MGE detailed information
MGE type: Conjugative plasmid MGE length: 133493 bp
Accession: NZ_CP069991 Location: 1..133493 Organism: Escherichia coli strain FDAARGOS_1304 Replicon: plasmid unnamed
Accession: NZ_CP069991 Location: 1..133493 Organism: Escherichia coli strain FDAARGOS_1304 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K34_RS25045 (902) | 902..1641 | - | 740 | Protein_1 | IS3 family transposase IS629 | Transposase |
| I6K34_RS25050 (1696) | 1696..1944 | - | 249 | Protein_2 | IS21 family transposase IS21 | Transposase |
| I6K34_RS25055 (2427) | 2427..3179 | + | 753 | WP_000471454.1 | Chaperone protein caf1M | VF |
| I6K34_RS25060 (3206) | 3206..5758 | + | 2553 | WP_000392724.1 | F1 capsule-anchoring protein | VF |
| I6K34_RS25065 (5774) | 5774..6196 | + | 423 | WP_000243157.1 | Protein AfaD | VF |
| I6K34_RS25070 (6304) | 6304..6789 | + | 486 | WP_021547907.1 | Dr family adhesin structural subunit | - |
| I6K34_RS25080 (8527) | 8527..8943 | + | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| I6K34_RS25085 (9148) | 9148..9879 | - | 732 | WP_224955279.1 | Virulence regulon transcriptional activator VirF | VF |
| I6K34_RS25090 (10264) | 10264..10769 | + | 506 | Protein_10 | IS3 family transposase IS3H | Transposase |
| I6K34_RS25095 (10762) | 10762..10875 | + | 114 | Protein_11 | integrase core domain-containing protein | - |
| I6K34_RS25100 (11025) | 11025..12023 | + | 999 | WP_000756334.1 | ABC transporter substrate-binding protein | - |
| I6K34_RS25105 (12023) | 12023..13060 | + | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| I6K34_RS25110 (13060) | 13060..13821 | + | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| I6K34_RS25115 (13878) | 13878..15065 | + | 1188 | WP_025999368.1 | MFS transporter | - |
| I6K34_RS25120 (15143) | 15143..15418 | - | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| I6K34_RS25125 (15776) | 15776..16075 | - | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6K34_RS25130 (16065) | 16065..16328 | - | 264 | WP_001089474.1 | hypothetical protein | - |
| I6K34_RS26210 (16348) | 16348..16485 | - | 138 | Protein_19 | XRE family transcriptional regulator | - |
| I6K34_RS25140 (16905) | 16905..17363 | - | 459 | WP_001236002.1 | hypothetical protein | - |
| I6K34_RS25145 (17504) | 17504..18352 | - | 849 | WP_001057995.1 | 3'-5' exonuclease | - |
| I6K34_RS25150 (18468) | 18468..18617 | - | 150 | Protein_22 | IS3 family transposase | - |
| I6K34_RS25155 (18656) | 18656..20194 | - | 1539 | WP_000099150.1 | IS66 family transposase ISEc22 | Transposase |
| I6K34_RS25160 (20360) | 20360..21532 | + | 1173 | WP_000952373.1 | IS21 family transposase IS21 | Transposase |
| I6K34_RS25165 (21532) | 21532..22329 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| I6K34_RS25170 (22369) | 22369..22725 | - | 357 | WP_033550337.1 | IS66 family transposase ISKpn24 | Transposase |
| I6K34_RS25175 (22722) | 22722..23126 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| I6K34_RS25180 (23242) | 23242..24276 | + | 1035 | Protein_28 | IS3 family transposase IS3 | Transposase |
| I6K34_RS25185 (24505) | 24505..26013 | - | 1509 | WP_032145081.1 | group II intron reverse transcriptase/maturase | - |
| I6K34_RS25190 (26686) | 26686..27036 | - | 351 | Protein_30 | IS3 family transposase | - |
| I6K34_RS25195 (27122) | 27122..28621 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| I6K34_RS25200 (28618) | 28618..29373 | + | 756 | WP_021579173.1 | IS21 family transposase ISEc10 | Transposase |
| I6K34_RS25205 (29438) | 29438..29841 | - | 404 | Protein_33 | IS3 family transposase IS629 | Transposase |
| I6K34_RS25210 (29867) | 29867..30172 | + | 306 | Protein_34 | IS91 family transposase ISSbo1 | Transposase |
| I6K34_RS25215 (30695) | 30695..31870 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| I6K34_RS25220 (31939) | 31939..34200 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| I6K34_RS25225 (34369) | 34369..35145 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| I6K34_RS25230 (35153) | 35153..36028 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| I6K34_RS25235 (36360) | 36360..37046 | - | 687 | Protein_39 | replication initiation protein | - |
| I6K34_RS25240 (38616) | 38616..38834 | - | 219 | WP_001336934.1 | hypothetical protein | - |
| I6K34_RS25245 (38963) | 38963..39310 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| I6K34_RS25250 (39330) | 39330..39839 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| I6K34_RS25255 (39836) | 39836..40096 | - | 261 | WP_000371883.1 | hypothetical protein | - |
| I6K34_RS25260 (40198) | 40198..40937 | + | 740 | Protein_44 | IS3 family transposase IS629 | Transposase |
| I6K34_RS25265 (41610) | 41610..43118 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| I6K34_RS25270 (43202) | 43202..43681 | + | 480 | Protein_46 | IS3 family transposase IS629 | Transposase |
| I6K34_RS25275 (43684) | 43684..44301 | - | 618 | WP_244469714.1 | Serine protease EspC | VF |
| I6K34_RS25280 (44355) | 44355..45334 | + | 980 | Protein_48 | IS5 family transposase ISKpn26 | Transposase |
| I6K34_RS25285 (45484) | 45484..46116 | - | 633 | Protein_49 | histidine-type phosphatase | - |
| I6K34_RS25290 (46238) | 46238..46723 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| I6K34_RS25295 (46748) | 46748..47233 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| I6K34_RS25300 (47220) | 47220..47915 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| I6K34_RS25305 (47920) | 47920..49050 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| I6K34_RS25310 (49040) | 49040..50323 | - | 1284 | WP_021579171.1 | ABC transporter permease | - |
| I6K34_RS25315 (50326) | 50326..51705 | - | 1380 | WP_021579170.1 | Fe-S-containing protein | - |
| I6K34_RS25320 (51809) | 51809..52336 | - | 528 | WP_000178050.1 | iron transporter | - |
| I6K34_RS25325 (52377) | 52377..54263 | - | 1887 | WP_001332815.1 | FTR1 family protein | - |
| I6K34_RS25330 (54610) | 54610..55371 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| I6K34_RS25335 (55758) | 55758..56462 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6K34_RS25340 (56516) | 56516..56683 | + | 168 | Protein_60 | IS110 family transposase | - |
| I6K34_RS25345 (57061) | 57061..58533 | - | 1473 | WP_000621194.1 | ATP-binding protein | - |
| I6K34_RS25350 (58530) | 58530..59252 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| I6K34_RS25355 (59394) | 59394..59993 | + | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| I6K34_RS25360 (60004) | 60004..60774 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| I6K34_RS25365 (60804) | 60804..61052 | + | 249 | WP_000738203.1 | hypothetical protein | - |
| I6K34_RS25370 (61202) | 61202..61300 | - | 99 | WP_137491101.1 | transposase | - |
| I6K34_RS25375 (61493) | 61493..61801 | + | 309 | Protein_67 | IS91 family transposase ISSbo1 | Transposase |
| I6K34_RS25385 (62829) | 62829..63686 | - | 858 | WP_021534656.1 | incFII family plasmid replication initiator RepA | - |
| I6K34_RS25390 (63679) | 63679..63753 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6K34_RS25395 (63987) | 63987..64244 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| I6K34_RS25400 (64529) | 64529..64678 | - | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| - (64726) | 64726..64782 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (64726) | 64726..64782 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (64726) | 64726..64782 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (64726) | 64726..64782 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| I6K34_RS25405 (64877) | 64877..65314 | - | 438 | WP_000872609.1 | hypothetical protein | - |
| I6K34_RS25410 (65467) | 65467..65850 | - | 384 | WP_001109264.1 | hypothetical protein | - |
| I6K34_RS25415 (65953) | 65953..66414 | - | 462 | WP_000760080.1 | thermonuclease family protein | - |
| I6K34_RS25420 (67167) | 67167..67370 | - | 204 | WP_001336517.1 | hypothetical protein | - |
| I6K34_RS25425 (67522) | 67522..68079 | - | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| I6K34_RS25430 (68134) | 68134..68880 | - | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| I6K34_RS25435 (68900) | 68900..74170 | - | 5271 | WP_001545323.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6K34_RS25440 (74170) | 74170..76449 | - | 2280 | WP_134087822.1 | Coupling protein TraD | VF |
| I6K34_RS25445 (76500) | 76500..77237 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| I6K34_RS25450 (77440) | 77440..78171 | - | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| I6K34_RS25455 (78203) | 78203..78700 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| I6K34_RS25460 (78719) | 78719..81538 | - | 2820 | WP_001537571.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| I6K34_RS25465 (81535) | 81535..82908 | - | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| I6K34_RS25470 (82895) | 82895..83287 | - | 393 | WP_000138369.1 | F-type conjugal transfer protein TrbF | - |
| I6K34_RS25475 (83241) | 83241..83555 | - | 315 | WP_001336805.1 | P-type conjugative transfer protein TrbJ | - |
| I6K34_RS25480 (83545) | 83545..84090 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6K34_RS25485 (84077) | 84077..84361 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6K34_RS25490 (84442) | 84442..84702 | + | 261 | WP_000736412.1 | hypothetical protein | - |
| I6K34_RS25495 (84758) | 84758..85099 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| I6K34_RS25500 (85113) | 85113..85856 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6K34_RS25505 (85849) | 85849..86106 | - | 258 | WP_000864310.1 | conjugal transfer protein TrbE | - |
| I6K34_RS25510 (86133) | 86133..87983 | - | 1851 | WP_000826177.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6K34_RS25515 (87980) | 87980..88402 | - | 423 | WP_001229309.1 | HNH endonuclease signature motif containing protein | - |
| I6K34_RS25520 (88427) | 88427..88798 | - | 372 | WP_000174465.1 | hypothetical protein | - |
| I6K34_RS25525 (88795) | 88795..89433 | - | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6K34_RS25530 (89460) | 89460..89978 | - | 519 | WP_000009088.1 | hypothetical protein | - |
| I6K34_RS25535 (90041) | 90041..90349 | - | 309 | WP_000412445.1 | hypothetical protein | - |
| I6K34_RS25540 (90376) | 90376..91368 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| I6K34_RS25545 (91365) | 91365..91997 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| I6K34_RS25550 (91994) | 91994..92380 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| I6K34_RS25555 (92377) | 92377..95007 | - | 2631 | WP_000069771.1 | type IV secretion system protein TraC | - |
| I6K34_RS26215 (95374) | 95374..95592 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| I6K34_RS25560 (95672) | 95672..96145 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| I6K34_RS25565 (96138) | 96138..96551 | - | 414 | WP_000549574.1 | hypothetical protein | - |
| I6K34_RS25570 (96544) | 96544..96765 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| I6K34_RS25575 (96900) | 96900..97415 | - | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6K34_RS25580 (97415) | 97415..97732 | - | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| I6K34_RS25585 (97719) | 97719..98285 | - | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| I6K34_RS25590 (98275) | 98275..99726 | - | 1452 | WP_000146663.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| I6K34_RS25595 (99726) | 99726..100454 | - | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| I6K34_RS25600 (100441) | 100441..101007 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| I6K34_RS25605 (101029) | 101029..101340 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| I6K34_RS25610 (101355) | 101355..101714 | - | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| I6K34_RS25615 (101747) | 101747..102148 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| I6K34_RS25620 (102241) | 102241..102930 | - | 690 | WP_033550311.1 | conjugal transfer transcriptional regulator TraJ | - |
| I6K34_RS25625 (103117) | 103117..103500 | - | 384 | WP_001151538.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| I6K34_RS25630 (103914) | 103914..104423 | + | 510 | WP_000759173.1 | hypothetical protein | VF |
| I6K34_RS25635 (104720) | 104720..105541 | - | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| I6K34_RS25640 (105651) | 105651..105947 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| I6K34_RS26220 (106247) | 106247..106544 | + | 298 | Protein_121 | hypothetical protein | - |
| I6K34_RS25645 (106845) | 106845..106970 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| I6K34_RS26225 (106912) | 106912..107061 | - | 150 | Protein_123 | plasmid maintenance protein Mok | - |
| I6K34_RS25650 (107083) | 107083..107262 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| - (107047) | 107047..107271 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (107047) | 107047..107271 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (107047) | 107047..107271 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (107047) | 107047..107271 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| I6K34_RS25655 (107240) | 107240..108002 | - | 763 | Protein_125 | plasmid SOS inhibition protein A | - |
| I6K34_RS25660 (107999) | 107999..108433 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| I6K34_RS25665 (108502) | 108502..110466 | - | 1965 | WP_033550309.1 | ParB/RepB/Spo0J family partition protein | - |
| I6K34_RS25670 (110527) | 110527..110760 | - | 234 | WP_033550308.1 | DUF905 family protein | - |
| I6K34_RS25675 (110818) | 110818..111345 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| I6K34_RS25680 (111647) | 111647..112096 | + | 450 | Protein_130 | hypothetical protein | - |
| I6K34_RS25685 (112182) | 112182..112745 | - | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| I6K34_RS25690 (112792) | 112792..114153 | - | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| I6K34_RS25695 (114205) | 114205..114435 | - | 231 | WP_001537563.1 | hypothetical protein | - |
| I6K34_RS25700 (114953) | 114953..115424 | + | 472 | Protein_134 | hypothetical protein | - |
| I6K34_RS25705 (115403) | 115403..115594 | - | 192 | WP_001027049.1 | hypothetical protein | - |
| I6K34_RS25710 (115594) | 115594..116013 | - | 420 | WP_000271761.1 | DUF1380 family protein | - |
| I6K34_RS25715 (116060) | 116060..116485 | - | 426 | WP_001198915.1 | antirestriction protein | - |
| I6K34_RS25720 (116899) | 116899..117669 | - | 771 | WP_001044390.1 | hypothetical protein | - |
| I6K34_RS25725 (117714) | 117714..118232 | - | 519 | WP_224955273.1 | DUF1380 family protein | - |
| I6K34_RS25730 (118162) | 118162..118383 | - | 222 | WP_001104892.1 | hypothetical protein | - |
| I6K34_RS25735 (118384) | 118384..119067 | - | 684 | WP_000086171.1 | DNA methylase | - |
| I6K34_RS25740 (119143) | 119143..119454 | - | 312 | WP_001309256.1 | hypothetical protein | - |
| I6K34_RS25745 (119451) | 119451..119979 | - | 529 | Protein_143 | DUF1281 domain-containing protein | - |
| I6K34_RS26230 (119981) | 119981..120064 | + | 84 | Protein_144 | DUF4113 domain-containing protein | - |
| I6K34_RS25755 (120194) | 120194..120970 | - | 777 | Protein_145 | transposase DNA-binding-containing protein | - |
| I6K34_RS25760 (121204) | 121204..122166 | - | 963 | WP_000756328.1 | ParB family protein | - |
| I6K34_RS25765 (122163) | 122163..123368 | - | 1206 | WP_000817635.1 | Plasmid partition protein A | VF |
| I6K34_RS25770 (124084) | 124084..124335 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| I6K34_RS25775 (124332) | 124332..124619 | + | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6K34_RS25780 (124621) | 124621..125032 | + | 412 | Protein_150 | DDE-type integrase/transposase/recombinase | - |
| I6K34_RS25785 (125676) | 125676..126653 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| I6K34_RS25790 (126896) | 126896..127636 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| I6K34_RS25795 (127757) | 127757..127945 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| I6K34_RS25800 (128312) | 128312..129481 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| I6K34_RS25805 (129707) | 129707..129882 | - | 176 | Protein_155 | IS3 family transposase | - |
| I6K34_RS25810 (130328) | 130328..130600 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| I6K34_RS25815 (131137) | 131137..131561 | - | 425 | Protein_157 | IS3 family transposase IS2 | Transposase |
| I6K34_RS25820 (131651) | 131651..132124 | - | 474 | Protein_158 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|