MGE detailed information
MGE type: Genomic_island MGE length: 11235 bp
Accession: NZ_CP067365 Location: 528194..539428 Organism: Lacticaseibacillus rhamnosus strain KF7 Replicon: chromosome
Accession: NZ_CP067365 Location: 528194..539428 Organism: Lacticaseibacillus rhamnosus strain KF7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JIO02_RS02475 () | 523778..524146 | - | 369 | WP_005686376.1 | PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM | - |
| JIO02_RS02480 () | 524295..524876 | - | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit L | - |
| JIO02_RS02485 () | 524863..525882 | - | 1020 | WP_005691624.1 | dihydroxyacetone kinase subunit DhaK | - |
| JIO02_RS02490 () | 526075..526503 | - | 429 | WP_005691626.1 | OsmC family protein | - |
| JIO02_RS02495 () | 527033..527722 | + | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| JIO02_RS02500 () | 528194..529210 | - | 1017 | WP_019728331.1 | IS30 family transposase ISSag3 | Transposase |
| JIO02_RS02505 () | 529406..530014 | - | 609 | WP_005691630.1 | hypothetical protein | - |
| JIO02_RS02510 () | 530461..531336 | + | 876 | WP_024305787.1 | XRE family transcriptional regulator | - |
| JIO02_RS02515 () | 531579..532994 | - | 1416 | WP_005691634.1 | DNA polymerase III subunit epsilon | - |
| JIO02_RS02520 () | 533218..533403 | - | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| JIO02_RS02525 () | 533431..533703 | - | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| JIO02_RS02530 () | 534265..534513 | + | 249 | WP_005691639.1 | hypothetical protein | - |
| JIO02_RS02535 () | 534756..535049 | + | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JIO02_RS02540 () | 535131..536294 | + | 1164 | WP_005691640.1 | MFS transporter | - |
| JIO02_RS02545 () | 536448..537023 | + | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| JIO02_RS02550 () | 537166..537762 | + | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| JIO02_RS02555 () | 537797..538978 | + | 1182 | WP_014571132.1 | transposase | - |
| JIO02_RS02560 () | 539210..539428 | + | 219 | WP_005691646.1 | hypothetical protein | - |
| JIO02_RS02565 () | 539557..540438 | - | 882 | WP_005684263.1 | class II fructose-1,6-bisphosphate aldolase | - |
| JIO02_RS02570 () | 541027..542760 | + | 1734 | WP_193820366.1 | pyruvate oxidase | - |
| JIO02_RS02575 () | 542972..543259 | - | 288 | WP_005691648.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0.003 | |
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0.003 |