MGE detailed information
MGE type: Conjugative plasmid MGE length: 133299 bp
Accession: NZ_CP068043 Location: 1..133299 Organism: Escherichia coli strain XJW9B277 Replicon: plasmid pXJW9B277-F18
Accession: NZ_CP068043 Location: 1..133299 Organism: Escherichia coli strain XJW9B277 Replicon: plasmid pXJW9B277-F18
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJE78_RS24795 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| JJE78_RS24800 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| JJE78_RS24805 (2070) | 2070..3290 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| JJE78_RS24810 (3448) | 3448..3636 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| JJE78_RS24815 (3835) | 3835..4532 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| JJE78_RS24820 (4549) | 4549..4746 | - | 198 | Protein_5 | colicin V | - |
| JJE78_RS24825 (4724) | 4724..4960 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| JJE78_RS24830 (5502) | 5502..5705 | - | 204 | Protein_7 | hypothetical protein | - |
| JJE78_RS24835 (5878) | 5878..6045 | + | 168 | Protein_8 | colicin-B | - |
| JJE78_RS24840 (6063) | 6063..6590 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| JJE78_RS24845 (6834) | 6834..7649 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| JJE78_RS24850 (7699) | 7699..8052 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| JJE78_RS24855 (8230) | 8230..8793 | - | 564 | Protein_12 | IS91 family transposase ISSod25 | Transposase |
| JJE78_RS24860 (8856) | 8856..9560 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JJE78_RS24865 (9689) | 9689..10453 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| JJE78_RS24870 (10946) | 10946..11530 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| JJE78_RS24875 (11530) | 11530..12768 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| JJE78_RS24880 (12765) | 12765..13670 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| JJE78_RS24885 (13792) | 13792..14496 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JJE78_RS24890 (14555) | 14555..14716 | + | 162 | WP_050858800.1 | DUF3330 domain-containing protein | - |
| JJE78_RS24895 (14842) | 14842..15402 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| JJE78_RS24900 (15405) | 15405..18356 | + | 2952 | WP_015344976.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| JJE78_RS24905 (18290) | 18290..18766 | + | 477 | WP_223171565.1 | hypothetical protein | - |
| JJE78_RS24910 (18851) | 18851..19555 | - | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| JJE78_RS24915 (19619) | 19619..20449 | + | 831 | Protein_24 | IS91 family transposase ISVsa3 | Transposase |
| JJE78_RS26500 (20480) | 20480..21364 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| JJE78_RS24925 (21581) | 21581..22795 | + | 1215 | WP_000214122.1 | Bicyclomycin resistance protein | ARG |
| JJE78_RS24930 (22823) | 22823..23128 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| JJE78_RS24935 (23240) | 23240..24733 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| JJE78_RS24940 (24969) | 24969..25211 | - | 243 | Protein_29 | phosphoglucosamine mutase | - |
| JJE78_RS24945 (25298) | 25298..26113 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| JJE78_RS24950 (26203) | 26203..27293 | + | 1091 | WP_085940648.1 | IS4 family transposase ISAba1 | Transposase |
| JJE78_RS24955 (27490) | 27490..27975 | - | 486 | WP_006581703.1 | hypothetical protein | - |
| JJE78_RS24965 (28201) | 28201..29724 | - | 1524 | Protein_33 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| JJE78_RS24970 (29786) | 29786..30538 | + | 753 | WP_000602738.1 | IS6 family transposase ISRle7 | Transposase |
| JJE78_RS24975 (30646) | 30646..30885 | - | 240 | Protein_35 | AAC(3) family N-acetyltransferase | - |
| JJE78_RS24980 (30960) | 30960..31985 | - | 1026 | WP_000742814.1 | Hygromycin-B 4-O-kinase | ARG |
| JJE78_RS24985 (32214) | 32214..32990 | - | 777 | WP_001199192.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| JJE78_RS24990 (33104) | 33104..33808 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JJE78_RS24995 (34111) | 34111..34986 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| JJE78_RS25000 (35021) | 35021..35338 | + | 318 | Protein_40 | IS5 family transposase IS903B | Transposase |
| JJE78_RS25005 (35598) | 35598..36014 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| JJE78_RS25010 (36019) | 36019..36537 | - | 519 | WP_014839979.1 | FidL-like protein | - |
| JJE78_RS25015 (36537) | 36537..37283 | - | 747 | WP_071448054.1 | winged helix-turn-helix domain-containing protein | - |
| JJE78_RS25020 (37289) | 37289..37993 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JJE78_RS25025 (38059) | 38059..39573 | + | 1515 | Protein_45 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JJE78_RS25030 (39631) | 39631..39873 | + | 243 | WP_000844627.1 | transposase | - |
| JJE78_RS25035 (39905) | 39905..40555 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JJE78_RS25040 (40661) | 40661..41860 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| JJE78_RS25045 (41892) | 41892..42776 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| JJE78_RS25050 (42914) | 42914..43306 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| JJE78_RS25055 (43310) | 43310..45061 | + | 1752 | Protein_51 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JJE78_RS25065 (45171) | 45171..45449 | + | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | - |
| JJE78_RS25070 (45495) | 45495..46343 | + | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
| JJE78_RS25075 (46460) | 46460..46942 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| JJE78_RS25080 (47244) | 47244..47591 | + | 348 | WP_000142450.1 | DUF6404 family protein | - |
| JJE78_RS25085 (47609) | 47609..47794 | - | 186 | Protein_56 | hypothetical protein | - |
| JJE78_RS25090 (48020) | 48020..51835 | + | 3816 | WP_228607228.1 | hypothetical protein | - |
| JJE78_RS25095 (52367) | 52367..52717 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| JJE78_RS25100 (52761) | 52761..53450 | + | 690 | WP_000796228.1 | hypothetical protein | - |
| JJE78_RS26505 (53447) | 53447..53683 | + | 237 | Protein_60 | phage integrase family protein | - |
| JJE78_RS25105 (53736) | 53736..54440 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JJE78_RS25110 (54497) | 54497..54829 | - | 333 | Protein_62 | IS6 family transposase IS15 | Transposase |
| JJE78_RS25115 (54823) | 54823..55170 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| JJE78_RS25120 (55287) | 55287..56125 | - | 839 | Protein_64 | Streptomycin 3''-adenylyltransferase | ARG |
| JJE78_RS25125 (56131) | 56131..56421 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| JJE78_RS25130 (56533) | 56533..57030 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| JJE78_RS25135 (57175) | 57175..58188 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| JJE78_RS25140 (58391) | 58391..58591 | + | 201 | Protein_68 | DUF3330 domain-containing protein | - |
| JJE78_RS25145 (58645) | 58645..59349 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JJE78_RS25150 (59652) | 59652..60512 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JJE78_RS25155 (60662) | 60662..60760 | - | 99 | Protein_71 | IS1 family transposase | - |
| JJE78_RS25160 (60789) | 60789..62099 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| JJE78_RS25165 (62384) | 62384..62785 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JJE78_RS25170 (62718) | 62718..62975 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JJE78_RS25175 (63068) | 63068..63721 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| JJE78_RS25180 (64660) | 64660..65517 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| JJE78_RS25185 (65510) | 65510..65992 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| JJE78_RS26510 (65985) | 65985..66032 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| JJE78_RS26515 (66023) | 66023..66274 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| JJE78_RS25195 (66291) | 66291..66548 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| JJE78_RS25200 (66832) | 66832..66981 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (67025) | 67025..67086 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (67025) | 67025..67086 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (67025) | 67025..67086 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (67025) | 67025..67086 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| JJE78_RS25205 (67342) | 67342..67416 | - | 75 | Protein_82 | endonuclease | - |
| JJE78_RS25210 (67662) | 67662..67874 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| JJE78_RS25215 (68010) | 68010..68570 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| JJE78_RS25220 (68673) | 68673..69533 | - | 861 | WP_000704514.1 | putative protein YcjY | VF |
| JJE78_RS25225 (69592) | 69592..70338 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| JJE78_RS25230 (70358) | 70358..75628 | - | 5271 | WP_216775793.1 | Multifunctional conjugation protein TraI | Relaxase |
| JJE78_RS25235 (75710) | 75710..75937 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JJE78_RS25240 (75937) | 75937..76335 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JJE78_RS25245 (76344) | 76344..78497 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| JJE78_RS25250 (78593) | 78593..79270 | + | 678 | WP_048217701.1 | IS66 family transposase ISCro1 | Transposase |
| JJE78_RS25255 (79270) | 79270..79617 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JJE78_RS25260 (79637) | 79637..81208 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| JJE78_RS25265 (81457) | 81457..82188 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| JJE78_RS25270 (82220) | 82220..82717 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| JJE78_RS25275 (82733) | 82733..85555 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JJE78_RS25280 (85552) | 85552..86925 | - | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| JJE78_RS25285 (86925) | 86925..87305 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| JJE78_RS25290 (87292) | 87292..87633 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| JJE78_RS25295 (87563) | 87563..88108 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JJE78_RS25300 (88095) | 88095..88379 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JJE78_RS25305 (88460) | 88460..88774 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| JJE78_RS25310 (88776) | 88776..89123 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| JJE78_RS25315 (89139) | 89139..89882 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JJE78_RS25320 (89875) | 89875..90132 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| JJE78_RS25325 (90159) | 90159..91967 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JJE78_RS25330 (91964) | 91964..92602 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JJE78_RS25335 (92611) | 92611..93603 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| JJE78_RS25340 (93600) | 93600..94232 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| JJE78_RS25345 (94229) | 94229..94615 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| JJE78_RS25350 (94612) | 94612..97239 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| JJE78_RS25355 (97399) | 97399..97620 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| JJE78_RS25360 (97755) | 97755..98270 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JJE78_RS25365 (98267) | 98267..98518 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| JJE78_RS25370 (98530) | 98530..98727 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| JJE78_RS25375 (98714) | 98714..99304 | - | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JJE78_RS25380 (99294) | 99294..100721 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JJE78_RS25385 (100721) | 100721..101449 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| JJE78_RS25390 (101436) | 101436..102002 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| JJE78_RS25395 (102024) | 102024..102335 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JJE78_RS25400 (102350) | 102350..102715 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| JJE78_RS25405 (102748) | 102748..103149 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| JJE78_RS25410 (103242) | 103242..103931 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| JJE78_RS25415 (104118) | 104118..104501 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JJE78_RS25420 (104822) | 104822..105424 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| JJE78_RS25425 (105721) | 105721..106542 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| JJE78_RS25430 (106660) | 106660..106947 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| JJE78_RS26520 (106972) | 106972..107178 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| JJE78_RS26525 (107248) | 107248..107420 | + | 173 | Protein_129 | hypothetical protein | - |
| JJE78_RS26530 (107418) | 107418..107648 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| JJE78_RS25435 (107868) | 107868..107993 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JJE78_RS26535 (107935) | 107935..108084 | - | 150 | Protein_132 | plasmid maintenance protein Mok | - |
| - (108070) | 108070..108294 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (108070) | 108070..108294 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (108070) | 108070..108294 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (108070) | 108070..108294 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| JJE78_RS25440 (108106) | 108106..108294 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| JJE78_RS25445 (108263) | 108263..109025 | - | 763 | Protein_134 | plasmid SOS inhibition protein A | - |
| JJE78_RS25450 (109022) | 109022..109456 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| JJE78_RS25455 (109511) | 109511..109708 | - | 198 | Protein_136 | hypothetical protein | - |
| JJE78_RS25460 (109736) | 109736..109969 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| JJE78_RS25465 (110037) | 110037..110576 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| JJE78_RS25470 (110602) | 110602..110808 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| JJE78_RS26540 (110878) | 110878..110958 | + | 81 | Protein_140 | hypothetical protein | - |
| JJE78_RS26545 (111141) | 111141..111310 | - | 170 | Protein_141 | hypothetical protein | - |
| JJE78_RS25475 (111947) | 111947..112918 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JJE78_RS25480 (112918) | 112918..114084 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| JJE78_RS25490 (115566) | 115566..117767 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| JJE78_RS25495 (117793) | 117793..119126 | - | 1334 | Protein_146 | L-lysine N6-monooxygenase | VF |
| JJE78_RS25500 (119123) | 119123..120865 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| JJE78_RS25505 (120865) | 120865..121812 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| JJE78_RS25510 (121813) | 121813..123537 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| JJE78_RS25515 (123673) | 123673..124866 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| JJE78_RS25520 (125246) | 125246..125626 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| JJE78_RS25525 (125967) | 125967..126380 | - | 414 | Protein_152 | phosphopyruvate hydratase | - |
| JJE78_RS25530 (126378) | 126378..126635 | + | 258 | Protein_153 | Tn3 family transposase | - |
| JJE78_RS25535 (126869) | 126869..127726 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| JJE78_RS25540 (127723) | 127723..128580 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| JJE78_RS25545 (128577) | 128577..129404 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| JJE78_RS25550 (129404) | 129404..130318 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| JJE78_RS25555 (130674) | 130674..131371 | + | 698 | WP_103215986.1 | IS1 family transposase IS1S | Transposase |
| JJE78_RS25560 (131551) | 131551..132064 | - | 514 | Protein_159 | DUF4113 domain-containing protein | - |
| JJE78_RS25565 (132125) | 132125..132229 | - | 105 | Protein_160 | AAA family ATPase | - |
| JJE78_RS25570 (132231) | 132231..132554 | - | 324 | Protein_161 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|