NZ_CP0694391..168315

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 168315 bp
Accession: NZ_CP069439        Location: 1..168315         Organism: Escherichia coli strain FDAARGOS_1260       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
I6J90_RS24255 () 473..597 - 125 Protein_0 IS66 family transposase ISKox1 Transposase
I6J90_RS24260 () 658..903 + 246 Protein_1 secretoglobin family protein -
I6J90_RS24265 () 1344..2529 + 1186 Protein_2 IS110 family transposase -
I6J90_RS24270 () 2740..3148 + 409 Protein_3 hypothetical protein -
I6J90_RS24275 () 3401..4796 - 1396 Protein_4 class II fumarate hydratase -
I6J90_RS24280 () 5100..6453 - 1354 Protein_5 C4-dicarboxylate transporter DcuC -
I6J90_RS24285 () 6525..7691 - 1167 Protein_6 cystathionine beta-lyase -
I6J90_RS24290 () 8175..9537 + 1363 Protein_7 adenylosuccinate lyase -
I6J90_RS24295 () 9675..11060 + 1386 Protein_8 MmgE/PrpD family protein -
I6J90_RS24300 () 11132..12005 - 874 Protein_9 LysR family transcriptional regulator -
I6J90_RS24305 () 12256..12733 - 478 Protein_10 IS3 family transposase -
I6J90_RS24310 () 12823..14331 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
I6J90_RS24315 () 15004..15743 - 740 Protein_12 IS3 family transposase IS629 Transposase
I6J90_RS24320 () 15798..16046 - 249 Protein_13 IS21 family transposase IS21 Transposase
I6J90_RS24325 () 16529..17281 + 753 WP_000471454.1 Protein UmuD VF
I6J90_RS24330 () 17344..19860 + 2517 WP_162929852.1 Group II intron-encoded protein LtrA VF
I6J90_RS24335 () 19876..20298 + 423 WP_000243157.1 Plasmid segregation protein ParM VF
I6J90_RS24340 () 20406..20891 + 486 WP_001545321.1 Dr family adhesin structural subunit -
I6J90_RS24345 () 21295..21711 + 417 WP_000466682.1 SdiA-regulated domain-containing protein -
I6J90_RS24350 () 21916..22707 - 792 WP_000456855.1 HTH-type transcriptional activator RhaR VF
I6J90_RS24355 () 23032..23537 + 506 Protein_20 IS3 family transposase IS3H Transposase
I6J90_RS24360 () 23530..23643 + 114 Protein_21 transposase -
I6J90_RS24365 () 23793..24791 + 999 WP_000756334.1 ABC transporter substrate-binding protein -
I6J90_RS24370 () 24791..25828 + 1038 WP_001545318.1 Vitamin B12 import system permease protein BtuC VF
I6J90_RS24375 () 25828..26589 + 762 WP_000020504.1 Vitamin B12 import ATP-binding protein BtuD VF
I6J90_RS24380 () 26646..27833 + 1188 WP_025999368.1 MFS transporter -
I6J90_RS24385 () 27911..28186 - 276 WP_000877662.1 bacteriocin immunity protein -
I6J90_RS24390 () 28544..28843 - 300 WP_000119542.1 type II toxin-antitoxin system RelE/ParE family toxin -
I6J90_RS24395 () 28833..29096 - 264 WP_001089474.1 hypothetical protein -
I6J90_RS24400 () 29203..29463 - 261 WP_001545316.1 hypothetical protein -
I6J90_RS24405 () 29673..30155 - 483 WP_001337004.1 hypothetical protein -
I6J90_RS24410 () 30272..31120 - 849 WP_001057995.1 3'-5' exonuclease -
I6J90_RS24415 () 31236..31385 - 150 Protein_32 IS3 family transposase -
I6J90_RS24420 () 31424..32962 - 1539 WP_000099150.1 IS66 family transposase ISEc22 Transposase
I6J90_RS24425 () 33011..33358 - 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
I6J90_RS24430 () 33355..33759 - 405 WP_000839179.1 IS66 family transposase ISEc22 Transposase
I6J90_RS24435 () 33875..34909 + 1035 Protein_36 IS3 family transposase IS3 Transposase
I6J90_RS24440 () 35138..36646 - 1509 WP_204147730.1 group II intron reverse transcriptase/maturase -
I6J90_RS24445 () 37319..37669 - 351 Protein_38 IS3 family transposase IS629 Transposase
I6J90_RS24450 () 37755..39254 + 1500 WP_000143800.1 IS21 family transposase ISEc10 Transposase
I6J90_RS24455 () 39251..40006 + 756 WP_000065240.1 IS21 family transposase ISEc10 Transposase
I6J90_RS24460 () 39897..40474 - 578 Protein_41 IS3 family transposase IS629 Transposase
I6J90_RS24465 () 40500..40805 + 306 Protein_42 IS91 family transposase ISSbo1 Transposase
I6J90_RS24470 () 41328..42503 - 1176 WP_001020413.1 hypothetical protein VF
I6J90_RS24475 () 42572..44833 - 2262 WP_001100763.1 TonB-dependent receptor -
I6J90_RS24480 () 45002..45778 - 777 WP_000981091.1 energy transducer TonB -
I6J90_RS24485 () 45786..46661 - 876 WP_001224623.1 ChaN family lipoprotein -
I6J90_RS24490 () 46993..47679 - 687 Protein_47 replication initiation protein -
I6J90_RS24495 () 49249..49467 - 219 WP_001336934.1 hypothetical protein -
I6J90_RS24500 () 49596..49943 + 348 WP_000142452.1 hypothetical protein -
I6J90_RS24505 () 49963..50472 - 510 WP_000194542.1 hypothetical protein -
I6J90_RS24510 () 50469..50729 - 261 WP_000371883.1 hypothetical protein -
I6J90_RS24515 () 50831..51570 + 740 Protein_52 IS3 family transposase IS629 Transposase
I6J90_RS24520 () 52243..53751 + 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
I6J90_RS24525 () 53841..54314 + 474 Protein_54 IS3 family transposase IS629 Transposase
I6J90_RS24530 () 54317..54886 - 570 WP_001336919.1 Heat shock protein C VF
I6J90_RS24535 () 54988..55967 + 980 Protein_56 IS5 family transposase ISKpn26 Transposase
I6J90_RS24540 () 56117..56749 - 633 Protein_57 histidine-type phosphatase -
I6J90_RS24545 () 56871..57356 - 486 WP_023910483.1 hypothetical protein -
I6J90_RS24550 () 57381..57866 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
I6J90_RS24555 () 57853..58548 - 696 WP_000117262.1 Putative transposon Tn552 DNA-invertase bin3 VF
I6J90_RS24560 () 58553..59683 - 1131 WP_000729218.1 ABC transporter permease -
I6J90_RS24565 () 59673..60956 - 1284 WP_000964653.1 ABC transporter permease -
I6J90_RS24570 () 60959..62338 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
I6J90_RS24575 () 62442..62969 - 528 WP_000178050.1 iron transporter -
I6J90_RS24580 () 63010..64896 - 1887 WP_122998458.1 FTR1 family iron permease -
I6J90_RS24585 () 65243..66058 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
I6J90_RS24590 () 66196..66900 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
I6J90_RS24595 () 66952..67044 - 93 Protein_68 EAL domain-containing protein -
I6J90_RS24600 () 67247..68260 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
I6J90_RS24605 () 68418..68891 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
I6J90_RS24610 () 69022..69810 + 789 WP_000503573.1 hypothetical protein ARG
I6J90_RS24615 () 70016..70363 + 348 WP_000679427.1 Spermidine export protein MdtJ ARG
I6J90_RS24620 () 70357..71196 + 840 WP_000259031.1 hypothetical protein ARG
I6J90_RS24625 () 71324..71527 + 204 WP_000376616.1 hypothetical protein -
I6J90_RS24630 () 71683..72888 + 1206 WP_000184001.1 chromate efflux transporter -
I6J90_RS24635 () 72899..73204 + 306 WP_000130000.1 hypothetical protein Relaxase
I6J90_RS24640 () 73248..73313 + 66 Protein_77 EAL domain-containing protein -
I6J90_RS24645 () 73431..74195 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
I6J90_RS24650 () 74688..75272 - 585 WP_001137892.1 TetR family transcriptional regulator -
I6J90_RS24655 () 75272..76510 - 1239 WP_000004159.1 MFS transporter -
I6J90_RS24660 () 76507..77412 - 906 WP_000219391.1 hypothetical protein ARG
I6J90_RS24665 () 77534..78238 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
I6J90_RS24670 () 78303..79388 - 1086 Protein_83 transposase -
I6J90_RS24675 () 79463..80131 - 669 WP_001300294.1 hypothetical protein VF
I6J90_RS24680 () 80167..80403 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
I6J90_RS24685 () 80400..80762 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
I6J90_RS24690 () 80780..82474 - 1695 WP_000105636.1 mercury(II) reductase -
I6J90_RS24695 () 82526..82948 - 423 WP_001340589.1 organomercurial transporter MerC -
I6J90_RS24700 () 82984..83259 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
I6J90_RS24705 () 83273..83623 - 351 WP_001294663.1 mercuric transport protein MerT -
I6J90_RS24710 () 83695..84129 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
I6J90_RS24715 () 84236..84933 - 698 Protein_92 IS1 family transposase IS1R Transposase
I6J90_RS24720 () 85182..85583 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
I6J90_RS24725 () 85516..85773 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
I6J90_RS24730 () 85866..86519 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
I6J90_RS24735 () 86617..86757 - 141 WP_001333237.1 hypothetical protein -
I6J90_RS24740 () 87458..88315 - 858 WP_001537577.1 incFII family plasmid replication initiator RepA -
I6J90_RS24745 () 88308..88382 - 75 WP_001365705.1 RepA leader peptide Tap -
I6J90_RS24750 () 88616..88873 - 258 WP_000084404.1 replication regulatory protein RepA -
I6J90_RS24755 () 89158..89307 - 150 WP_001336447.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 89355..89411 + 57 NuclAT_1 - Antitoxin Detail
- () 89355..89411 + 57 NuclAT_1 - Antitoxin Detail
- () 89355..89411 + 57 NuclAT_1 - Antitoxin Detail
- () 89355..89411 + 57 NuclAT_1 - Antitoxin Detail
I6J90_RS24760 () 89506..89943 - 438 WP_000872609.1 hypothetical protein -
I6J90_RS24765 () 90096..90479 - 384 WP_001109264.1 hypothetical protein -
I6J90_RS24770 () 90582..91043 - 462 WP_000760080.1 thermonuclease family protein -
I6J90_RS24775 () 91796..91999 - 204 WP_001336517.1 hypothetical protein -
I6J90_RS24780 () 92151..92708 - 558 WP_000139329.1 fertility inhibition protein FinO -
I6J90_RS24785 () 92763..93509 - 747 WP_000205709.1 conjugal transfer pilus acetylase TraX -
I6J90_RS24790 () 93529..98799 - 5271 WP_001545323.1 Multifunctional conjugation protein TraI Relaxase
I6J90_RS24795 () 98799..101105 - 2307 WP_124056528.1 Protein PsiB VF
I6J90_RS24800 () 101156..101893 - 738 WP_000199901.1 hypothetical protein -
I6J90_RS24805 () 102096..102827 - 732 WP_000850422.1 complement resistance protein TraT -
I6J90_RS24810 () 102859..103356 - 498 WP_000605862.1 entry exclusion protein -
I6J90_RS24815 () 103375..106194 - 2820 WP_001537571.1 conjugal transfer mating pair stabilization protein TraG -
I6J90_RS24820 () 106191..107564 - 1374 WP_000944331.1 conjugal transfer protein TraH -
I6J90_RS24825 () 107551..107976 - 426 WP_001336804.1 F-type conjugal transfer protein TrbF -
I6J90_RS24830 () 107897..108271 - 375 WP_204147728.1 P-type conjugative transfer protein TrbJ -
I6J90_RS24835 () 108201..108746 - 546 WP_000059830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
I6J90_RS24840 () 108733..109017 - 285 WP_000624194.1 type-F conjugative transfer system pilin chaperone TraQ -
I6J90_RS24845 () 109098..109358 + 261 WP_000736412.1 hypothetical protein -
I6J90_RS24850 () 109414..109755 - 342 WP_000556795.1 conjugal transfer protein TrbA -
I6J90_RS24855 () 109769..110512 - 744 WP_001030371.1 type-F conjugative transfer system pilin assembly protein TraF -
I6J90_RS24860 () 110505..110762 - 258 WP_000864310.1 conjugal transfer protein TrbE -
I6J90_RS24865 () 110789..112639 - 1851 WP_125118040.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
I6J90_RS24870 () 112636..113058 - 423 WP_001229309.1 HNH endonuclease -
I6J90_RS24875 () 113083..113454 - 372 WP_000174465.1 hypothetical protein -
I6J90_RS24880 () 113451..114089 - 639 WP_000087539.1 type-F conjugative transfer system pilin assembly protein TrbC -
I6J90_RS24885 () 114116..114634 - 519 WP_000009088.1 hypothetical protein -
I6J90_RS24890 () 114697..115005 - 309 WP_000412445.1 hypothetical protein -
I6J90_RS24895 () 115032..116024 - 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
I6J90_RS24900 () 116021..116653 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
I6J90_RS24905 () 116650..117036 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
I6J90_RS24910 () 117033..119663 - 2631 WP_000069771.1 type IV secretion system protein TraC -
I6J90_RS24915 () 120328..120801 - 474 WP_000549566.1 hypothetical protein -
I6J90_RS24920 () 120794..121207 - 414 WP_000549574.1 hypothetical protein -
I6J90_RS24925 () 121200..121421 - 222 WP_001278695.1 conjugal transfer protein TraR -
I6J90_RS24930 () 121556..122071 - 516 WP_000809872.1 type IV conjugative transfer system lipoprotein TraV -
I6J90_RS24935 () 122071..122421 - 351 WP_071586941.1 conjugal transfer protein TrbD -
I6J90_RS24940 () 122375..122962 - 588 WP_001309238.1 conjugal transfer protein TraP -
I6J90_RS24945 () 122931..124382 - 1452 WP_000146663.1 conjugal transfer protein TraB -
I6J90_RS24950 () 124382..125086 - 705 WP_149013885.1 type-F conjugative transfer system secretin TraK -
I6J90_RS24955 () 125097..125663 - 567 Protein_140 type IV conjugative transfer system protein TraE -
I6J90_RS24960 () 125685..125996 - 312 WP_000012100.1 type IV conjugative transfer system protein TraL -
I6J90_RS24965 () 126011..126370 - 360 WP_001099001.1 type IV conjugative transfer system pilin TraA -
I6J90_RS24970 () 126403..126798 - 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
I6J90_RS24975 () 126897..127586 - 690 WP_000283387.1 conjugal transfer transcriptional regulator TraJ -
I6J90_RS24980 () 127773..128156 - 384 WP_001151538.1 relaxosome protein TraM -
I6J90_RS24985 () 128477..129079 + 603 Protein_146 hypothetical protein VF
I6J90_RS24990 () 129376..130197 - 822 WP_001234445.1 DUF945 domain-containing protein -
I6J90_RS24995 () 130307..130603 - 297 WP_001272251.1 hypothetical protein -
I6J90_RS25000 () 130995..131199 + 205 Protein_149 pilus protein -
I6J90_RS25005 () 131500..131658 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 131702..131926 - 225 NuclAT_0 - Antitoxin Detail
- () 131702..131926 - 225 NuclAT_0 - Antitoxin Detail
- () 131702..131926 - 225 NuclAT_0 - Antitoxin Detail
- () 131702..131926 - 225 NuclAT_0 - Antitoxin Detail
I6J90_RS25010 () 131738..131917 + 180 WP_001309233.1 hypothetical protein -
I6J90_RS25015 () 131938..132657 - 720 WP_001276217.1 plasmid SOS inhibition protein A -
I6J90_RS25020 () 132654..133088 - 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
I6J90_RS25025 () 133157..135121 - 1965 WP_204147729.1 ParB/RepB/Spo0J family partition protein -
I6J90_RS25030 () 135182..135415 - 234 WP_000006003.1 DUF905 family protein -
I6J90_RS25035 () 135473..136000 - 528 WP_000290834.1 single-stranded DNA-binding protein -
I6J90_RS25040 () 136831..137394 - 564 WP_001309257.1 class I SAM-dependent methyltransferase -
I6J90_RS25045 () 137441..138802 - 1362 WP_000170705.1 DUF3560 domain-containing protein -
I6J90_RS25050 () 138854..139084 - 231 WP_001537563.1 hypothetical protein -
I6J90_RS25055 () 139765..140073 + 309 WP_050576143.1 hypothetical protein -
I6J90_RS25060 () 140052..140243 - 192 WP_001027049.1 hypothetical protein -
I6J90_RS25065 () 140243..140662 - 420 WP_000271761.1 DUF1380 family protein -
I6J90_RS25070 () 140709..141011 - 303 WP_001364029.1 antirestriction protein -
I6J90_RS25075 () 141548..142318 - 771 WP_001044390.1 hypothetical protein -
I6J90_RS25080 () 142363..142797 - 435 WP_000274451.1 DUF1380 family protein -
I6J90_RS25085 () 142811..143032 - 222 WP_001104892.1 hypothetical protein -
I6J90_RS25090 () 143033..143716 - 684 WP_000086171.1 DNA methylase -
I6J90_RS25095 () 143792..144103 - 312 WP_001309256.1 hypothetical protein -
I6J90_RS25100 () 144167..144526 - 360 WP_001336695.1 DUF1281 domain-containing protein -
I6J90_RS25105 () 144533..144676 - 144 WP_000270807.1 DUF1281 domain-containing protein -
I6J90_RS25110 () 144843..145619 - 777 Protein_171 hypothetical protein -
I6J90_RS25115 () 145853..146815 - 963 WP_000756328.1 ParB/RepB/Spo0J family partition protein -
I6J90_RS25120 () 146812..148017 - 1206 WP_000817635.1 Plasmid partition protein A VF
I6J90_RS25125 () 148775..149026 + 252 WP_001132895.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
I6J90_RS25130 () 149023..149310 + 288 WP_001270422.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
I6J90_RS25135 () 149312..149723 + 412 Protein_176 DDE-type integrase/transposase/recombinase -
I6J90_RS25140 () 150367..151344 + 978 WP_001309253.1 RepB family plasmid replication initiator protein -
I6J90_RS25145 () 151587..152327 - 741 WP_001066947.1 IS91 family transposase ISMno23 Transposase
I6J90_RS25150 () 152448..152636 - 189 WP_001332784.1 hypothetical protein -
I6J90_RS25155 () 153003..154172 + 1170 WP_001072358.1 hypothetical protein -
I6J90_RS25160 () 154398..154573 - 176 Protein_181 IS3 family transposase -
I6J90_RS25165 () 155019..155291 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
I6J90_RS25170 () 155816..156252 - 437 Protein_183 IS3 family transposase IS2 Transposase
I6J90_RS25175 () 156342..156821 - 480 Protein_184 IS3 family transposase IS629 Transposase
I6J90_RS25180 () 156905..158413 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
I6J90_RS25185 () 159086..159825 - 740 Protein_186 IS3 family transposase IS629 Transposase
I6J90_RS25190 () 159880..160128 - 249 Protein_187 IS21 family transposase IS21 Transposase
I6J90_RS25195 () 160611..161363 + 753 WP_000471454.1 Chaperone protein caf1M VF
I6J90_RS25200 () 161426..163942 + 2517 WP_162929852.1 F1 capsule-anchoring protein VF
I6J90_RS25205 () 163958..164380 + 423 WP_000243157.1 Protein AfaD VF
I6J90_RS25210 () 164488..164973 + 486 WP_001545321.1 Dr family adhesin structural subunit -
I6J90_RS25215 () 165377..165793 + 417 WP_000466682.1 SdiA-regulated domain-containing protein -
I6J90_RS25220 () 165998..166789 - 792 WP_000456855.1 HTH-type transcriptional activator RhaR VF
I6J90_RS25225 () 167111..167616 + 506 Protein_194 IS3 family transposase IS3H Transposase
I6J90_RS25230 () 167609..167722 + 114 Protein_195 transposase -
I6J90_RS25235 () 167872..168315 + 444 Protein_196 ABC transporter substrate-binding protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance