MGE detailed information
MGE type: Conjugative plasmid MGE length: 118909 bp
Accession: NZ_CP069499 Location: 1..118909 Organism: Escherichia coli strain FDAARGOS_1258 Replicon: plasmid unnamed
Accession: NZ_CP069499 Location: 1..118909 Organism: Escherichia coli strain FDAARGOS_1258 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J88_RS00010 () | 727..5997 | - | 5271 | WP_039719944.1 | conjugative transfer relaxase/helicase TraI | - |
| I6J88_RS00015 () | 5997..8204 | - | 2208 | WP_032362909.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6J88_RS00020 () | 8255..8992 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| I6J88_RS00025 () | 9195..9926 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| I6J88_RS00030 () | 9958..10461 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| I6J88_RS00035 () | 10476..13298 | - | 2823 | WP_021532807.1 | conjugal transfer mating pair stabilization protein TraG | - |
| I6J88_RS00040 () | 13295..14668 | - | 1374 | WP_001535740.1 | conjugal transfer protein TraH | - |
| I6J88_RS00045 () | 14655..15314 | - | 660 | Protein_8 | P-type conjugative transfer protein TrbJ | - |
| I6J88_RS00050 () | 15304..15849 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6J88_RS00055 () | 15836..16120 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6J88_RS00060 () | 16201..16536 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| I6J88_RS00065 () | 16517..16858 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| I6J88_RS00070 () | 16872..17615 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6J88_RS00075 () | 17608..17865 | - | 258 | WP_000864309.1 | conjugal transfer protein TrbE | - |
| I6J88_RS00080 () | 17892..19742 | - | 1851 | WP_021515413.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6J88_RS00085 () | 19739..20377 | - | 639 | WP_021515414.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6J88_RS00090 () | 20386..20691 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| I6J88_RS00095 () | 20721..21713 | - | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| I6J88_RS00100 () | 21710..22342 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| I6J88_RS00105 () | 22339..22725 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| I6J88_RS00110 () | 22722..25352 | - | 2631 | WP_021515415.1 | type IV secretion system protein TraC | - |
| I6J88_RS00115 () | 25478..25825 | - | 348 | WP_021515416.1 | hypothetical protein | - |
| I6J88_RS00120 () | 25853..26071 | - | 219 | WP_001377841.1 | hypothetical protein | - |
| I6J88_RS00125 () | 26149..26622 | - | 474 | WP_021515417.1 | hypothetical protein | - |
| I6J88_RS00130 () | 26615..26836 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| I6J88_RS00135 () | 26971..27483 | - | 513 | WP_001526035.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6J88_RS00140 () | 27476..27985 | - | 510 | WP_001526036.1 | hypothetical protein | - |
| I6J88_RS00145 () | 27978..28334 | - | 357 | WP_071779623.1 | conjugal transfer protein TrbD | - |
| I6J88_RS00150 () | 28288..28875 | - | 588 | WP_024187484.1 | conjugal transfer protein TraP | - |
| I6J88_RS00155 () | 28844..30295 | - | 1452 | WP_021515420.1 | conjugal transfer protein TraB | - |
| I6J88_RS00160 () | 30295..30999 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| I6J88_RS00165 () | 31010..31576 | - | 567 | WP_000399805.1 | type IV conjugative transfer system protein TraE | - |
| I6J88_RS00170 () | 31598..31909 | - | 312 | WP_204086105.1 | type IV conjugative transfer system protein TraL | - |
| I6J88_RS00175 () | 31924..32286 | - | 363 | WP_001098993.1 | type IV conjugative transfer system pilin TraA | - |
| I6J88_RS00180 () | 32320..32547 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| I6J88_RS00185 () | 32642..33328 | - | 687 | WP_021515421.1 | PAS domain-containing protein | - |
| I6J88_RS00190 () | 33522..33905 | - | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| I6J88_RS00195 () | 34248..34838 | + | 591 | WP_122516882.1 | transglycosylase SLT domain-containing protein | - |
| I6J88_RS00200 () | 35135..35956 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| I6J88_RS00205 () | 36066..36362 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| I6J88_RS00210 () | 36833..37087 | - | 255 | WP_072254791.1 | hypothetical protein | - |
| I6J88_RS00215 () | 37353..37595 | - | 243 | WP_000540588.1 | hypothetical protein | - |
| I6J88_RS00220 () | 37654..37977 | - | 324 | WP_000533253.1 | hypothetical protein | - |
| I6J88_RS00225 () | 38273..38585 | + | 313 | Protein_44 | hypothetical protein | - |
| I6J88_RS00230 () | 38823..38984 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| I6J88_RS00235 () | 39056..40090 | + | 1035 | Protein_46 | transposase | - |
| I6J88_RS00240 () | 40142..40375 | + | 234 | Protein_47 | protein sok | - |
| - () | 40151..40336 | - | 186 | NuclAT_0 | - | - |
| - () | 40151..40336 | - | 186 | NuclAT_0 | - | - |
| - () | 40151..40336 | - | 186 | NuclAT_0 | - | - |
| - () | 40151..40336 | - | 186 | NuclAT_0 | - | - |
| I6J88_RS00245 () | 40293..40607 | - | 315 | WP_001562885.1 | hypothetical protein | - |
| I6J88_RS00250 () | 40604..41323 | - | 720 | WP_021515423.1 | plasmid SOS inhibition protein A | - |
| I6J88_RS00255 () | 41320..41754 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| I6J88_RS00260 () | 41809..43758 | - | 1950 | WP_021532809.1 | ParB/RepB/Spo0J family partition protein | - |
| I6J88_RS00265 () | 43819..44052 | - | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| I6J88_RS00270 () | 44108..44629 | - | 522 | WP_000290849.1 | single-stranded DNA-binding protein | - |
| I6J88_RS00275 () | 45102..45356 | - | 255 | WP_072254791.1 | hypothetical protein | - |
| I6J88_RS00280 () | 45508..46071 | - | 564 | WP_021515427.1 | class I SAM-dependent methyltransferase | - |
| I6J88_RS00285 () | 46118..47479 | - | 1362 | WP_021515428.1 | DUF3560 domain-containing protein | - |
| I6J88_RS00290 () | 47531..47761 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| I6J88_RS00295 () | 48273..48828 | + | 556 | Protein_58 | hypothetical protein | - |
| I6J88_RS00300 () | 48798..48989 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| I6J88_RS00305 () | 48986..49408 | - | 423 | WP_000271739.1 | DUF1380 family protein | - |
| I6J88_RS00310 () | 49455..49757 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| I6J88_RS00315 () | 50296..51066 | - | 771 | WP_021532812.1 | hypothetical protein | - |
| I6J88_RS00320 () | 51111..51545 | - | 435 | WP_016235424.1 | DUF1380 family protein | - |
| I6J88_RS00325 () | 51559..51780 | - | 222 | WP_021532813.1 | hypothetical protein | - |
| I6J88_RS00330 () | 51781..52464 | - | 684 | WP_000085884.1 | DNA methylase | - |
| I6J88_RS00335 () | 52541..52852 | - | 312 | WP_032144809.1 | hypothetical protein | - |
| I6J88_RS00340 () | 52849..53751 | - | 903 | WP_077769867.1 | DUF1281 domain-containing protein | - |
| I6J88_RS00345 () | 54169..54417 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| I6J88_RS00350 () | 54414..54851 | + | 438 | WP_016245169.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6J88_RS00355 () | 54851..56091 | + | 1241 | Protein_70 | translesion error-prone DNA polymerase V subunit UmuC | - |
| I6J88_RS00360 () | 56126..56518 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| I6J88_RS00365 () | 56523..57494 | - | 972 | WP_021515435.1 | stable plasmid inheritance protein | - |
| I6J88_RS00370 () | 57723..58367 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| I6J88_RS00375 () | 58361..58636 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| I6J88_RS00380 () | 58774..59583 | - | 810 | WP_021515436.1 | site-specific integrase | - |
| I6J88_RS00385 () | 59584..59889 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| I6J88_RS00390 () | 59891..60109 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| I6J88_RS00395 () | 62430..63071 | + | 642 | WP_021515437.1 | hypothetical protein | - |
| I6J88_RS00400 () | 64246..65223 | + | 978 | WP_021515438.1 | RepB family plasmid replication initiator protein | - |
| I6J88_RS00405 () | 65502..66242 | - | 741 | WP_021515439.1 | tyrosine-type recombinase/integrase | - |
| I6J88_RS00410 () | 66363..66551 | - | 189 | WP_032144810.1 | hypothetical protein | - |
| I6J88_RS00415 () | 66913..68082 | + | 1170 | WP_204086103.1 | hypothetical protein | - |
| I6J88_RS00420 () | 68308..68439 | - | 132 | Protein_83 | IS3 family transposase | - |
| I6J88_RS00425 () | 68437..68576 | - | 140 | Protein_84 | IS110 family transposase | - |
| I6J88_RS00430 () | 68923..69195 | - | 273 | WP_021515441.1 | hypothetical protein | - |
| I6J88_RS00435 () | 70655..72625 | + | 1971 | WP_021532814.1 | TonB-dependent receptor | - |
| I6J88_RS00440 () | 72774..73247 | - | 474 | Protein_87 | IS3 family transposase | - |
| I6J88_RS00445 () | 73337..74845 | - | 1509 | WP_032144821.1 | group II intron reverse transcriptase/maturase | - |
| I6J88_RS00450 () | 75518..76257 | - | 740 | Protein_89 | IS3 family transposase | - |
| I6J88_RS00455 () | 76421..76681 | - | 261 | Protein_90 | transposase | - |
| I6J88_RS00460 () | 76757..76951 | - | 195 | Protein_91 | transposase | - |
| I6J88_RS00465 () | 77312..78388 | + | 1077 | WP_204086104.1 | DDE-type integrase/transposase/recombinase | - |
| I6J88_RS00470 () | 79023..80891 | - | 1869 | WP_021515447.1 | hypothetical protein | - |
| I6J88_RS00475 () | 83221..83661 | - | 441 | Protein_94 | hypothetical protein | - |
| I6J88_RS00480 () | 83936..85183 | - | 1248 | WP_021515379.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| I6J88_RS00485 () | 85243..87390 | - | 2148 | WP_021515380.1 | type I secretion system permease/ATPase | - |
| I6J88_RS00490 () | 87387..88655 | - | 1269 | WP_032144804.1 | TolC family protein | - |
| I6J88_RS00495 () | 88713..89015 | - | 303 | WP_021515382.1 | hypothetical protein | - |
| I6J88_RS00500 () | 89548..90696 | + | 1149 | Protein_99 | IS3 family transposase | - |
| I6J88_RS00505 () | 90891..91181 | + | 291 | Protein_100 | IS3 family transposase | - |
| I6J88_RS00510 () | 91558..92310 | + | 753 | WP_021515384.1 | fimbria/pilus periplasmic chaperone | - |
| I6J88_RS00515 () | 92373..94889 | + | 2517 | WP_162896960.1 | fimbria/pilus outer membrane usher protein | - |
| I6J88_RS00520 () | 94905..95327 | + | 423 | WP_021515386.1 | hypothetical protein | - |
| I6J88_RS00525 () | 95435..95920 | + | 486 | WP_021515387.1 | Dr family adhesin structural subunit | - |
| I6J88_RS00530 () | 96357..96773 | + | 417 | WP_021515389.1 | SdiA-regulated domain-containing protein | - |
| I6J88_RS00535 () | 96951..98339 | - | 1389 | WP_021515390.1 | group II intron reverse transcriptase/maturase | - |
| I6J88_RS00540 () | 98897..99688 | - | 792 | WP_021515391.1 | AraC family transcriptional regulator | - |
| I6J88_RS00545 () | 99964..100979 | - | 1016 | Protein_108 | IS3 family transposase | - |
| I6J88_RS00550 () | 101108..102259 | + | 1152 | Protein_109 | IS3 family transposase | - |
| I6J88_RS00555 () | 102722..103897 | - | 1176 | WP_001020414.1 | enterotoxin production-related protein TieB | - |
| I6J88_RS00560 () | 103966..106227 | - | 2262 | WP_021515394.1 | TonB-dependent receptor | - |
| I6J88_RS00565 () | 106396..107172 | - | 777 | WP_021515395.1 | energy transducer TonB | - |
| I6J88_RS00570 () | 107180..108055 | - | 876 | WP_021515396.1 | ChaN family lipoprotein | - |
| I6J88_RS00575 () | 108332..108826 | + | 495 | Protein_114 | IS91 family transposase | - |
| I6J88_RS00580 () | 109092..109367 | - | 276 | WP_021515398.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6J88_RS00585 () | 109367..109651 | - | 285 | WP_024187480.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| I6J88_RS00590 () | 110199..110627 | - | 429 | WP_021515400.1 | Exc2 family lipoprotein | - |
| I6J88_RS00595 () | 110708..110887 | - | 180 | Protein_118 | entry exclusion protein 1 | - |
| I6J88_RS00600 () | 111079..111726 | + | 648 | WP_021515401.1 | hypothetical protein | - |
| I6J88_RS00605 () | 111951..112250 | - | 300 | WP_021515402.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6J88_RS00610 () | 112240..112503 | - | 264 | WP_001089474.1 | hypothetical protein | - |
| I6J88_RS00615 () | 112610..112870 | - | 261 | WP_019842130.1 | hypothetical protein | - |
| I6J88_RS00620 () | 113573..114430 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| I6J88_RS00625 () | 114423..114497 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6J88_RS00630 () | 114733..114990 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| I6J88_RS00635 () | 115275..115424 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 115472..115528 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 115472..115528 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 115472..115528 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 115472..115528 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| I6J88_RS00640 () | 115623..116060 | - | 438 | WP_000872609.1 | hypothetical protein | - |
| I6J88_RS00645 () | 116213..116597 | - | 385 | Protein_128 | hypothetical protein | - |
| I6J88_RS00650 () | 116700..117161 | - | 462 | WP_019842128.1 | thermonuclease family protein | - |
| I6J88_RS00655 () | 117903..118106 | - | 204 | WP_001336517.1 | hypothetical protein | - |
| I6J88_RS00660 () | 118258..118815 | - | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|