MGE detailed information
MGE type: Conjugative plasmid MGE length: 126454 bp
Accession: NZ_CP068040 Location: 1..126454 Organism: Escherichia coli strain U90 Replicon: plasmid pU90-5
Accession: NZ_CP068040 Location: 1..126454 Organism: Escherichia coli strain U90 Replicon: plasmid pU90-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKF55_RS25995 () | 324..1049 | + | 726 | WP_063107940.1 | IS3 family transposase ISKpn8 | Transposase |
| JKF55_RS26000 () | 1079..2650 | - | 1572 | WP_100004367.1 | IS66 family transposase ISCro1 | Transposase |
| JKF55_RS26005 () | 2670..3017 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JKF55_RS26010 () | 3017..3694 | - | 678 | WP_052928757.1 | IS66 family transposase ISCro1 | Transposase |
| JKF55_RS26015 () | 3778..3894 | + | 117 | WP_001495116.1 | transposase | - |
| JKF55_RS26020 () | 4084..4302 | - | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| JKF55_RS26025 () | 4810..4959 | + | 150 | Protein_7 | IS3 family transposase ISKpn37 | Transposase |
| JKF55_RS26030 () | 5103..5495 | + | 393 | Protein_8 | transposase | - |
| JKF55_RS26035 () | 5530..5895 | + | 366 | WP_000124135.1 | hypothetical protein | - |
| JKF55_RS26040 () | 5895..7082 | + | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| JKF55_RS26045 () | 7270..7521 | + | 252 | Protein_11 | hypothetical protein | - |
| JKF55_RS26050 () | 7598..8056 | - | 459 | Protein_12 | AAA family ATPase | - |
| JKF55_RS26055 () | 8193..8890 | - | 698 | Protein_13 | IS1 family transposase IS1R | Transposase |
| JKF55_RS26060 () | 9096..9311 | + | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| JKF55_RS26065 () | 9699..10659 | + | 961 | Protein_15 | IS3 family transposase | - |
| JKF55_RS26070 () | 11028..11708 | - | 681 | Protein_16 | IS66 family transposase ISCro1 | Transposase |
| JKF55_RS26075 () | 11797..12162 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| JKF55_RS26080 () | 12162..13349 | + | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| JKF55_RS26085 () | 13626..13991 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| JKF55_RS26090 () | 13991..15178 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| JKF55_RS26095 () | 16171..16868 | + | 698 | Protein_21 | IS1 family transposase IS1X2 | Transposase |
| JKF55_RS26100 () | 17078..18306 | + | 1229 | Protein_22 | IS3 family transposase | - |
| JKF55_RS26105 () | 18789..19301 | + | 513 | WP_001372478.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| JKF55_RS26110 () | 19313..22387 | + | 3075 | WP_039022831.1 | Hemolysin, plasmid | VF |
| JKF55_RS26115 () | 22459..24582 | + | 2124 | WP_000376539.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| JKF55_RS26120 () | 24601..26037 | + | 1437 | WP_000860467.1 | Hemolysin secretion protein D, plasmid | VF |
| JKF55_RS26125 () | 26115..26456 | + | 342 | Protein_27 | IS3 family transposase | - |
| JKF55_RS26130 () | 27047..27607 | + | 561 | Protein_28 | IS91 family transposase IS91 | Transposase |
| JKF55_RS26135 () | 27827..28333 | + | 507 | WP_000939423.1 | thiol peroxidase | - |
| JKF55_RS26140 () | 28553..28786 | - | 234 | WP_071533720.1 | hypothetical protein | - |
| JKF55_RS26145 () | 29289..30104 | + | 816 | WP_000941741.1 | Multiple antibiotic resistance protein MarA | VF |
| JKF55_RS26150 () | 30574..30941 | - | 368 | Protein_32 | IS3 family transposase | - |
| JKF55_RS26155 () | 31122..32024 | - | 903 | WP_063100436.1 | F18 fimbrial adhesin subunit FedF | - |
| JKF55_RS26160 () | 32322..32861 | - | 540 | WP_077249094.1 | F18 fimbrial subunit FedE | - |
| JKF55_RS26165 () | 32824..33516 | - | 693 | WP_001037287.1 | Chaperone protein FaeE | VF |
| JKF55_RS26170 () | 33509..35923 | - | 2415 | WP_000747724.1 | Outer membrane usher protein YraJ | VF |
| JKF55_RS26175 () | 36016..36531 | - | 516 | WP_064769798.1 | Major MR/P fimbria protein | VF |
| JKF55_RS26180 () | 37150..37729 | - | 580 | Protein_38 | transposase | - |
| JKF55_RS26185 () | 37760..37930 | - | 171 | WP_162779668.1 | hypothetical protein | - |
| JKF55_RS26190 () | 37946..38140 | - | 195 | Protein_40 | carbohydrate transporter | - |
| JKF55_RS26195 () | 38225..38590 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| JKF55_RS26200 () | 38590..39777 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| JKF55_RS26205 () | 40563..40646 | + | 84 | WP_000565612.1 | hypothetical protein | - |
| JKF55_RS26210 () | 40801..41445 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JKF55_RS26215 () | 41826..42488 | + | 663 | WP_000516400.1 | peptidyl-arginine deiminase | - |
| JKF55_RS26220 () | 42586..42867 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| JKF55_RS26225 () | 42892..43869 | + | 978 | WP_001269910.1 | hypothetical protein | - |
| JKF55_RS26230 () | 43866..44291 | - | 426 | WP_000202942.1 | hypothetical protein | - |
| JKF55_RS26235 () | 44359..44805 | - | 447 | WP_000057426.1 | hypothetical protein | - |
| JKF55_RS26240 () | 44845..45681 | - | 837 | WP_001050931.1 | replication initiation protein | - |
| JKF55_RS26245 () | 46915..47166 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| JKF55_RS26250 () | 47156..47437 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JKF55_RS26255 () | 47583..47906 | + | 324 | WP_001181907.1 | hypothetical protein | - |
| JKF55_RS26260 () | 47951..48196 | + | 246 | WP_000356545.1 | hypothetical protein | - |
| JKF55_RS26265 () | 48186..48401 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| JKF55_RS26270 () | 48791..49978 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| JKF55_RS26275 () | 49978..50343 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| JKF55_RS26280 () | 50620..51807 | - | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| JKF55_RS26285 () | 51807..52172 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| JKF55_RS26290 () | 52595..53068 | - | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| JKF55_RS26295 () | 54407..54703 | - | 297 | WP_000753309.1 | hypothetical protein | - |
| JKF55_RS26300 () | 55001..55264 | - | 264 | WP_000063165.1 | hypothetical protein | - |
| JKF55_RS26305 () | 55403..56815 | - | 1413 | Protein_63 | topoisomerase C-terminal repeat-containing protein | - |
| JKF55_RS26310 () | 56897..57262 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| JKF55_RS26315 () | 57262..58449 | + | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| JKF55_RS26320 () | 58726..59091 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| JKF55_RS26325 () | 59091..60278 | + | 1188 | WP_201448040.1 | IS91 family transposase ISEc37 | Transposase |
| JKF55_RS26330 () | 60562..60837 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JKF55_RS26335 () | 60837..61121 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JKF55_RS26340 () | 62031..62888 | - | 858 | WP_024233440.1 | incFII family plasmid replication initiator RepA | - |
| JKF55_RS26345 () | 62881..62955 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JKF55_RS26350 () | 63192..63446 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| JKF55_RS26355 () | 63711..63941 | - | 231 | WP_001736714.1 | hypothetical protein | - |
| JKF55_RS26360 () | 64105..64704 | - | 600 | WP_063082122.1 | hypothetical protein | - |
| JKF55_RS26365 () | 65091..65291 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| JKF55_RS26370 () | 65423..65983 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| JKF55_RS26375 () | 66038..66781 | - | 744 | WP_116794645.1 | conjugal transfer pilus acetylase TraX | - |
| JKF55_RS26380 () | 66801..72071 | - | 5271 | WP_116794646.1 | Multifunctional conjugation protein TraI | Relaxase |
| JKF55_RS26385 () | 72071..74296 | - | 2226 | WP_112015154.1 | type IV conjugative transfer system coupling protein TraD | - |
| JKF55_RS26390 () | 74347..75084 | - | 738 | WP_000199911.1 | hypothetical protein | - |
| JKF55_RS26395 () | 75287..76018 | - | 732 | WP_063082137.1 | complement resistance protein TraT | - |
| JKF55_RS26400 () | 76051..76548 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| JKF55_RS26405 () | 76567..79386 | - | 2820 | WP_063082138.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JKF55_RS26410 () | 79383..80756 | - | 1374 | WP_042634326.1 | conjugal transfer protein TraH | - |
| JKF55_RS26415 () | 80743..81168 | - | 426 | WP_072043015.1 | F-type conjugal transfer protein TrbF | - |
| JKF55_RS26420 () | 81122..81463 | - | 342 | WP_071528036.1 | P-type conjugative transfer protein TrbJ | - |
| JKF55_RS26425 () | 81393..81938 | - | 546 | WP_042634328.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JKF55_RS26430 () | 81925..82209 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JKF55_RS26435 () | 82290..82604 | + | 315 | WP_063082139.1 | hypothetical protein | - |
| JKF55_RS26440 () | 82606..82953 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| JKF55_RS26445 () | 82969..83712 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JKF55_RS26450 () | 83705..83962 | - | 258 | WP_064987023.1 | conjugal transfer protein TrbE | - |
| JKF55_RS26455 () | 83989..85797 | - | 1809 | WP_111986947.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JKF55_RS26460 () | 85794..86432 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JKF55_RS26465 () | 86460..86912 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| JKF55_RS26470 () | 86942..87403 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| JKF55_RS26475 () | 87429..88421 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| JKF55_RS26480 () | 88418..89050 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| JKF55_RS26485 () | 89047..89433 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JKF55_RS26490 () | 89430..92057 | - | 2628 | WP_063082140.1 | type IV secretion system protein TraC | - |
| JKF55_RS26495 () | 92217..92438 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| JKF55_RS26500 () | 92573..93088 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JKF55_RS26505 () | 93085..93453 | - | 369 | WP_071588966.1 | conjugal transfer protein TrbD | - |
| JKF55_RS26510 () | 93392..93976 | - | 585 | WP_009424415.1 | conjugal transfer protein TraP | - |
| JKF55_RS26515 () | 93966..95393 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| JKF55_RS26520 () | 95393..96097 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| JKF55_RS26525 () | 96108..96674 | - | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| JKF55_RS26530 () | 96696..97007 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JKF55_RS26535 () | 97012..97374 | - | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| JKF55_RS26540 () | 97408..97647 | - | 240 | WP_042357785.1 | conjugal transfer relaxosome protein TraY | - |
| JKF55_RS26545 () | 97755..98402 | - | 648 | WP_042634329.1 | transcriptional regulator TraJ family protein | - |
| JKF55_RS26550 () | 98594..98977 | - | 384 | WP_001151530.1 | relaxosome protein TraM | - |
| JKF55_RS26555 () | 99391..99900 | + | 510 | WP_000759176.1 | hypothetical protein | VF |
| JKF55_RS26560 () | 100198..101019 | - | 822 | WP_042634481.1 | DUF945 domain-containing protein | - |
| JKF55_RS26565 () | 101125..101421 | - | 297 | WP_021558926.1 | hypothetical protein | - |
| JKF55_RS26570 () | 101445..101651 | - | 207 | WP_042634482.1 | hypothetical protein | - |
| JKF55_RS26575 () | 101721..102080 | + | 360 | Protein_117 | hypothetical protein | - |
| JKF55_RS26580 () | 102318..102476 | - | 159 | WP_042634416.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 102528..102676 | - | 149 | NuclAT_1 | - | - |
| - () | 102528..102676 | - | 149 | NuclAT_1 | - | - |
| - () | 102528..102676 | - | 149 | NuclAT_1 | - | - |
| - () | 102528..102676 | - | 149 | NuclAT_1 | - | - |
| JKF55_RS26585 () | 102652..102927 | - | 276 | WP_077631319.1 | hypothetical protein | - |
| JKF55_RS26590 () | 103007..104578 | - | 1572 | WP_000381443.1 | IS66 family transposase IS679 | Transposase |
| JKF55_RS26595 () | 104598..104945 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| JKF55_RS26600 () | 104945..105595 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| JKF55_RS26605 () | 105971..106129 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 106194..106392 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 106194..106392 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 106194..106392 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 106194..106392 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| JKF55_RS26610 () | 106404..107123 | - | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| JKF55_RS26615 () | 107120..107554 | - | 435 | WP_116794657.1 | conjugation system SOS inhibitor PsiB | - |
| JKF55_RS26620 () | 107609..109567 | - | 1959 | WP_000117204.1 | ParB/RepB/Spo0J family partition protein | - |
| JKF55_RS26625 () | 109631..109864 | - | 234 | WP_000005985.1 | DUF905 family protein | - |
| JKF55_RS26630 () | 109926..110465 | - | 540 | WP_000290811.1 | single-stranded DNA-binding protein | - |
| JKF55_RS26635 () | 110491..110697 | - | 207 | WP_000275848.1 | hypothetical protein | - |
| JKF55_RS26640 () | 110767..111193 | + | 427 | Protein_130 | hypothetical protein | - |
| JKF55_RS26645 () | 111279..111842 | - | 564 | WP_063501375.1 | class I SAM-dependent methyltransferase | - |
| JKF55_RS26650 () | 111889..113250 | - | 1362 | WP_000170653.1 | DUF3560 domain-containing protein | - |
| JKF55_RS26655 () | 113302..113532 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| JKF55_RS26660 () | 114519..114710 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| JKF55_RS26665 () | 114710..115129 | - | 420 | WP_000271717.1 | DUF1380 family protein | - |
| JKF55_RS26670 () | 115176..115478 | - | 303 | WP_001436678.1 | antirestriction protein | - |
| JKF55_RS26675 () | 116015..116794 | - | 780 | WP_201448039.1 | hypothetical protein | - |
| JKF55_RS26680 () | 116845..117279 | - | 435 | WP_000274480.1 | DUF1380 family protein | - |
| JKF55_RS26685 () | 117293..117514 | - | 222 | WP_001104880.1 | hypothetical protein | - |
| JKF55_RS26690 () | 117515..118198 | - | 684 | WP_168994255.1 | DNA methylase | - |
| JKF55_RS26695 () | 118274..118584 | - | 311 | Protein_141 | hypothetical protein | - |
| JKF55_RS26700 () | 118581..119483 | - | 903 | WP_001393259.1 | DUF1281 domain-containing protein | - |
| JKF55_RS26705 () | 119922..120881 | + | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| JKF55_RS26710 () | 120881..121276 | + | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| JKF55_RS26715 () | 121418..122329 | - | 912 | WP_024244186.1 | hypothetical protein | VF |
| JKF55_RS26720 () | 122418..123605 | - | 1188 | WP_000905831.1 | hypothetical protein | - |
| JKF55_RS26725 () | 123869..124150 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JKF55_RS26730 () | 124147..124416 | - | 270 | WP_000079941.1 | hypothetical protein | - |
| JKF55_RS26735 () | 124683..125855 | + | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| JKF55_RS26740 () | 125855..126247 | + | 393 | Protein_150 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|