MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122799 bp
Accession: NZ_CP068091 Location: 1..122799 Organism: Shigella boydii strain FDAARGOS_1139 Replicon: plasmid unnamed1
Accession: NZ_CP068091 Location: 1..122799 Organism: Shigella boydii strain FDAARGOS_1139 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I96_RS22235 () | 222..593 | - | 372 | Protein_1 | IS21 family transposase IS100 | Transposase |
| I6I96_RS22240 () | 592..959 | + | 368 | Protein_2 | transposase | - |
| I6I96_RS22250 () | 2397..3565 | + | 1169 | WP_135186330.1 | IS3 family transposase | - |
| I6I96_RS22255 () | 3761..3916 | + | 156 | Protein_5 | IS256 family transposase ISEc39 | Transposase |
| I6I96_RS22260 () | 3946..5673 | - | 1728 | WP_000597721.1 | hypothetical protein | VF |
| I6I96_RS22265 () | 6065..6333 | - | 269 | Protein_7 | hypothetical protein | VF |
| I6I96_RS22270 () | 6480..6623 | - | 144 | Protein_8 | IS1 family transposase | - |
| I6I96_RS22275 () | 6981..7133 | - | 153 | WP_011114782.1 | hypothetical protein | - |
| I6I96_RS22280 () | 7172..7695 | + | 524 | Protein_10 | IS3 family transposase ISSfl11 | Transposase |
| I6I96_RS22285 () | 7738..8947 | - | 1210 | Protein_11 | IS3 family transposase IS629 | Transposase |
| I6I96_RS22290 () | 8999..10723 | - | 1725 | WP_011379068.1 | hypothetical protein | VF |
| I6I96_RS22295 () | 11151..12848 | - | 1698 | WP_011379069.1 | hypothetical protein | VF |
| I6I96_RS22300 () | 13178..13357 | + | 180 | Protein_14 | transposase | - |
| I6I96_RS22305 () | 13374..14064 | - | 691 | Protein_15 | IS1 family transposase | - |
| I6I96_RS22310 () | 14258..15289 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| I6I96_RS22315 () | 15404..16248 | - | 845 | Protein_17 | IS5 family transposase ISSfl7 | Transposase |
| I6I96_RS22320 () | 16425..16715 | - | 291 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| I6I96_RS22325 () | 16729..18075 | - | 1347 | WP_011379070.1 | IS4 family transposase IS4 | Transposase |
| I6I96_RS22330 () | 18142..19071 | - | 930 | Protein_20 | IS91 family transposase ISSbo1 | Transposase |
| I6I96_RS22335 () | 19052..19324 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| I6I96_RS22340 () | 19491..19610 | - | 120 | Protein_22 | IS66 family transposase ISCro1 | Transposase |
| I6I96_RS22345 () | 19727..21424 | - | 1698 | WP_005006403.1 | hypothetical protein | VF |
| I6I96_RS22350 () | 21500..21648 | + | 149 | Protein_24 | IS1 family transposase | - |
| I6I96_RS22355 () | 21752..23164 | - | 1413 | WP_001026856.1 | hypothetical protein | VF |
| I6I96_RS22360 () | 23615..23677 | + | 63 | Protein_26 | IS66 family transposase ISCro1 | Transposase |
| I6I96_RS22365 () | 23698..23919 | - | 222 | Protein_27 | IS66 family transposase ISCro1 | Transposase |
| I6I96_RS22370 () | 24062..24412 | - | 351 | WP_171525606.1 | HNH endonuclease | - |
| I6I96_RS22375 () | 24871..26046 | - | 1176 | WP_001020414.1 | hypothetical protein | VF |
| I6I96_RS22380 () | 26115..28376 | - | 2262 | WP_001100761.1 | TonB-dependent receptor | - |
| I6I96_RS22385 () | 28545..29321 | - | 777 | WP_000981089.1 | energy transducer TonB | - |
| I6I96_RS22390 () | 29329..30204 | - | 876 | WP_001224619.1 | ChaN family lipoprotein | - |
| I6I96_RS22395 () | 30481..30696 | + | 216 | Protein_33 | IS91 family transposase | - |
| I6I96_RS22400 () | 30763..32109 | + | 1347 | WP_000483764.1 | IS4 family transposase IS4 | Transposase |
| I6I96_RS22405 () | 32123..32413 | + | 291 | Protein_35 | IS91 family transposase ISSbo1 | Transposase |
| I6I96_RS22410 () | 32586..32681 | - | 96 | Protein_36 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I96_RS22415 () | 32681..32764 | - | 84 | Protein_37 | CopG family transcriptional regulator | - |
| I6I96_RS22420 () | 32794..33123 | - | 330 | Protein_38 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| I6I96_RS22425 () | 33208..33573 | + | 366 | WP_000124126.1 | hypothetical protein | - |
| I6I96_RS22430 () | 33573..34760 | + | 1188 | WP_024258531.1 | IS91 family transposase ISEc37 | Transposase |
| I6I96_RS22435 () | 35297..35584 | - | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| I6I96_RS22440 () | 35584..35895 | - | 312 | WP_000483533.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I96_RS22445 () | 36360..37556 | + | 1197 | WP_004983157.1 | IS110 family transposase ISEc20 | Transposase |
| I6I96_RS22450 () | 37789..38486 | + | 698 | Protein_44 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22455 () | 38704..38970 | - | 267 | WP_000957717.1 | hypothetical protein | VF |
| I6I96_RS22460 () | 39152..39550 | - | 399 | Protein_46 | IS3 family transposase ISEc48 | Transposase |
| I6I96_RS22465 () | 39873..41000 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| I6I96_RS22470 () | 41130..41413 | - | 284 | Protein_48 | transposase | - |
| I6I96_RS22480 () | 42977..43246 | - | 270 | Protein_50 | IS3 family transposase ISEc48 | Transposase |
| I6I96_RS22485 () | 43414..44626 | - | 1213 | Protein_51 | IS3 family transposase | - |
| I6I96_RS22490 () | 44678..44938 | + | 261 | Protein_52 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22495 () | 44978..45097 | - | 120 | Protein_53 | transposase domain-containing protein | - |
| I6I96_RS22500 () | 45323..46915 | - | 1593 | WP_001072385.1 | IS66 family transposase ISEc43 | Transposase |
| I6I96_RS22505 () | 46946..47296 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| I6I96_RS22510 () | 47293..47589 | - | 297 | WP_072072579.1 | IS66 family transposase IS682 | Transposase |
| I6I96_RS22515 () | 47676..48844 | + | 1169 | WP_134810631.1 | IS3 family transposase | - |
| I6I96_RS22520 () | 48956..49150 | - | 195 | WP_000872577.1 | hypothetical protein | - |
| I6I96_RS22525 () | 49529..49747 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| I6I96_RS22530 () | 49749..50054 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| I6I96_RS22535 () | 50078..50185 | + | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| I6I96_RS22540 () | 50447..52084 | + | 1638 | WP_039060807.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| I6I96_RS22545 () | 52292..52561 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| I6I96_RS22550 () | 52558..52730 | + | 173 | Protein_64 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I96_RS22555 () | 52794..53491 | - | 698 | Protein_65 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22560 () | 53698..53814 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| I6I96_RS22565 () | 54178..55020 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| I6I96_RS22570 () | 55023..56111 | + | 1089 | WP_005059238.1 | putative hexosyltransferase CapU | - |
| I6I96_RS22575 () | 56116..57066 | + | 951 | WP_005059240.1 | virulence factor VirK | - |
| I6I96_RS22580 () | 57131..58075 | + | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| I6I96_RS22585 () | 58229..58900 | - | 672 | Protein_71 | IS630 family transposase IS630 | Transposase |
| I6I96_RS22590 () | 58916..59613 | - | 698 | Protein_72 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22595 () | 59669..60142 | + | 474 | Protein_73 | conjugal transfer protein TraD | - |
| I6I96_RS22600 () | 60151..60549 | - | 399 | WP_000911318.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| I6I96_RS22605 () | 60549..60776 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| I6I96_RS22610 () | 60861..61277 | + | 417 | WP_171548060.1 | hypothetical protein | Relaxase |
| I6I96_RS22615 () | 61264..66135 | + | 4872 | WP_039060816.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6I96_RS22620 () | 66155..66901 | + | 747 | WP_000205722.1 | conjugal transfer pilus acetylase TraX | - |
| I6I96_RS22625 () | 66956..67516 | + | 561 | WP_005056178.1 | fertility inhibition protein FinO | - |
| I6I96_RS22630 () | 67647..67859 | + | 213 | WP_011379083.1 | ANR family transcriptional regulator | - |
| I6I96_RS22635 () | 68103..68564 | + | 462 | WP_001233866.1 | thermonuclease family protein | - |
| I6I96_RS22640 () | 68610..68819 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| I6I96_RS22645 () | 68858..69448 | + | 591 | WP_000766820.1 | DUF2726 domain-containing protein | - |
| I6I96_RS22650 () | 69688..69948 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| I6I96_RS22655 () | 70172..70246 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6I96_RS22660 () | 70239..71096 | + | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| I6I96_RS22665 () | 72157..72420 | - | 264 | Protein_87 | IS110 family transposase IS1663 | Transposase |
| I6I96_RS22670 () | 72592..73791 | - | 1200 | WP_000947197.1 | IS91 family transposase | - |
| I6I96_RS22675 () | 73801..73989 | - | 189 | WP_000957844.1 | hypothetical protein | - |
| I6I96_RS22680 () | 74097..74351 | - | 255 | Protein_90 | IS3 family transposase IS1203 | Transposase |
| I6I96_RS22685 () | 74406..74687 | + | 282 | Protein_91 | transposase domain-containing protein | - |
| I6I96_RS22695 () | 76201..77655 | + | 1455 | WP_000701107.1 | hypothetical protein | VF |
| I6I96_RS22700 () | 77794..79002 | - | 1209 | WP_000198550.1 | IS91 family transposase ISSbo1 | Transposase |
| I6I96_RS22705 () | 78983..79255 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| I6I96_RS22710 () | 79527..79829 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| I6I96_RS22715 () | 79820..80302 | + | 483 | WP_000405246.1 | GNAT family N-acetyltransferase | Toxin Detail |
| I6I96_RS22720 () | 80370..80893 | + | 524 | Protein_98 | IS3 family transposase ISSfl11 | Transposase |
| I6I96_RS22725 () | 80936..81274 | - | 339 | Protein_99 | IS3 family transposase IS629 | Transposase |
| I6I96_RS22730 () | 81348..82516 | + | 1169 | WP_094096822.1 | IS3 family transposase | - |
| I6I96_RS22735 () | 82540..83232 | - | 693 | WP_000625262.1 | hypothetical protein | VF |
| I6I96_RS22740 () | 83288..83440 | + | 153 | Protein_102 | IS3 family transposase | - |
| I6I96_RS22745 () | 84821..85768 | + | 948 | WP_005005342.1 | Outer membrane protease IcsP | VF |
| I6I96_RS22750 () | 85737..85904 | - | 168 | WP_000165219.1 | IS3 family transposase IS629 | Transposase |
| I6I96_RS22755 () | 86330..86702 | - | 373 | Protein_105 | IS3 family transposase IS2 | Transposase |
| I6I96_RS22765 () | 88281..88400 | + | 120 | Protein_107 | DUF3440 domain-containing protein | - |
| I6I96_RS22770 () | 88650..89516 | + | 867 | WP_001046942.1 | hypothetical protein | VF |
| I6I96_RS22775 () | 89846..90586 | + | 741 | WP_000850661.1 | PAP2 family phosphatase PhoN2 | - |
| I6I96_RS22780 () | 90939..91119 | - | 181 | Protein_110 | hypothetical protein | VF |
| I6I96_RS22785 () | 91125..91822 | - | 698 | Protein_111 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22790 () | 91879..92288 | - | 410 | Protein_112 | type 3 secretion system effector OspC4 | - |
| I6I96_RS22800 () | 94015..94533 | - | 519 | Protein_114 | IS66 family transposase IS679 | Transposase |
| I6I96_RS22805 () | 94550..95235 | - | 686 | Protein_115 | IS3 family transposase ISSfl11 | Transposase |
| I6I96_RS22810 () | 95925..97634 | - | 1710 | WP_004976019.1 | hypothetical protein | VF |
| I6I96_RS22815 () | 98066..98785 | - | 720 | WP_001121865.1 | Phosphothreonine lyase OspF | VF |
| I6I96_RS22820 () | 98910..99473 | - | 564 | Protein_118 | ISL3 family transposase ISKox3 | Transposase |
| I6I96_RS22825 () | 99457..99715 | + | 259 | Protein_119 | IS1 family transposase | - |
| I6I96_RS22830 () | 99824..100402 | - | 579 | WP_000868561.1 | hypothetical protein | - |
| I6I96_RS22835 () | 100823..101060 | - | 238 | Protein_121 | IS21 family transposase IS21 | Transposase |
| I6I96_RS22840 () | 101247..101676 | - | 430 | Protein_122 | IS91 family transposase IS91 | Transposase |
| I6I96_RS22845 () | 101754..102041 | + | 288 | WP_001082156.1 | hypothetical protein | - |
| I6I96_RS22850 () | 102072..102353 | + | 282 | Protein_124 | IS66 family transposase ISCro1 | Transposase |
| I6I96_RS22855 () | 102367..103711 | - | 1345 | Protein_125 | IS4 family transposase IS4 | Transposase |
| I6I96_RS22860 () | 103778..104155 | + | 378 | Protein_126 | IS66 family transposase ISCro1 | Transposase |
| I6I96_RS22865 () | 104155..104502 | + | 348 | WP_000622995.1 | IS66 family transposase ISCro1 | Transposase |
| I6I96_RS22870 () | 104522..105676 | + | 1155 | Protein_128 | IS66 family transposase | - |
| I6I96_RS22875 () | 105680..105839 | + | 160 | Protein_129 | IS3 family transposase | - |
| I6I96_RS22880 () | 106428..106726 | + | 299 | Protein_130 | IS256 family transposase IS1414 | Transposase |
| I6I96_RS22885 () | 106808..106945 | + | 138 | Protein_131 | IS630 family transposase | - |
| I6I96_RS22890 () | 107315..107992 | + | 678 | WP_000026472.1 | hypothetical protein | VF |
| I6I96_RS22895 () | 108316..108426 | + | 111 | Protein_133 | IS3 family transposase | - |
| I6I96_RS22900 () | 108504..108818 | + | 315 | WP_032490754.1 | hypothetical protein | - |
| I6I96_RS22905 () | 109100..109666 | + | 567 | WP_005057975.1 | hypothetical protein | VF |
| I6I96_RS22910 () | 109928..110050 | - | 123 | Protein_136 | transposase domain-containing protein | - |
| I6I96_RS22915 () | 110193..110747 | + | 555 | Protein_137 | IS3 family transposase IS3H | Transposase |
| I6I96_RS22925 () | 112095..112811 | + | 717 | WP_075320866.1 | IS21 family transposase IS100kyp | Transposase |
| I6I96_RS22930 () | 112878..113216 | + | 339 | Protein_140 | IS1 family transposase | - |
| I6I96_RS22935 () | 113538..114737 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| I6I96_RS22940 () | 114737..115717 | + | 981 | WP_000431558.1 | ParB/RepB/Spo0J family partition protein | - |
| I6I96_RS22945 () | 115973..116455 | + | 483 | Protein_143 | IS110 family transposase ISSde4 | Transposase |
| I6I96_RS22950 () | 116509..116663 | - | 155 | Protein_144 | transposase domain-containing protein | - |
| I6I96_RS22955 () | 116746..117924 | - | 1179 | WP_044325982.1 | group II intron reverse transcriptase/maturase | - |
| I6I96_RS22960 () | 117958..118443 | - | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | - |
| I6I96_RS22965 () | 118431..118715 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | - |
| I6I96_RS22970 () | 119388..120556 | + | 1169 | WP_094096843.1 | IS3 family transposase | - |
| I6I96_RS22975 () | 120614..121741 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|