MGE detailed information
MGE type: Prophage MGE length: 10744 bp
Accession: NZ_CP068696 Location: 782608..793351 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 Replicon: chromosome
Accession: NZ_CP068696 Location: 782608..793351 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKV46_RS03795 (778028) | 778028..779083 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| JKV46_RS03800 (779329) | 779329..780183 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| JKV46_RS03805 (780505) | 780505..781608 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| JKV46_RS03810 (781691) | 781691..781825 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| JKV46_RS03815 (781803) | 781803..782186 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| JKV46_RS03820 (782608) | 782608..783717 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| JKV46_RS03825 (783777) | 783777..784703 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| JKV46_RS03830 (784700) | 784700..785977 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| JKV46_RS03835 (785974) | 785974..786741 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JKV46_RS03840 (786743) | 786743..787456 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| JKV46_RS03845 (787588) | 787588..787809 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JKV46_RS03850 (787806) | 787806..788174 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JKV46_RS03855 (788433) | 788433..789749 | + | 1317 | WP_105907555.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| JKV46_RS03860 (789813) | 789813..790700 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| JKV46_RS03865 (790697) | 790697..791542 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| JKV46_RS03870 (791544) | 791544..792614 | + | 1071 | WP_000907838.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JKV46_RS03875 (792611) | 792611..793351 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| JKV46_RS03880 (793364) | 793364..793780 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| JKV46_RS03885 (793906) | 793906..795648 | + | 1743 | WP_070130146.1 | gamma-glutamyltransferase | - |
| JKV46_RS03890 (795693) | 795693..796727 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| JKV46_RS03895 (796724) | 796724..797695 | - | 972 | WP_001038951.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.006 |