MGE detailed information
MGE type: Conjugative plasmid MGE length: 118340 bp
Accession: NZ_CP067431 Location: 1..118340 Organism: Escherichia coli O22:H8 strain 154 Replicon: plasmid p118
Accession: NZ_CP067431 Location: 1..118340 Organism: Escherichia coli O22:H8 strain 154 Replicon: plasmid p118
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI426_RS27850 (398) | 398..2368 | - | 1971 | WP_052079468.1 | Hemin receptor | VF |
| JI426_RS27860 (5166) | 5166..5438 | + | 273 | WP_071827457.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JI426_RS27865 (5770) | 5770..6428 | + | 659 | Protein_4 | transposase | - |
| JI426_RS27870 (6448) | 6448..6731 | + | 284 | Protein_5 | IS3 family transposase | - |
| JI426_RS27875 (7010) | 7010..8179 | - | 1170 | WP_028985819.1 | hypothetical protein | - |
| JI426_RS27880 (8838) | 8838..9578 | + | 741 | WP_001066934.1 | tyrosine-type recombinase/integrase | - |
| JI426_RS27885 (9863) | 9863..10840 | - | 978 | WP_000361613.1 | RepB family plasmid replication initiator protein | - |
| JI426_RS27890 (11680) | 11680..12321 | - | 642 | WP_028985818.1 | hypothetical protein | - |
| JI426_RS27895 (14436) | 14436..14726 | + | 291 | WP_000538310.1 | hypothetical protein | - |
| JI426_RS27900 (14716) | 14716..15615 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| JI426_RS27905 (15665) | 15665..17890 | - | 2226 | WP_028985935.1 | P-loop NTPase fold protein | - |
| JI426_RS27910 (17892) | 17892..18980 | - | 1089 | WP_028985936.1 | transcriptional repressor PifC | - |
| JI426_RS27915 (19560) | 19560..19778 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JI426_RS27920 (19780) | 19780..20085 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JI426_RS27925 (20086) | 20086..20892 | + | 807 | Protein_16 | site-specific integrase | - |
| JI426_RS27930 (21666) | 21666..21977 | + | 312 | Protein_17 | RepB family plasmid replication initiator protein | - |
| JI426_RS27940 (23236) | 23236..23682 | + | 447 | Protein_19 | RepB family plasmid replication initiator protein | - |
| JI426_RS27945 (24270) | 24270..25436 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| JI426_RS27950 (25436) | 25436..26407 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JI426_RS27955 (27059) | 27059..27960 | + | 902 | Protein_22 | DUF1281 domain-containing protein | - |
| JI426_RS27960 (27964) | 27964..28269 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| JI426_RS27965 (28346) | 28346..29029 | + | 684 | WP_000085939.1 | DNA methylase | - |
| JI426_RS27970 (29030) | 29030..29251 | + | 222 | WP_001104870.1 | hypothetical protein | - |
| JI426_RS27975 (29145) | 29145..29699 | + | 555 | WP_077248347.1 | DUF1380 family protein | - |
| JI426_RS27980 (29745) | 29745..30515 | + | 771 | WP_249869023.1 | hypothetical protein | - |
| JI426_RS27985 (30928) | 30928..31353 | + | 426 | WP_001198914.1 | antirestriction protein | - |
| JI426_RS27990 (31400) | 31400..31819 | + | 420 | WP_033817138.1 | DUF1380 family protein | - |
| JI426_RS27995 (31819) | 31819..32010 | + | 192 | WP_001027048.1 | hypothetical protein | - |
| JI426_RS28000 (32978) | 32978..33208 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| JI426_RS28005 (33260) | 33260..34621 | + | 1362 | WP_135247432.1 | DUF3560 domain-containing protein | - |
| JI426_RS28010 (34668) | 34668..35231 | + | 564 | WP_135247433.1 | class I SAM-dependent methyltransferase | - |
| JI426_RS28015 (35320) | 35320..35778 | - | 459 | Protein_34 | hypothetical protein | - |
| JI426_RS28020 (36080) | 36080..36607 | + | 528 | WP_000290845.1 | single-stranded DNA-binding protein | - |
| JI426_RS28025 (36622) | 36622..36888 | + | 267 | WP_135247454.1 | DUF905 family protein | - |
| JI426_RS28030 (36949) | 36949..38913 | + | 1965 | WP_135247436.1 | ParB/RepB/Spo0J family partition protein | - |
| JI426_RS28035 (38982) | 38982..39416 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| JI426_RS28040 (39413) | 39413..40132 | + | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| JI426_RS28045 (40129) | 40129..40443 | + | 315 | WP_001562885.1 | hypothetical protein | - |
| - (40392) | 40392..40605 | + | 214 | NuclAT_0 | - | Antitoxin Detail |
| - (40392) | 40392..40605 | + | 214 | NuclAT_0 | - | Antitoxin Detail |
| - (40392) | 40392..40605 | + | 214 | NuclAT_0 | - | Antitoxin Detail |
| - (40392) | 40392..40605 | + | 214 | NuclAT_0 | - | Antitoxin Detail |
| JI426_RS28050 (40593) | 40593..40745 | + | 153 | Protein_41 | DUF5431 family protein | - |
| JI426_RS28055 (40690) | 40690..40812 | + | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| JI426_RS28060 (41113) | 41113..41410 | - | 298 | Protein_43 | hypothetical protein | - |
| JI426_RS28065 (41710) | 41710..42012 | + | 303 | WP_001272236.1 | hypothetical protein | - |
| JI426_RS28070 (42168) | 42168..42455 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| JI426_RS28075 (42573) | 42573..43394 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| JI426_RS28080 (43690) | 43690..44337 | - | 648 | WP_135247439.1 | hypothetical protein | VF |
| JI426_RS28085 (44613) | 44613..44996 | + | 384 | WP_001151535.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JI426_RS28090 (45190) | 45190..45837 | + | 648 | WP_000332526.1 | transcriptional regulator TraJ family protein | - |
| JI426_RS28095 (45956) | 45956..46183 | + | 228 | WP_024180943.1 | conjugal transfer relaxosome protein TraY | - |
| JI426_RS28100 (46218) | 46218..46571 | + | 354 | WP_028985883.1 | type IV conjugative transfer system pilin TraA | - |
| JI426_RS28105 (46586) | 46586..46897 | + | 312 | WP_000012099.1 | type IV conjugative transfer system protein TraL | - |
| JI426_RS28110 (46919) | 46919..47485 | + | 567 | WP_000399759.1 | type IV conjugative transfer system protein TraE | - |
| JI426_RS28115 (47472) | 47472..48200 | + | 729 | WP_021573902.1 | type-F conjugative transfer system secretin TraK | - |
| JI426_RS28120 (48200) | 48200..49630 | + | 1431 | WP_135247440.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JI426_RS28125 (49620) | 49620..50207 | + | 588 | WP_000002895.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JI426_RS28130 (50194) | 50194..50514 | + | 321 | WP_028985886.1 | conjugal transfer protein TrbD | - |
| JI426_RS28135 (50511) | 50511..51026 | + | 516 | WP_028985887.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JI426_RS28140 (51161) | 51161..51382 | + | 222 | WP_001278980.1 | conjugal transfer protein TraR | - |
| JI426_RS28145 (51542) | 51542..54169 | + | 2628 | WP_135247441.1 | type IV secretion system protein TraC | - |
| JI426_RS28150 (54166) | 54166..54552 | + | 387 | WP_135247442.1 | type-F conjugative transfer system protein TrbI | - |
| JI426_RS28155 (54549) | 54549..55181 | + | 633 | WP_000877293.1 | type-F conjugative transfer system protein TraW | - |
| JI426_RS28160 (55178) | 55178..56170 | + | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| JI426_RS28165 (56184) | 56184..56726 | + | 543 | WP_001365589.1 | hypothetical protein | - |
| JI426_RS28170 (57455) | 57455..57901 | + | 447 | WP_001289131.1 | hypothetical protein | - |
| JI426_RS28175 (57950) | 57950..58074 | + | 125 | Protein_66 | TraU family protein | - |
| JI426_RS28180 (58095) | 58095..58274 | + | 180 | WP_000970212.1 | hypothetical protein | - |
| JI426_RS28185 (58271) | 58271..58510 | - | 240 | WP_050439339.1 | hypothetical protein | - |
| JI426_RS28190 (58703) | 58703..59341 | + | 639 | WP_001035176.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JI426_RS28195 (59338) | 59338..59718 | + | 381 | WP_032206670.1 | hypothetical protein | - |
| JI426_RS28200 (59812) | 59812..61716 | + | 1905 | WP_249869018.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JI426_RS28205 (61730) | 61730..61987 | + | 258 | WP_000864346.1 | conjugal transfer protein TrbE | - |
| JI426_RS28210 (61980) | 61980..62723 | + | 744 | WP_001030373.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JI426_RS28215 (62737) | 62737..63078 | + | 342 | WP_000556797.1 | conjugal transfer protein TrbA | - |
| JI426_RS28220 (63475) | 63475..63765 | + | 291 | WP_021521297.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JI426_RS28225 (63752) | 63752..64297 | + | 546 | WP_001457363.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JI426_RS28230 (64227) | 64227..64574 | + | 348 | WP_071532380.1 | P-type conjugative transfer protein TrbJ | - |
| JI426_RS28235 (64555) | 64555..64947 | + | 393 | WP_032327004.1 | F-type conjugal transfer protein TrbF | - |
| JI426_RS28240 (64934) | 64934..66307 | + | 1374 | WP_000944332.1 | conjugal transfer pilus assembly protein TraH | - |
| JI426_RS28245 (66304) | 66304..69147 | + | 2844 | WP_135247447.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JI426_RS28250 (69163) | 69163..69660 | + | 498 | WP_032211977.1 | entry exclusion protein | - |
| JI426_RS28255 (69692) | 69692..70423 | + | 732 | WP_028985894.1 | conjugal transfer complement resistance protein TraT | - |
| JI426_RS28260 (70495) | 70495..71106 | + | 612 | WP_000908442.1 | hypothetical protein | - |
| JI426_RS28265 (71388) | 71388..73559 | + | 2172 | WP_249869019.1 | type IV conjugative transfer system coupling protein TraD | - |
| JI426_RS28270 (73568) | 73568..73966 | - | 399 | WP_000911320.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JI426_RS28275 (73966) | 73966..74193 | - | 228 | WP_000450527.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JI426_RS28280 (74275) | 74275..79545 | + | 5271 | WP_249869020.1 | Multifunctional conjugation protein TraI | Relaxase |
| JI426_RS28285 (79565) | 79565..80311 | + | 747 | WP_000205707.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| JI426_RS28290 (80394) | 80394..80762 | + | 369 | WP_000722532.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| JI426_RS28295 (80798) | 80798..81355 | + | 558 | WP_044863028.1 | fertility inhibition protein FinO | - |
| JI426_RS28300 (81509) | 81509..81712 | + | 204 | WP_001365608.1 | hypothetical protein | - |
| JI426_RS28305 (82454) | 82454..82915 | + | 462 | WP_135247450.1 | thermonuclease family protein | - |
| JI426_RS28310 (83018) | 83018..83401 | + | 384 | WP_106904244.1 | hypothetical protein | - |
| JI426_RS28315 (83556) | 83556..84020 | + | 465 | WP_106904243.1 | hypothetical protein | - |
| - (84171) | 84171..84227 | - | 57 | NuclAT_1 | - | - |
| - (84171) | 84171..84227 | - | 57 | NuclAT_1 | - | - |
| - (84171) | 84171..84227 | - | 57 | NuclAT_1 | - | - |
| - (84171) | 84171..84227 | - | 57 | NuclAT_1 | - | - |
| JI426_RS28320 (84276) | 84276..84425 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| JI426_RS28325 (84709) | 84709..84969 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| JI426_RS28330 (85194) | 85194..85268 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JI426_RS28335 (85261) | 85261..86118 | + | 858 | WP_000131008.1 | incFII family plasmid replication initiator RepA | - |
| JI426_RS28340 (87092) | 87092..87331 | + | 240 | WP_000859018.1 | winged helix-turn-helix transcriptional regulator | - |
| JI426_RS28345 (87670) | 87670..88005 | - | 336 | Protein_100 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| JI426_RS28350 (88008) | 88008..88757 | + | 750 | Protein_101 | ISKra4 family transposase ISEc51 | Transposase |
| JI426_RS28355 (88823) | 88823..88942 | + | 120 | Protein_102 | type II toxin-antitoxin system antitoxin YacA | - |
| JI426_RS28360 (89431) | 89431..89778 | + | 348 | WP_028985873.1 | DUF6404 family protein | - |
| JI426_RS28365 (89871) | 89871..90904 | + | 1034 | Protein_104 | IS256 family transposase IS1414 | Transposase |
| JI426_RS28370 (90959) | 90959..91183 | + | 225 | Protein_105 | IS3 family transposase IS1203 | Transposase |
| JI426_RS28375 (91458) | 91458..93014 | + | 1557 | WP_000554413.1 | L-lactate permease | - |
| JI426_RS28380 (93064) | 93064..93783 | + | 720 | WP_001102132.1 | (Fe-S)-binding protein | - |
| JI426_RS28385 (93794) | 93794..95209 | + | 1416 | WP_000054157.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| JI426_RS28390 (95214) | 95214..95912 | + | 699 | WP_000431491.1 | lactate utilization protein C | - |
| JI426_RS28395 (96062) | 96062..96387 | - | 326 | Protein_110 | IS3 family transposase ISEal1 | Transposase |
| JI426_RS28400 (96932) | 96932..97234 | + | 303 | WP_071827458.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JI426_RS28405 (97376) | 97376..98560 | + | 1185 | WP_235802458.1 | TolC family protein | - |
| JI426_RS28410 (98557) | 98557..100704 | + | 2148 | WP_001620877.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| JI426_RS28415 (100764) | 100764..102011 | + | 1248 | WP_001620879.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| JI426_RS28420 (102229) | 102229..111951 | + | 9723 | WP_249869021.1 | hypothetical protein | - |
| JI426_RS28425 (111975) | 111975..115001 | + | 3027 | WP_249869022.1 | hypothetical protein | - |
| JI426_RS28430 (115080) | 115080..116948 | + | 1869 | WP_033817154.1 | Lipase | VF |
| JI426_RS28435 (117509) | 117509..117769 | + | 261 | WP_235802462.1 | LuxR C-terminal-related transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|