MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85397 bp
Accession: NZ_CP070294 Location: 1..85397 Organism: Escherichia albertii strain Sample 166 Replicon: plasmid pESA139_2
Accession: NZ_CP070294 Location: 1..85397 Organism: Escherichia albertii strain Sample 166 Replicon: plasmid pESA139_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRC43_RS24145 (105) | 105..551 | - | 447 | WP_000616195.1 | hypothetical protein | - |
| JRC43_RS24150 (698) | 698..1036 | + | 339 | WP_236305784.1 | hypothetical protein | - |
| JRC43_RS24155 (1162) | 1162..1653 | - | 492 | WP_208634907.1 | type III toxin-antitoxin system ToxN/AbiQ family toxin | - |
| JRC43_RS24160 (2555) | 2555..2836 | - | 282 | WP_052989983.1 | hypothetical protein | - |
| JRC43_RS24165 (2994) | 2994..3473 | + | 480 | WP_052989984.1 | hypothetical protein | - |
| JRC43_RS25915 (3726) | 3726..3821 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| JRC43_RS25730 (4274) | 4274..4810 | - | 537 | WP_224505089.1 | hypothetical protein | - |
| JRC43_RS24175 (4898) | 4898..5083 | - | 186 | WP_208634908.1 | hypothetical protein | - |
| JRC43_RS24180 (5244) | 5244..7400 | - | 2157 | WP_208634909.1 | type IA DNA topoisomerase | - |
| JRC43_RS24185 (7404) | 7404..8459 | - | 1056 | WP_192525435.1 | AAA family ATPase | - |
| JRC43_RS24190 (8687) | 8687..10225 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| JRC43_RS24195 (10275) | 10275..10622 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| JRC43_RS24200 (10619) | 10619..10999 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| JRC43_RS24205 (11237) | 11237..11578 | - | 342 | WP_001547188.1 | hypothetical protein | - |
| JRC43_RS24210 (11589) | 11589..12077 | - | 489 | WP_050192389.1 | thermonuclease family protein | - |
| JRC43_RS24215 (12074) | 12074..12391 | - | 318 | WP_050192388.1 | hypothetical protein | - |
| JRC43_RS24220 (12767) | 12767..13069 | - | 303 | WP_137649409.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| JRC43_RS24225 (13066) | 13066..13479 | - | 414 | WP_000722604.1 | cag pathogenicity island Cag12 family protein | - |
| JRC43_RS24230 (13476) | 13476..15311 | - | 1836 | WP_208634910.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JRC43_RS24235 (15314) | 15314..15670 | - | 357 | Protein_19 | Type IV secretion system protein PtlH | VF |
| JRC43_RS24240 (15763) | 15763..16991 | + | 1229 | WP_164473239.1 | IS3 family transposase IS2 | Transposase |
| JRC43_RS24245 (17004) | 17004..17681 | - | 678 | Protein_21 | Type IV secretion system protein VirB11 | VF |
| JRC43_RS24250 (17683) | 17683..18489 | - | 807 | Protein_22 | Type IV secretion system protein virB10 | VF |
| JRC43_RS24255 (18526) | 18526..19739 | + | 1214 | WP_167330638.1 | IS3 family transposase IS629 | Transposase |
| JRC43_RS24260 (19904) | 19904..20695 | + | 792 | Protein_24 | site-specific integrase | - |
| JRC43_RS24265 (20833) | 20833..21108 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| JRC43_RS24270 (21102) | 21102..21746 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| JRC43_RS24275 (21975) | 21975..22946 | + | 972 | WP_001103691.1 | plasmid segregation protein ParM | - |
| JRC43_RS24280 (22951) | 22951..23343 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| JRC43_RS24285 (23348) | 23348..24107 | - | 760 | Protein_29 | DUF4113 domain-containing protein | - |
| JRC43_RS24290 (24103) | 24103..24765 | + | 663 | Protein_30 | Multifunctional conjugation protein TraI | Relaxase |
| JRC43_RS24295 (24758) | 24758..25312 | + | 555 | WP_208634911.1 | fertility inhibition protein FinO | - |
| JRC43_RS24300 (25448) | 25448..25660 | + | 213 | WP_096949658.1 | hypothetical protein | - |
| JRC43_RS24305 (25906) | 25906..25980 | + | 75 | Protein_33 | endonuclease | - |
| - (26236) | 26236..26297 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (26236) | 26236..26297 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (26236) | 26236..26297 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (26236) | 26236..26297 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| JRC43_RS24310 (26341) | 26341..26490 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| JRC43_RS24315 (26774) | 26774..27031 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| JRC43_RS25735 (27048) | 27048..27299 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| JRC43_RS25740 (27290) | 27290..27337 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| JRC43_RS24325 (27330) | 27330..27812 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| JRC43_RS24330 (27805) | 27805..28374 | + | 570 | Protein_39 | plasmid replication initiator RepA | - |
| JRC43_RS24335 (28484) | 28484..28753 | + | 270 | WP_000079946.1 | type II toxin-antitoxin system antitoxin YacA | - |
| JRC43_RS24340 (28753) | 28753..29031 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| JRC43_RS24345 (29077) | 29077..29502 | + | 426 | Protein_42 | 3'-5' exonuclease | - |
| JRC43_RS24350 (29667) | 29667..30191 | + | 525 | WP_000823671.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| JRC43_RS24355 (30453) | 30453..30878 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JRC43_RS24360 (30875) | 30875..31225 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JRC43_RS24365 (31256) | 31256..32869 | + | 1614 | WP_000080197.1 | IS66 family transposase ISEc23 | Transposase |
| JRC43_RS24370 (33050) | 33050..34022 | - | 973 | Protein_47 | hypothetical protein | - |
| JRC43_RS24375 (34778) | 34778..35179 | + | 402 | Protein_48 | RepB family plasmid replication initiator protein | - |
| JRC43_RS24380 (35239) | 35239..36036 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| JRC43_RS24385 (36036) | 36036..37208 | - | 1173 | WP_000952373.1 | IS21 family transposase IS21 | Transposase |
| JRC43_RS24390 (37311) | 37311..37889 | + | 579 | Protein_51 | RepB family plasmid replication initiator protein | - |
| JRC43_RS24395 (38168) | 38168..38908 | - | 741 | WP_001584328.1 | IS91 family transposase ISMno23 | Transposase |
| JRC43_RS24400 (39411) | 39411..39560 | - | 150 | WP_171002980.1 | hypothetical protein | - |
| JRC43_RS24405 (40100) | 40100..40405 | + | 306 | WP_001587484.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JRC43_RS24410 (40640) | 40640..41536 | + | 897 | WP_208634913.1 | transcriptional regulator HilD | - |
| JRC43_RS24415 (41550) | 41550..41993 | + | 444 | WP_001220546.1 | hypothetical protein | VF |
| JRC43_RS24420 (42291) | 42291..43001 | + | 711 | WP_137649358.1 | Toxin coregulated pilin | VF |
| JRC43_RS24425 (43062) | 43062..44633 | + | 1572 | WP_115202918.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| JRC43_RS24430 (44652) | 44652..45065 | + | 414 | WP_001587478.1 | TcpQ domain-containing protein | - |
| JRC43_RS24435 (45083) | 45083..46540 | + | 1458 | WP_001587477.1 | hypothetical protein | - |
| JRC43_RS24440 (46543) | 46543..47103 | + | 561 | WP_208634903.1 | type IV pilus Longus assembly protein LngE | - |
| JRC43_RS24445 (47105) | 47105..47932 | + | 828 | WP_115202917.1 | pilus assembly protein | - |
| JRC43_RS24450 (47920) | 47920..48405 | + | 486 | WP_208634904.1 | type IV pilus Longus-associated protein LngG | - |
| JRC43_RS24455 (48603) | 48603..49937 | + | 1335 | WP_115202944.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| JRC43_RS24460 (49921) | 49921..50946 | + | 1026 | WP_208634905.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JRC43_RS24465 (50961) | 50961..52082 | + | 1122 | WP_097493302.1 | pilus biosynthesis protein | - |
| JRC43_RS24470 (52085) | 52085..52939 | + | 855 | WP_137649360.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JRC43_RS24475 (53432) | 53432..54075 | - | 644 | Protein_68 | IS3 family transposase IS3 | Transposase |
| JRC43_RS24480 (54131) | 54131..55669 | - | 1539 | WP_208634737.1 | IS66 family transposase ISEc8 | Transposase |
| JRC43_RS24485 (55719) | 55719..56066 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| JRC43_RS24490 (56063) | 56063..56443 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| JRC43_RS24495 (56685) | 56685..60182 | - | 3498 | WP_137649438.1 | Outer membrane protein IcsA autotransporter | VF |
| JRC43_RS24500 (61178) | 61178..61888 | - | 711 | Protein_73 | IS3 family transposase IS629 | Transposase |
| JRC43_RS24505 (62487) | 62487..62699 | - | 213 | Protein_74 | ISNCY family transposase ISKpn21 | Transposase |
| JRC43_RS25745 (62710) | 62710..63897 | - | 1188 | WP_015060504.1 | Type IV secretion system protein PtlC | VF |
| JRC43_RS25750 (63945) | 63945..65462 | - | 1518 | WP_244259569.1 | Type IV secretion system protein virB4 | VF |
| JRC43_RS24515 (65481) | 65481..65777 | - | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| JRC43_RS24520 (65755) | 65755..66402 | - | 648 | WP_000953526.1 | Type IV secretion system protein virB1 | VF |
| JRC43_RS24525 (66435) | 66435..66647 | - | 213 | WP_069907344.1 | hypothetical protein | - |
| JRC43_RS24530 (66577) | 66577..67095 | - | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| JRC43_RS24535 (67448) | 67448..68214 | - | 767 | Protein_81 | hypothetical protein | - |
| JRC43_RS24540 (68217) | 68217..68465 | - | 249 | Protein_82 | DNA distortion polypeptide 1 | - |
| JRC43_RS24545 (68581) | 68581..68769 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| JRC43_RS24550 (68779) | 68779..69978 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| JRC43_RS24555 (70151) | 70151..70450 | - | 300 | Protein_85 | DNA distortion polypeptide 1 | - |
| JRC43_RS24565 (70791) | 70791..71048 | - | 258 | WP_074160415.1 | hypothetical protein | - |
| JRC43_RS24570 (71061) | 71061..71210 | - | 150 | WP_171002983.1 | hypothetical protein | - |
| JRC43_RS24575 (71280) | 71280..71459 | - | 180 | WP_000439079.1 | hypothetical protein | - |
| JRC43_RS24580 (71502) | 71502..71831 | - | 330 | WP_000866654.1 | hypothetical protein | - |
| JRC43_RS24585 (71924) | 71924..72139 | - | 216 | WP_001180117.1 | hypothetical protein | - |
| JRC43_RS24590 (72129) | 72129..72374 | - | 246 | WP_137649390.1 | hypothetical protein | - |
| JRC43_RS24595 (72422) | 72422..72745 | - | 324 | WP_001181905.1 | hypothetical protein | - |
| JRC43_RS24600 (72891) | 72891..73172 | - | 282 | WP_137649391.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JRC43_RS24605 (73162) | 73162..73413 | - | 252 | WP_000121743.1 | plasmid stabilization protein | - |
| JRC43_RS24610 (74609) | 74609..75445 | + | 837 | WP_061873651.1 | replication initiation protein | - |
| JRC43_RS24615 (75485) | 75485..75931 | + | 447 | WP_208634906.1 | hypothetical protein | - |
| JRC43_RS24620 (76067) | 76067..76423 | + | 357 | WP_244259570.1 | DNA distortion polypeptide 3 | - |
| JRC43_RS24625 (76445) | 76445..77305 | - | 861 | WP_073534376.1 | hypothetical protein | - |
| JRC43_RS24630 (77323) | 77323..77514 | - | 192 | WP_244259571.1 | YcxB family protein | - |
| JRC43_RS25755 (77618) | 77618..77917 | - | 300 | WP_073534375.1 | aminopeptidase | - |
| JRC43_RS24640 (78352) | 78352..78663 | - | 312 | WP_001423339.1 | hypothetical protein | - |
| JRC43_RS24645 (78679) | 78679..78909 | - | 231 | WP_000051063.1 | plasmid partition protein ParG | - |
| JRC43_RS24650 (78961) | 78961..79581 | - | 621 | WP_000864791.1 | ParA family protein | - |
| JRC43_RS24655 (79877) | 79877..80521 | + | 645 | WP_137649405.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JRC43_RS24660 (80676) | 80676..80759 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| JRC43_RS24665 (81836) | 81836..82084 | + | 249 | WP_000312658.1 | hypothetical protein | - |
| JRC43_RS24670 (82296) | 82296..82589 | - | 294 | WP_032302212.1 | hypothetical protein | - |
| JRC43_RS24675 (82618) | 82618..82986 | - | 369 | WP_112017381.1 | transcriptional regulator | - |
| JRC43_RS24680 (82992) | 82992..83198 | - | 207 | Protein_109 | type II toxin-antitoxin system HigB family toxin | - |
| JRC43_RS24685 (83231) | 83231..84199 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| JRC43_RS25760 (84255) | 84255..84359 | - | 105 | Protein_111 | type II toxin-antitoxin system HigB family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|