MGE detailed information
MGE type: Prophage MGE length: 8693 bp
Accession: NZ_CP069381 Location: 307925..316617 Organism: Salmonella enterica strain GSJ/2016-Sal-016 Replicon: chromosome
Accession: NZ_CP069381 Location: 307925..316617 Organism: Salmonella enterica strain GSJ/2016-Sal-016 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSR10_RS01370 (303730) | 303730..304833 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| JSR10_RS01375 (304916) | 304916..305050 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| JSR10_RS01380 (305028) | 305028..305411 | - | 384 | WP_023137707.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| JSR10_RS01385 (305833) | 305833..306942 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| JSR10_RS01390 (307002) | 307002..307928 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| JSR10_RS01395 (307925) | 307925..309202 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| JSR10_RS01400 (309199) | 309199..309966 | + | 768 | WP_000082080.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| JSR10_RS01405 (309968) | 309968..310681 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| JSR10_RS01410 (310813) | 310813..311034 | + | 222 | WP_001599562.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JSR10_RS01415 (311031) | 311031..311399 | + | 369 | WP_000174965.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JSR10_RS01420 (311658) | 311658..312974 | + | 1317 | WP_000624749.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| JSR10_RS01425 (313079) | 313079..313966 | + | 888 | WP_000094074.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| JSR10_RS01430 (313963) | 313963..314808 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| JSR10_RS01435 (314810) | 314810..315880 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| JSR10_RS01440 (315877) | 315877..316617 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| JSR10_RS01445 (316630) | 316630..317046 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| JSR10_RS01450 (317172) | 317172..318914 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| JSR10_RS01455 (318959) | 318959..319993 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| JSR10_RS01460 (319990) | 319990..320961 | - | 972 | WP_023181073.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.007 |