MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP070048 Location: 4382788..4383768 Organism: Escherichia coli strain FDAARGOS_1290 Replicon: chromosome
Accession: NZ_CP070048 Location: 4382788..4383768 Organism: Escherichia coli strain FDAARGOS_1290 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K20_RS21165 (4378466) | 4378466..4378582 | - | 117 | Protein_4170 | VOC family protein | - |
| I6K20_RS21170 (4378620) | 4378620..4378838 | - | 219 | Protein_4171 | hypothetical protein | - |
| I6K20_RS21175 (4379007) | 4379007..4379753 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| I6K20_RS21180 (4379809) | 4379809..4380354 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| I6K20_RS21185 (4380366) | 4380366..4380623 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| I6K20_RS25310 (4381114) | 4381114..4381245 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| I6K20_RS21195 (4381361) | 4381361..4382601 | + | 1241 | Protein_4176 | helicase YjhR | - |
| I6K20_RS21200 (4382788) | 4382788..4383768 | + | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| I6K20_RS25315 (4384068) | 4384068..4384273 | - | 206 | Protein_4178 | HNH endonuclease | - |
| I6K20_RS21205 (4384383) | 4384383..4385363 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| I6K20_RS21210 (4385428) | 4385428..4386534 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| I6K20_RS21215 (4386554) | 4386554..4387270 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |