MGE detailed information
MGE type: Prophage MGE length: 28934 bp
Accession: NZ_CP069386 Location: 35060..63993 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Accession: NZ_CP069386 Location: 35060..63993 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSW75_RS00150 (30566) | 30566..32092 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| JSW75_RS00155 (32129) | 32129..33574 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| JSW75_RS00160 (33574) | 33574..34884 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| JSW75_RS00165 (35060) | 35060..35968 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| JSW75_RS00170 (36298) | 36298..36861 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| JSW75_RS00175 (36882) | 36882..38114 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| JSW75_RS00180 (38308) | 38308..38355 | + | 48 | WP_211180494.1 | protein YnaN | - |
| JSW75_RS00185 (38369) | 38369..39352 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| JSW75_RS00190 (39830) | 39830..41203 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| JSW75_RS00195 (41332) | 41332..42267 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| JSW75_RS00200 (42319) | 42319..43554 | - | 1236 | WP_000040852.1 | site-specific integrase | - |
| JSW75_RS00205 (43556) | 43556..43771 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (43875) | 43875..44053 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (43875) | 43875..44053 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (43875) | 43875..44053 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (43875) | 43875..44053 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| JSW75_RS00210 (43850) | 43850..44059 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| JSW75_RS00215 (44052) | 44052..44246 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| JSW75_RS00220 (44303) | 44303..45112 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| JSW75_RS00225 (45105) | 45105..47705 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| JSW75_RS00230 (47807) | 47807..48082 | - | 276 | WP_000632297.1 | protein RacC | - |
| JSW75_RS00235 (48157) | 48157..48327 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| JSW75_RS00240 (48327) | 48327..48548 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| JSW75_RS00245 (48990) | 48990..49478 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| JSW75_RS00250 (49475) | 49475..49630 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| JSW75_RS00255 (50084) | 50084..50560 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| JSW75_RS00260 (50684) | 50684..50980 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| JSW75_RS00265 (51003) | 51003..51425 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| JSW75_RS00270 (51438) | 51438..52295 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| JSW75_RS00275 (52302) | 52302..53048 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| JSW75_RS00280 (53071) | 53071..53523 | + | 453 | Protein_55 | DUF1627 domain-containing protein | - |
| JSW75_RS00285 (53719) | 53719..53904 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| JSW75_RS00290 (54101) | 54101..55558 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| JSW75_RS00295 (55696) | 55696..55959 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| JSW75_RS00300 (55940) | 55940..56299 | + | 360 | WP_000091628.1 | protein YdaY | - |
| JSW75_RS00305 (56773) | 56773..57705 | + | 933 | Protein_60 | phage tail length tape measure family protein | - |
| JSW75_RS00310 (57708) | 57708..57923 | + | 216 | Protein_61 | Ail/Lom family outer membrane beta-barrel protein | - |
| JSW75_RS00315 (58065) | 58065..59045 | - | 981 | WP_000019448.1 | IS5-like element ISKpn26 family transposase | - |
| JSW75_RS00320 (59115) | 59115..59303 | + | 189 | Protein_63 | Ail/Lom family outer membrane beta-barrel protein | - |
| JSW75_RS00325 (59368) | 59368..62730 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JSW75_RS00330 (62730) | 62730..63305 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| JSW75_RS00335 (63403) | 63403..63993 | - | 591 | WP_000086527.1 | recombinase family protein | - |
| JSW75_RS00340 (64310) | 64310..64543 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| JSW75_RS00345 (64612) | 64612..64725 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| JSW75_RS00350 (65065) | 65065..65238 | + | 174 | WP_001157926.1 | hypothetical protein | - |
| JSW75_RS00355 (65504) | 65504..65938 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| JSW75_RS00360 (66079) | 66079..67212 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0.008 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0.008 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0.008 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0.008 |