422.1 | helix-turn-helix domain-containing protein | - |
| JR901_RS23825 () | 120777..121085 | + | 309 | WP_059039577.1 | PerC family transcriptional regulator | - |
| JR901_RS23830 () | 121244..121582 | + | 339 | WP_025263478.1 | c-type lysozyme inhibitor | - |
| JR901_RS23835 () | 122139..122279 | - | 141 | WP_152930419.1 | hypothetical protein | - |
| JR901_RS23840 () | 122362..123370 | + | 1009 | WP_096959999.1 | IS3 family transposase IS1351 | Transposase |
| JR901_RS23845 () | 123539..124102 | + | 564 | Protein_142 | TetR/AcrR family transcriptional regulator | - |
| JR901_RS23850 () | 124335..127808 | - | 3474 | WP_064186716.1 | cellulose biosynthesis protein BcsC | - |
| JR901_RS23855 () | 128275..128661 | - | 387 | Protein_144 | IS200/IS605 family transposase | - |
| JR901_RS23860 () | 128849..130195 | - | 1347 | WP_064186717.1 | group II intron reverse transcriptase/maturase | - |
| JR901_RS23865 () | 130939..133089 | - | 2151 | WP_064186718.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| JR901_RS23870 () | 133153..135258 | - | 2106 | WP_072716723.1 | UDP-forming cellulose synthase catalytic subunit | - |
| JR901_RS23875 () | 136032..136729 | + | 698 | Protein_148 | IS1 family transposase | - |
| JR901_RS23880 () | 136776..138122 | - | 1347 | WP_162755559.1 | diguanylate cyclase | - |
| JR901_RS23885 () | 138112..140445 | - | 2334 | WP_072662189.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| JR901_RS23890 () | 141037..141734 | + | 698 | Protein_151 | IS1 family transposase | - |
| JR901_RS23895 () | 141749..142141 | - | 393 | Protein_152 | DUF4165 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|