MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36471 bp
Accession: NZ_CP069460 Location: 1..36471 Organism: Escherichia coli strain FDAARGOS_1249 Replicon: plasmid unnamed1
Accession: NZ_CP069460 Location: 1..36471 Organism: Escherichia coli strain FDAARGOS_1249 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J79_RS24400 () | 413..1339 | + | 927 | WP_016230921.1 | HTH-type transcriptional regulator CatM | VF |
| I6J79_RS24405 () | 1436..2839 | + | 1404 | WP_016230922.1 | FAD-dependent tricarballylate dehydrogenase TcuA | - |
| I6J79_RS24410 () | 2826..3965 | + | 1140 | WP_059328375.1 | tricarballylate utilization 4Fe-4S protein TcuB | - |
| I6J79_RS24415 () | 4020..5315 | + | 1296 | WP_032190702.1 | tricarballylate/proton symporter TcuC | - |
| I6J79_RS24420 () | 5629..5842 | + | 214 | Protein_4 | Tn3 family transposase | - |
| I6J79_RS24425 () | 6242..6526 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| I6J79_RS24430 () | 6526..6801 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6J79_RS24435 () | 7137..7235 | - | 99 | Protein_7 | proQ/FINO family protein | - |
| I6J79_RS24440 () | 7264..8232 | + | 969 | Protein_8 | IS5 family transposase IS903B | Transposase |
| I6J79_RS24445 () | 8274..8609 | - | 336 | WP_089537698.1 | colicin transporter | - |
| I6J79_RS24450 () | 8738..9085 | + | 348 | WP_000142455.1 | hypothetical protein | - |
| I6J79_RS24455 () | 9103..9693 | - | 591 | WP_000194570.1 | hypothetical protein | - |
| I6J79_RS24460 () | 9693..9950 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| I6J79_RS24465 () | 10544..10762 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| I6J79_RS24470 () | 10764..11069 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| I6J79_RS24475 () | 11070..11876 | + | 807 | WP_000016968.1 | site-specific integrase | - |
| I6J79_RS24480 () | 12556..13287 | - | 732 | WP_000504263.1 | replication initiation protein | - |
| I6J79_RS24485 () | 13907..15112 | + | 1206 | WP_001442122.1 | Plasmid partition protein A | VF |
| I6J79_RS24490 () | 15109..16080 | + | 972 | WP_001233385.1 | ParB/RepB/Spo0J family partition protein | - |
| I6J79_RS24495 () | 16217..17362 | - | 1146 | Protein_19 | translesion error-prone DNA polymerase V subunit UmuC | - |
| I6J79_RS24500 () | 17425..18423 | + | 999 | WP_000549075.1 | IS91 family transposase ISMno24 | Transposase |
| I6J79_RS24505 () | 18420..19331 | + | 912 | WP_001442123.1 | hypothetical protein | - |
| I6J79_RS24510 () | 19408..20631 | + | 1224 | WP_001696651.1 | tyrosine-type recombinase/integrase | - |
| I6J79_RS24520 () | 22056..22340 | - | 285 | Protein_24 | IS66 family transposase ISEc43 | Transposase |
| I6J79_RS24525 () | 22427..24556 | + | 2130 | Protein_25 | type IV conjugative transfer system coupling protein TraD | - |
| I6J79_RS24530 () | 24556..29826 | + | 5271 | WP_204147835.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6J79_RS24535 () | 29846..30592 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| I6J79_RS24540 () | 30647..31204 | + | 558 | WP_204147836.1 | fertility inhibition protein FinO | - |
| I6J79_RS24545 () | 32301..32762 | + | 462 | WP_000760080.1 | thermonuclease family protein | - |
| I6J79_RS24550 () | 32865..33249 | + | 385 | Protein_30 | hypothetical protein | - |
| I6J79_RS24555 () | 33402..33839 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - () | 33934..33990 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33934..33990 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33934..33990 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33934..33990 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| I6J79_RS24560 () | 34038..34187 | + | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| I6J79_RS24565 () | 34472..34729 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| I6J79_RS24570 () | 34964..35038 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6J79_RS24575 () | 35031..35888 | + | 858 | WP_016239092.1 | incFII family plasmid replication initiator RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|