MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122982 bp
Accession: NZ_CP067236 Location: 1..122982 Organism: Escherichia coli strain SBF22 Replicon: plasmid pSBF22a
Accession: NZ_CP067236 Location: 1..122982 Organism: Escherichia coli strain SBF22 Replicon: plasmid pSBF22a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB19_RS23880 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| JJB19_RS23885 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| JJB19_RS23890 (2124) | 2124..2312 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| JJB19_RS23895 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| JJB19_RS23900 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| JJB19_RS23905 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| JJB19_RS23910 (7449) | 7449..7628 | - | 180 | Protein_6 | integrase core domain-containing protein | - |
| JJB19_RS23915 (7767) | 7767..8966 | + | 1200 | Protein_7 | IS3 family transposase IS629 | Transposase |
| JJB19_RS23920 (9114) | 9114..9439 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| JJB19_RS25685 (9485) | 9485..9825 | + | 341 | Protein_9 | IS3 family transposase | - |
| JJB19_RS23925 (10420) | 10420..11607 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| JJB19_RS23930 (11604) | 11604..13544 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| JJB19_RS23935 (13548) | 13548..14918 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| JJB19_RS23940 (15392) | 15392..15583 | + | 192 | Protein_13 | IS200/IS605-like element IS200C family transposase | - |
| JJB19_RS23945 (15670) | 15670..16374 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JJB19_RS23950 (16438) | 16438..17052 | - | 615 | Protein_15 | tyrosine-type recombinase/integrase | - |
| JJB19_RS23955 (17053) | 17053..17358 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JJB19_RS23960 (17360) | 17360..17578 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JJB19_RS23965 (18045) | 18045..18740 | + | 696 | WP_072652234.1 | DNA-binding protein | - |
| JJB19_RS23970 (18737) | 18737..19357 | + | 621 | WP_072652229.1 | hypothetical protein | - |
| JJB19_RS25690 (19354) | 19354..19545 | + | 192 | Protein_20 | hypothetical protein | - |
| JJB19_RS23975 (19561) | 19561..20142 | + | 582 | WP_228719449.1 | DUF2971 domain-containing protein | - |
| JJB19_RS23980 (20178) | 20178..20918 | + | 741 | WP_000933099.1 | abortive infection family protein | - |
| JJB19_RS23985 (21077) | 21077..21706 | - | 630 | Protein_23 | hypothetical protein | - |
| JJB19_RS23990 (22481) | 22481..23457 | + | 977 | Protein_24 | RepB family plasmid replication initiator protein | - |
| JJB19_RS23995 (23742) | 23742..24472 | - | 731 | Protein_25 | tyrosine-type recombinase/integrase | - |
| JJB19_RS24000 (25297) | 25297..25506 | + | 210 | WP_000929752.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JJB19_RS24005 (25714) | 25714..26469 | + | 756 | WP_077251685.1 | Chaperone protein caf1M | VF |
| JJB19_RS24010 (26597) | 26597..29155 | + | 2559 | WP_285835022.1 | F1 capsule-anchoring protein | VF |
| JJB19_RS24015 (29172) | 29172..29594 | + | 423 | WP_072859586.1 | Protein AggB | VF |
| JJB19_RS24020 (30087) | 30087..30569 | + | 483 | WP_086660566.1 | hypothetical protein | - |
| JJB19_RS24025 (30745) | 30745..30924 | - | 180 | WP_249534553.1 | plasmid pRiA4b ORF-3 family protein | - |
| JJB19_RS24030 (31520) | 31520..31708 | - | 189 | WP_143208135.1 | hypothetical protein | - |
| JJB19_RS24035 (31709) | 31709..32113 | - | 405 | WP_208776477.1 | DUF2251 domain-containing protein | - |
| JJB19_RS24040 (32283) | 32283..32570 | - | 288 | WP_086660615.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JJB19_RS24045 (32722) | 32722..34473 | - | 1752 | Protein_35 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JJB19_RS24050 (34477) | 34477..34869 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| JJB19_RS24055 (35007) | 35007..35891 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| JJB19_RS24060 (35923) | 35923..37050 | - | 1128 | WP_002018110.1 | Tetracycline resistance protein, class C | ARG |
| JJB19_RS24065 (37148) | 37148..37852 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JJB19_RS24070 (38117) | 38117..38977 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JJB19_RS24075 (39126) | 39126..39803 | + | 678 | Protein_41 | IS4 family transposase IS10R | Transposase |
| JJB19_RS24080 (39813) | 39813..40229 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| JJB19_RS24085 (40317) | 40317..40910 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| JJB19_RS24090 (41023) | 41023..42228 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| JJB19_RS24095 (42310) | 42310..42933 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| JJB19_RS24100 (42911) | 42911..43597 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| JJB19_RS24105 (43605) | 43605..43991 | - | 387 | WP_000460653.1 | hypothetical protein | - |
| JJB19_RS24110 (43984) | 43984..44304 | - | 321 | WP_000562367.1 | antibiotic biosynthesis monooxygenase | - |
| JJB19_RS24115 (44748) | 44748..45953 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| JJB19_RS24120 (46184) | 46184..46303 | + | 120 | Protein_50 | LysR family transcriptional regulator | - |
| JJB19_RS24125 (46319) | 46319..47527 | - | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| JJB19_RS24130 (47688) | 47688..48347 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| JJB19_RS24135 (48548) | 48548..48925 | - | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| JJB19_RS24140 (49100) | 49100..49804 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JJB19_RS24145 (49858) | 49858..49944 | - | 87 | Protein_55 | recombinase family protein | - |
| JJB19_RS24150 (50209) | 50209..50745 | + | 537 | Protein_56 | PAS domain-containing protein | - |
| JJB19_RS24155 (50813) | 50813..51910 | - | 1098 | Protein_57 | TonB-dependent receptor | - |
| JJB19_RS24160 (51967) | 51967..52935 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| JJB19_RS24165 (52970) | 52970..53845 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| JJB19_RS24170 (54095) | 54095..54286 | - | 192 | Protein_60 | IS1380 family transposase | - |
| JJB19_RS24175 (54350) | 54350..54976 | - | 627 | WP_000434930.1 | hypothetical protein | - |
| JJB19_RS24180 (54976) | 54976..56658 | - | 1683 | WP_251362737.1 | AAA family ATPase | - |
| JJB19_RS24185 (56683) | 56683..57387 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JJB19_RS24190 (57442) | 57442..57867 | + | 426 | Protein_64 | TetR/AcrR family transcriptional regulator | - |
| JJB19_RS24195 (57887) | 57887..58675 | + | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| JJB19_RS24200 (58675) | 58675..59193 | + | 519 | WP_014839979.1 | FidL-like protein | - |
| JJB19_RS24205 (59198) | 59198..59614 | - | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| JJB19_RS24210 (60000) | 60000..60704 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JJB19_RS24215 (60754) | 60754..61473 | + | 720 | Protein_69 | helicase RepA family protein | - |
| JJB19_RS24220 (61460) | 61460..62431 | + | 972 | WP_208776478.1 | replication protein C, IncQ-type | - |
| JJB19_RS24225 (62619) | 62619..63434 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| JJB19_RS24230 (63495) | 63495..64298 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JJB19_RS24235 (64298) | 64298..65134 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| JJB19_RS24240 (65195) | 65195..65899 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JJB19_RS24245 (66050) | 66050..66865 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JJB19_RS24250 (67055) | 67055..67183 | - | 129 | Protein_76 | IS6 family transposase | - |
| JJB19_RS24260 (68146) | 68146..68547 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JJB19_RS24265 (68480) | 68480..68737 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JJB19_RS25695 (68830) | 68830..69138 | - | 309 | WP_226116723.1 | CPBP family intramembrane metalloprotease | - |
| JJB19_RS25700 (69080) | 69080..69472 | - | 393 | WP_000616804.1 | histidine phosphatase family protein | - |
| JJB19_RS24275 (70411) | 70411..71268 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| JJB19_RS24280 (71261) | 71261..71743 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| JJB19_RS25705 (71736) | 71736..71783 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| JJB19_RS25710 (71774) | 71774..72025 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| JJB19_RS24290 (72042) | 72042..72299 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| JJB19_RS24295 (72583) | 72583..72732 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (72776) | 72776..72837 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (72776) | 72776..72837 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (72776) | 72776..72837 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (72776) | 72776..72837 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| JJB19_RS24300 (73093) | 73093..73167 | - | 75 | Protein_88 | endonuclease | - |
| JJB19_RS24305 (73413) | 73413..73625 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| JJB19_RS24310 (73761) | 73761..74321 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| JJB19_RS24315 (74424) | 74424..75284 | - | 861 | WP_000704514.1 | putative protein YcjY | VF |
| JJB19_RS24320 (75343) | 75343..76089 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| JJB19_RS24325 (76109) | 76109..81379 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| JJB19_RS24330 (81461) | 81461..81688 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JJB19_RS24335 (81688) | 81688..82086 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JJB19_RS24340 (82095) | 82095..84248 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| JJB19_RS24345 (84501) | 84501..85232 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| JJB19_RS24350 (85264) | 85264..85761 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| JJB19_RS24355 (85777) | 85777..88599 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JJB19_RS24360 (88596) | 88596..89969 | - | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| JJB19_RS24365 (89969) | 89969..90349 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| JJB19_RS24370 (90336) | 90336..90677 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| JJB19_RS24375 (90607) | 90607..91152 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JJB19_RS24380 (91139) | 91139..91423 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JJB19_RS24385 (91504) | 91504..91818 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| JJB19_RS24390 (91820) | 91820..92167 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| JJB19_RS24395 (92183) | 92183..92926 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JJB19_RS24400 (92919) | 92919..93176 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| JJB19_RS24405 (93203) | 93203..95011 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JJB19_RS24410 (95008) | 95008..95646 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JJB19_RS24415 (95655) | 95655..95993 | - | 339 | Protein_111 | TraU family protein | - |
| JJB19_RS24420 (96059) | 96059..96763 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JJB19_RS25715 (96931) | 96931..97103 | + | 173 | Protein_113 | hypothetical protein | - |
| JJB19_RS25720 (97101) | 97101..97331 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| JJB19_RS24425 (97551) | 97551..97676 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JJB19_RS25725 (97618) | 97618..97767 | - | 150 | Protein_116 | plasmid maintenance protein Mok | - |
| - (97753) | 97753..97977 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (97753) | 97753..97977 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (97753) | 97753..97977 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (97753) | 97753..97977 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| JJB19_RS24430 (97789) | 97789..97977 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| JJB19_RS24435 (97946) | 97946..98708 | - | 763 | Protein_118 | plasmid SOS inhibition protein A | - |
| JJB19_RS24440 (98705) | 98705..99139 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| JJB19_RS24445 (99194) | 99194..99391 | - | 198 | Protein_120 | hypothetical protein | - |
| JJB19_RS24450 (99419) | 99419..99652 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| JJB19_RS24455 (99720) | 99720..100259 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| JJB19_RS24460 (100285) | 100285..100491 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| JJB19_RS25730 (100561) | 100561..100641 | + | 81 | Protein_124 | hypothetical protein | - |
| JJB19_RS25735 (100824) | 100824..100993 | - | 170 | Protein_125 | hypothetical protein | - |
| JJB19_RS24465 (101630) | 101630..102601 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JJB19_RS24470 (102601) | 102601..103767 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| JJB19_RS24480 (105249) | 105249..107450 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| JJB19_RS24485 (107476) | 107476..108809 | - | 1334 | Protein_130 | L-lysine N6-monooxygenase | VF |
| JJB19_RS24490 (108806) | 108806..110548 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| JJB19_RS24495 (110548) | 110548..111495 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| JJB19_RS24500 (111496) | 111496..113220 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| JJB19_RS24505 (113356) | 113356..114549 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| JJB19_RS24510 (114929) | 114929..115309 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| JJB19_RS24515 (115650) | 115650..116063 | - | 414 | Protein_136 | phosphopyruvate hydratase | - |
| JJB19_RS24520 (116061) | 116061..116318 | + | 258 | Protein_137 | Tn3 family transposase | - |
| JJB19_RS24525 (116552) | 116552..117409 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| JJB19_RS24530 (117406) | 117406..118263 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| JJB19_RS24535 (118260) | 118260..119087 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| JJB19_RS24540 (119087) | 119087..120001 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| JJB19_RS24545 (120357) | 120357..121054 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| JJB19_RS24550 (121234) | 121234..121747 | - | 514 | Protein_143 | DUF4113 domain-containing protein | - |
| JJB19_RS24555 (121808) | 121808..121912 | - | 105 | Protein_144 | AAA family ATPase | - |
| JJB19_RS24560 (121914) | 121914..122237 | - | 324 | Protein_145 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|