MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP070482 Location: 4575478..4607358 Organism: Escherichia coli strain BTH101 Replicon: chromosome
Accession: NZ_CP070482 Location: 4575478..4607358 Organism: Escherichia coli strain BTH101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JWV29_RS22135 (4571662) | 4571662..4572930 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| JWV29_RS22140 (4572950) | 4572950..4573927 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| JWV29_RS22145 (4574263) | 4574263..4576515 | - | 2253 | Protein_4333 | alpha-amylase family glycosyl hydrolase | - |
| JWV29_RS22155 (4577901) | 4577901..4579274 | + | 1374 | Protein_4334 | DUF5507 domain-containing protein | - |
| JWV29_RS22160 (4579629) | 4579629..4579847 | + | 219 | WP_071524906.1 | recombinase family protein | - |
| JWV29_RS22165 (4580002) | 4580002..4580121 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| JWV29_RS22170 (4580186) | 4580186..4584766 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| JWV29_RS22175 (4585130) | 4585130..4585459 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| JWV29_RS22180 (4585480) | 4585480..4585797 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JWV29_RS22185 (4585835) | 4585835..4586035 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| JWV29_RS22190 (4586044) | 4586044..4586526 | - | 483 | WP_001407480.1 | RadC family protein | - |
| JWV29_RS22195 (4586535) | 4586535..4586993 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| JWV29_RS22200 (4587096) | 4587096..4587319 | - | 224 | Protein_4343 | DUF905 family protein | - |
| JWV29_RS22205 (4587891) | 4587891..4589594 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| JWV29_RS22210 (4589736) | 4589736..4590745 | + | 1010 | Protein_4345 | arsenic transporter | - |
| JWV29_RS22215 (4590758) | 4590758..4590910 | + | 153 | Protein_4346 | arsenate reductase | - |
| JWV29_RS22220 (4591297) | 4591297..4591764 | - | 468 | WP_000702495.1 | protein YfjT | - |
| JWV29_RS22225 (4591788) | 4591788..4592231 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| JWV29_RS22230 (4592231) | 4592231..4592467 | - | 237 | WP_001144029.1 | protein YpjK | - |
| JWV29_RS22235 (4592508) | 4592508..4593209 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| JWV29_RS22240 (4593426) | 4593426..4594247 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| JWV29_RS22245 (4594339) | 4594339..4595202 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| JWV29_RS22250 (4595557) | 4595557..4595928 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| JWV29_RS22255 (4595921) | 4595921..4596994 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| JWV29_RS22260 (4597136) | 4597136..4597399 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| JWV29_RS22265 (4597759) | 4597759..4599375 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| JWV29_RS22270 (4599372) | 4599372..4601561 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| JWV29_RS22275 (4601739) | 4601739..4602365 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| JWV29_RS22280 (4602518) | 4602518..4603927 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| JWV29_RS22285 (4604056) | 4604056..4604268 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| JWV29_RS22290 (4604312) | 4604312..4605268 | + | 957 | WP_000510827.1 | protein YfjH | - |
| JWV29_RS22295 (4605512) | 4605512..4606753 | - | 1242 | WP_000101722.1 | Prophage integrase IntA ; Integrase | Integrase |
| JWV29_RS22305 (4607534) | 4607534..4608016 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| JWV29_RS22310 (4608187) | 4608187..4608624 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| JWV29_RS22315 (4608614) | 4608614..4608904 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| JWV29_RS22320 (4608966) | 4608966..4609307 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| JWV29_RS22325 (4609456) | 4609456..4611117 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| JWV29_RS22330 (4611203) | 4611203..4612081 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |