MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP070007 Location: 1111180..1112160 Organism: Escherichia coli strain FDAARGOS_1288 Replicon: chromosome
Accession: NZ_CP070007 Location: 1111180..1112160 Organism: Escherichia coli strain FDAARGOS_1288 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
I6K18_RS05415 (1107678) | 1107678..1108394 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
I6K18_RS05420 (1108414) | 1108414..1109520 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
I6K18_RS05425 (1109585) | 1109585..1110565 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
I6K18_RS28240 (1110675) | 1110675..1110880 | + | 206 | Protein_1061 | HNH endonuclease | - |
I6K18_RS05430 (1111180) | 1111180..1112160 | - | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
I6K18_RS05435 (1112347) | 1112347..1113587 | - | 1241 | Protein_1063 | helicase YjhR | - |
I6K18_RS28245 (1113703) | 1113703..1113834 | + | 132 | WP_001309182.1 | hypothetical protein | - |
I6K18_RS05445 (1114325) | 1114325..1114582 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
I6K18_RS05450 (1114594) | 1114594..1115139 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
I6K18_RS05455 (1115195) | 1115195..1115941 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
I6K18_RS05460 (1116110) | 1116110..1116328 | + | 219 | Protein_1068 | hypothetical protein | - |
I6K18_RS05465 (1116366) | 1116366..1116482 | + | 117 | Protein_1069 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |