MGE detailed information
MGE type: Conjugative plasmid MGE length: 127965 bp
Accession: NZ_CP069590 Location: 1..127965 Organism: Escherichia coli strain FDAARGOS_1266 Replicon: plasmid unnamed1
Accession: NZ_CP069590 Location: 1..127965 Organism: Escherichia coli strain FDAARGOS_1266 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J96_RS24685 () | 676..1380 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS24690 () | 1524..2078 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| I6J96_RS24695 () | 2209..3039 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| I6J96_RS24700 () | 3177..3617 | + | 441 | Protein_4 | CatB-related O-acetyltransferase | - |
| I6J96_RS24705 () | 3671..4375 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS24710 () | 4698..5402 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS24715 () | 5466..5852 | + | 387 | Protein_7 | Tn3 family transposase TnpR_Tn3 | Transposase |
| I6J96_RS24720 () | 6035..6895 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| I6J96_RS24725 () | 7921..8778 | - | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| I6J96_RS24730 () | 8771..8845 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6J96_RS24735 () | 9070..9330 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| I6J96_RS24740 () | 9570..10160 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| I6J96_RS24745 () | 10198..10407 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| I6J96_RS24750 () | 10453..10914 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| I6J96_RS24755 () | 11159..11371 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| I6J96_RS24760 () | 11500..12060 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| I6J96_RS24765 () | 12163..13023 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| I6J96_RS24770 () | 13082..13828 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| I6J96_RS24775 () | 13848..19118 | - | 5271 | WP_048967012.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6J96_RS24780 () | 19118..21307 | - | 2190 | WP_032208361.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6J96_RS24785 () | 21560..22291 | - | 732 | WP_024221017.1 | complement resistance protein TraT | - |
| I6J96_RS24790 () | 22323..22820 | - | 498 | WP_000605861.1 | hypothetical protein | - |
| I6J96_RS24795 () | 22839..25658 | - | 2820 | WP_001007057.1 | conjugal transfer mating pair stabilization protein TraG | - |
| I6J96_RS24800 () | 25655..26227 | - | 573 | Protein_24 | conjugal transfer protein TraH | - |
| I6J96_RS24805 () | 26279..26983 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS24810 () | 27059..27301 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| I6J96_RS24815 () | 27333..27983 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| I6J96_RS24820 () | 28089..29288 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| I6J96_RS24825 () | 29320..30204 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| I6J96_RS24830 () | 30342..30749 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| I6J96_RS24835 () | 30738..31487 | + | 750 | Protein_31 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| I6J96_RS24840 () | 31511..32116 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| I6J96_RS24845 () | 32211..34565 | + | 2355 | Protein_33 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| I6J96_RS24850 () | 34618..35322 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS24855 () | 35347..36543 | + | 1197 | Protein_35 | IS3 family transposase | - |
| I6J96_RS24860 () | 36565..36798 | + | 234 | Protein_36 | Tn3 family transposase ISPsy39 | Transposase |
| I6J96_RS24865 () | 36875..37183 | + | 309 | Protein_37 | IS4 family transposase ISEc13 | Transposase |
| I6J96_RS24870 () | 37242..38552 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| I6J96_RS24875 () | 38545..39618 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| I6J96_RS24880 () | 39624..40448 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| I6J96_RS24885 () | 40459..41346 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| I6J96_RS24890 () | 41336..42214 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| I6J96_RS24895 () | 42345..42785 | - | 441 | Protein_43 | zinc-binding dehydrogenase | - |
| I6J96_RS24900 () | 43186..44076 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| I6J96_RS24905 () | 44101..44481 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| I6J96_RS24910 () | 44514..45479 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| I6J96_RS24915 () | 45525..46277 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| I6J96_RS24920 () | 46882..47166 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| I6J96_RS24925 () | 47166..47441 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6J96_RS24930 () | 47547..47840 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| I6J96_RS24935 () | 47875..48003 | - | 129 | Protein_51 | IS481 family transposase | - |
| I6J96_RS24940 () | 48036..49205 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| I6J96_RS24945 () | 49698..50005 | + | 308 | Protein_53 | type II toxin-antitoxin system ParD family antitoxin | - |
| I6J96_RS24950 () | 50294..50991 | + | 698 | Protein_54 | IS1 family transposase IS1S | Transposase |
| I6J96_RS24955 () | 51245..52267 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| I6J96_RS24960 () | 52252..53817 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| I6J96_RS24965 () | 53892..54308 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| I6J96_RS24970 () | 54305..54535 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| I6J96_RS24975 () | 54916..58709 | + | 3794 | Protein_59 | pcar | - |
| I6J96_RS24980 () | 58754..59170 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| I6J96_RS24985 () | 59167..59397 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| I6J96_RS24990 () | 59662..60162 | + | 501 | WP_000528932.1 | hypothetical protein | - |
| I6J96_RS24995 () | 60175..60948 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| I6J96_RS25000 () | 61159..62772 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| I6J96_RS25005 () | 62803..63153 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| I6J96_RS25010 () | 63150..63575 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| I6J96_RS25015 () | 63637..64788 | + | 1152 | WP_031325939.1 | DUF3800 domain-containing protein | - |
| I6J96_RS25020 () | 64822..65334 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| I6J96_RS25025 () | 65880..66098 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| I6J96_RS25030 () | 66100..66405 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| I6J96_RS25035 () | 66406..67212 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| I6J96_RS25040 () | 67986..68741 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| I6J96_RS25045 () | 69329..70495 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| I6J96_RS25050 () | 70495..71466 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| I6J96_RS25055 () | 72264..73205 | + | 942 | WP_106426161.1 | DUF1281 domain-containing protein | - |
| I6J96_RS25060 () | 73238..73542 | + | 305 | Protein_76 | hypothetical protein | - |
| I6J96_RS25065 () | 73619..74302 | + | 684 | WP_000086185.1 | DNA methylase | - |
| I6J96_RS25070 () | 74303..74524 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| I6J96_RS25075 () | 74538..74972 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| I6J96_RS25080 () | 75023..75799 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| I6J96_RS25085 () | 76339..76641 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| I6J96_RS25090 () | 76688..77110 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| I6J96_RS25095 () | 77107..77298 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| I6J96_RS25100 () | 78333..78563 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| I6J96_RS25105 () | 78615..79976 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| I6J96_RS25110 () | 80023..80586 | + | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| I6J96_RS25115 () | 81450..81977 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| I6J96_RS25120 () | 82033..82266 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| I6J96_RS25125 () | 82325..84283 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| I6J96_RS25130 () | 84338..84772 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| I6J96_RS25135 () | 84769..85488 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| I6J96_RS25140 () | 85500..85688 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 85500..85724 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 85500..85724 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 85500..85724 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 85500..85724 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 85657..85722 | - | 66 | - | - | Antitoxin Detail |
| I6J96_RS25145 () | 85768..85926 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| I6J96_RS25150 () | 86845..87132 | + | 288 | WP_000107537.1 | hypothetical protein | - |
| I6J96_RS25155 () | 87253..88074 | + | 822 | WP_204097655.1 | DUF945 domain-containing protein | - |
| I6J96_RS25160 () | 88371..89018 | - | 648 | WP_000614282.1 | hypothetical protein | VF |
| I6J96_RS25165 () | 89304..89687 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| I6J96_RS25170 () | 89881..90567 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| I6J96_RS25175 () | 90661..90888 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| I6J96_RS25180 () | 90922..91284 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| I6J96_RS25185 () | 91289..91600 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| I6J96_RS25190 () | 91622..92188 | + | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| I6J96_RS25195 () | 92199..92903 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| I6J96_RS25200 () | 92903..94330 | + | 1428 | WP_000146638.1 | conjugal transfer protein TraB | - |
| I6J96_RS25205 () | 94320..94904 | + | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| I6J96_RS25210 () | 94858..95211 | + | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| I6J96_RS25215 () | 95204..95455 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| I6J96_RS25220 () | 95452..95967 | + | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6J96_RS25225 () | 96102..96323 | + | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| I6J96_RS25230 () | 96483..99110 | + | 2628 | WP_001064239.1 | type IV secretion system protein TraC | - |
| I6J96_RS25235 () | 99107..99493 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| I6J96_RS25240 () | 99490..100122 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| I6J96_RS25245 () | 100119..101111 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| I6J96_RS25250 () | 101141..101446 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| I6J96_RS25255 () | 101455..102093 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6J96_RS25260 () | 102090..103898 | + | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6J96_RS25265 () | 103925..104182 | + | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| I6J96_RS25270 () | 104175..104918 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6J96_RS25275 () | 104934..105272 | + | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| I6J96_RS25280 () | 105399..105683 | + | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6J96_RS25285 () | 105670..106215 | + | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6J96_RS25290 () | 106145..106486 | + | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| I6J96_RS25295 () | 106434..106859 | + | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| I6J96_RS25300 () | 106846..107655 | + | 810 | Protein_124 | conjugal transfer protein TraH | - |
| I6J96_RS25305 () | 107719..108423 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS25310 () | 108429..108659 | + | 231 | WP_077727617.1 | DUF4158 domain-containing protein | - |
| I6J96_RS25315 () | 108841..110103 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| I6J96_RS25320 () | 110359..111234 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| I6J96_RS25325 () | 111281..111613 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| I6J96_RS25330 () | 111627..114422 | + | 2796 | Protein_130 | Tn3 family transposase TnpA_Tn3 | Transposase |
| I6J96_RS25335 () | 114521..115174 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| I6J96_RS25340 () | 115267..115524 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| I6J96_RS25345 () | 115457..115858 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| I6J96_RS25350 () | 115995..116543 | - | 549 | Protein_134 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| I6J96_RS25355 () | 116609..117313 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS25360 () | 117353..117544 | - | 192 | Protein_136 | Tn3 family transposase TnpR_Tn3 | Transposase |
| I6J96_RS25365 () | 117814..118518 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6J96_RS25370 () | 118576..119106 | - | 531 | Protein_138 | histidine-type phosphatase | - |
| I6J96_RS25375 () | 119228..119713 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| I6J96_RS25380 () | 119738..120223 | - | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| I6J96_RS25385 () | 120210..120905 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| I6J96_RS25390 () | 120910..122040 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| I6J96_RS25395 () | 122030..123313 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| I6J96_RS25400 () | 123316..124695 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| I6J96_RS25405 () | 124799..125326 | - | 528 | WP_000178050.1 | iron transporter | - |
| I6J96_RS25410 () | 125367..127253 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|