MGE detailed information

MGE type: Conjugative plasmid        MGE length: 149407 bp
Accession: NZ_CP066256        Location: 1..149407         Organism: Klebsiella pneumoniae strain CRKP78R       Replicon: plasmid p3


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JCR35_RS27760 () 1..858 + 858 WP_032495102.1 incFII family plasmid replication initiator RepA -
JCR35_RS27765 () 1797..2450 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
JCR35_RS27770 () 2543..2800 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
JCR35_RS27775 () 2733..3134 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
JCR35_RS27780 () 3383..3798 + 416 Protein_5 IS1 family transposase -
JCR35_RS27785 () 3834..4379 - 546 Protein_6 Tn3 family transposase TnpA_Tn3 Transposase
JCR35_RS27790 () 4445..5149 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS27795 () 5219..5410 + 192 Protein_8 transposase -
JCR35_RS27800 () 5660..6535 + 876 WP_013188475.1 Beta-lactamase Toho-1 ARG
JCR35_RS27805 () 6570..7538 + 969 WP_013362812.1 IS5 family transposase IS903B Transposase
JCR35_RS27810 () 7595..8692 + 1098 Protein_11 TonB-dependent receptor -
JCR35_RS27815 () 8760..9209 - 450 Protein_12 PAS domain-containing protein -
JCR35_RS27820 () 9289..9993 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS27825 () 10058..10648 + 591 Protein_14 IS91 family transposase ISSbo1 Transposase
JCR35_RS27830 () 11104..11808 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS27835 () 11862..12185 - 324 Protein_16 class II aldolase/adducin family protein -
JCR35_RS27840 () 12178..13430 - 1253 Protein_17 four-carbon acid sugar kinase family protein -
JCR35_RS27845 () 13442..14344 - 903 WP_002903955.1 NAD(P)-dependent oxidoreductase -
JCR35_RS27850 () 14606..15367 + 762 WP_002210513.1 DeoR/GlpR family DNA-binding transcription regulator -
JCR35_RS27855 () 15388..16248 - 861 WP_002904004.1 Beta-lactamase SHV-2 ARG
JCR35_RS27860 () 16385..16453 + 69 Protein_21 IS6 family transposase -
JCR35_RS27865 () 16587..17291 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS27870 () 17325..22460 - 5136 WP_071177725.1 Multifunctional conjugation protein TraI Relaxase
JCR35_RS27875 () 22460..24676 - 2217 WP_059274178.1 type IV conjugative transfer system coupling protein TraD -
JCR35_RS27880 () 24727..25464 - 738 WP_015059020.1 hypothetical protein -
JCR35_RS27885 () 25667..26398 - 732 WP_021559024.1 complement resistance protein TraT -
JCR35_RS27890 () 26423..26944 - 522 WP_000632668.1 conjugal transfer entry exclusion protein TraS -
JCR35_RS27895 () 26977..29793 - 2817 WP_015059018.1 conjugal transfer mating pair stabilization protein TraG -
JCR35_RS27900 () 29790..31163 - 1374 WP_000944325.1 conjugal transfer protein TraH -
JCR35_RS27905 () 31150..31542 - 393 WP_000126338.1 F-type conjugal transfer protein TrbF -
JCR35_RS27910 () 31496..31870 - 375 WP_071776752.1 P-type conjugative transfer protein TrbJ -
JCR35_RS27915 () 31800..32345 - 546 WP_000059817.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
JCR35_RS27920 () 32332..32613 - 282 WP_000549793.1 type-F conjugative transfer system pilin chaperone TraQ -
JCR35_RS27925 () 32729..33478 - 750 WP_072354014.1 type-F conjugative transfer system pilin assembly protein TraF -
JCR35_RS27930 () 33465..33722 - 258 WP_053913405.1 conjugal transfer protein TrbE -
JCR35_RS27935 () 33749..35599 - 1851 WP_015059015.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
JCR35_RS27940 () 35596..36018 - 423 WP_001229309.1 HNH endonuclease -
JCR35_RS27945 () 36044..36415 - 372 WP_000056336.1 hypothetical protein -
JCR35_RS27950 () 36412..37050 - 639 WP_000087532.1 type-F conjugative transfer system pilin assembly protein TrbC -
JCR35_RS27955 () 37077..37598 - 522 WP_015059014.1 hypothetical protein -
JCR35_RS27960 () 37661..37969 - 309 WP_000412447.1 hypothetical protein -
JCR35_RS27965 () 37996..38988 - 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
JCR35_RS27970 () 38985..39617 - 633 WP_001203735.1 type-F conjugative transfer system protein TraW -
JCR35_RS27975 () 39614..40000 - 387 WP_015059013.1 type-F conjugative transfer system protein TrbI -
JCR35_RS27980 () 39997..42624 - 2628 WP_015059012.1 type IV secretion system protein TraC -
JCR35_RS27985 () 42784..43005 - 222 WP_001278692.1 conjugal transfer protein TraR -
JCR35_RS27990 () 43140..43655 - 516 WP_062955122.1 type IV conjugative transfer system lipoprotein TraV -
JCR35_RS27995 () 43652..43903 - 252 WP_001038341.1 conjugal transfer protein TrbG -
JCR35_RS28000 () 43915..44145 - 231 WP_001352845.1 conjugal transfer protein TrbD -
JCR35_RS28005 () 44099..44689 - 591 WP_000002778.1 conjugal transfer protein TraP -
JCR35_RS28010 () 44679..46106 - 1428 WP_032297072.1 conjugal transfer protein TraB -
JCR35_RS28015 () 46106..46810 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
JCR35_RS28020 () 46821..47387 - 567 WP_000399794.1 type IV conjugative transfer system protein TraE -
JCR35_RS28025 () 47409..47720 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
JCR35_RS28030 () 47735..48100 - 366 WP_021519752.1 type IV conjugative transfer system pilin TraA -
JCR35_RS28035 () 48134..48361 - 228 WP_001254386.1 conjugal transfer relaxosome protein TraY -
JCR35_RS28040 () 48455..49141 - 687 WP_015059009.1 PAS domain-containing protein -
JCR35_RS28045 () 49332..49715 - 384 WP_000124981.1 relaxosome protein TraM -
JCR35_RS28050 () 49992..50639 + 648 WP_015059008.1 hypothetical protein VF
JCR35_RS28055 () 50936..51757 - 822 WP_001234445.1 DUF945 domain-containing protein -
JCR35_RS28060 () 51868..52164 - 297 WP_001272251.1 hypothetical protein -
JCR35_RS28065 () 52464..52841 + 378 Protein_62 hypothetical protein -
JCR35_RS28070 () 53079..53237 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 53281..53505 - 225 NuclAT_0 - Antitoxin Detail
- () 53281..53505 - 225 NuclAT_0 - Antitoxin Detail
- () 53281..53505 - 225 NuclAT_0 - Antitoxin Detail
- () 53281..53505 - 225 NuclAT_0 - Antitoxin Detail
JCR35_RS28075 () 53517..54236 - 720 WP_001276217.1 plasmid SOS inhibition protein A -
JCR35_RS28080 () 54233..54667 - 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
JCR35_RS28085 () 54736..56759 - 2024 Protein_66 ParB/RepB/Spo0J family partition protein -
JCR35_RS28090 () 56820..57053 - 234 WP_000006003.1 DUF905 family protein -
JCR35_RS28095 () 57111..57638 - 528 WP_000290834.1 single-stranded DNA-binding protein -
JCR35_RS28100 () 58481..59044 - 564 WP_015059007.1 class I SAM-dependent methyltransferase -
JCR35_RS28105 () 59091..60452 - 1362 WP_000170695.1 DUF3560 domain-containing protein -
JCR35_RS28110 () 60504..60734 - 231 WP_000218642.1 hypothetical protein -
JCR35_RS28115 () 62134..63801 + 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
JCR35_RS28120 () 64115..64306 - 192 WP_001027493.1 hypothetical protein -
JCR35_RS28125 () 64303..64725 - 423 WP_000271762.1 DUF1380 family protein -
JCR35_RS28130 () 64772..65197 - 426 WP_001198928.1 antirestriction protein -
JCR35_RS28135 () 65615..66391 - 777 WP_001383963.1 hypothetical protein -
JCR35_RS28140 () 66442..66876 - 435 WP_000274503.1 DUF1380 family protein -
JCR35_RS28145 () 66890..67111 - 222 WP_001104881.1 hypothetical protein -
JCR35_RS28150 () 67112..67795 - 684 WP_000085883.1 DNA methylase -
JCR35_RS28155 () 67872..68165 - 294 WP_032146011.1 hypothetical protein -
JCR35_RS28160 () 68312..69274 + 963 WP_000959884.1 plasmid segregation protein ParM -
JCR35_RS28165 () 69277..69627 + 351 WP_000361389.1 plasmid partitioning/stability family protein -
JCR35_RS28170 () 69750..70031 - 282 WP_001333089.1 hypothetical protein -
JCR35_RS28175 () 70159..70393 - 235 Protein_84 type II toxin-antitoxin system RelE/ParE family toxin -
JCR35_RS28180 () 71842..71982 - 141 WP_071557810.1 hypothetical protein -
JCR35_RS28185 () 71973..72677 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
JCR35_RS28190 () 72765..73046 + 282 WP_015059004.1 sodium/hydrogen exchanger -
JCR35_RS28195 () 73127..73882 - 756 WP_012372818.1 16S rRNA (guanine(1405)-N(7))-methyltransferase ARG
JCR35_RS28200 () 74052..74912 - 861 WP_000027057.1 Beta-lactamase TEM ARG
JCR35_RS28205 () 75095..75631 - 537 WP_064441864.1 Tn3 family transposase TnpR_Tn3 Transposase
JCR35_RS28210 () 75723..75911 + 189 WP_000957857.1 hypothetical protein -
JCR35_RS28215 () 75921..76538 + 618 Protein_92 IS91 family transposase ISSbo1 Transposase
JCR35_RS28220 () 76589..77293 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS28225 () 77679..78095 + 417 WP_014839980.1 Glutathione transferase FosA ARG
JCR35_RS28230 () 78100..78618 - 519 WP_014839979.1 hypothetical protein -
JCR35_RS28235 () 78684..79388 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS28240 () 79451..79708 - 258 Protein_97 IS6 family transposase IS15 Transposase
JCR35_RS28245 () 79783..80487 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS28250 () 80540..83479 - 2940 Protein_99 Tn3 family transposase TnpA_TnAs1 Transposase
JCR35_RS28255 () 83483..84043 - 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
JCR35_RS28260 () 84435..85052 + 618 Protein_101 replication protein -
JCR35_RS28265 () 85586..85864 + 279 WP_013213990.1 hypothetical protein -
JCR35_RS28270 () 85975..86400 + 426 WP_013213989.1 antirestriction protein -
JCR35_RS28275 () 86528..86683 + 156 WP_013213988.1 hypothetical protein -
JCR35_RS28280 () 86729..87025 + 297 WP_013213987.1 transcriptional regulator -
JCR35_RS28285 () 87129..88010 + 882 Protein_106 IS1182 family transposase ISKpn6 Transposase
JCR35_RS28290 () 88260..89141 - 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
JCR35_RS28295 () 89417..90397 - 981 WP_013213985.1 IS481 family transposase ISKpn27 Transposase
JCR35_RS28300 () 90520..90981 - 462 Protein_109 Tn3 family transposase TnpR_Tn3 Transposase
JCR35_RS28305 () 91033..91737 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS28310 () 91802..92974 - 1173 Protein_111 transposase -
JCR35_RS28315 () 93049..93717 - 669 WP_001300294.1 putative signaling protein VF
JCR35_RS28320 () 93753..93989 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
JCR35_RS28325 () 93986..94347 - 362 Protein_114 mercury resistance co-regulator MerD -
JCR35_RS28330 () 94365..96059 - 1695 WP_000105636.1 mercury(II) reductase -
JCR35_RS28335 () 96111..96533 - 423 WP_001340589.1 organomercurial transporter MerC -
JCR35_RS28340 () 96569..96844 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
JCR35_RS28345 () 96858..97208 - 351 WP_001294663.1 mercuric transport protein MerT -
JCR35_RS28350 () 97280..97714 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
JCR35_RS28355 () 97793..98797 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
JCR35_RS28360 () 99077..99349 - 273 Protein_121 IS5 family transposase ISPan1 Transposase
JCR35_RS28365 () 99378..100075 - 698 Protein_122 IS1 family transposase ISKpn14 Transposase
JCR35_RS28370 () 100331..101353 - 1023 WP_000361404.1 helicase UvrD -
JCR35_RS28375 () 101338..102900 - 1563 WP_004206609.1 AAA family ATPase -
JCR35_RS28380 () 102974..103390 - 417 WP_001044770.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
JCR35_RS28385 () 103387..103617 - 231 WP_001261282.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein -
JCR35_RS28390 () 103574..104035 + 462 WP_014343465.1 hypothetical protein -
JCR35_RS28395 () 104196..105140 + 945 WP_011977810.1 hypothetical protein -
JCR35_RS28400 () 105177..105569 + 393 WP_011977811.1 hypothetical protein -
JCR35_RS28405 () 105627..106148 + 522 WP_013214008.1 hypothetical protein -
JCR35_RS28410 () 106194..106397 + 204 WP_011977813.1 hypothetical protein -
JCR35_RS28415 () 106427..107431 + 1005 WP_011977814.1 hypothetical protein -
JCR35_RS28420 () 107615..108394 + 780 WP_013214009.1 site-specific integrase -
JCR35_RS28425 () 108440..108697 - 258 WP_013214010.1 hypothetical protein -
JCR35_RS28430 () 108826..108939 - 114 WP_014343462.1 hypothetical protein -
JCR35_RS28435 () 109475..110341 + 867 WP_004118283.1 replication initiation protein -
JCR35_RS28440 () 111451..112656 + 1206 WP_011977818.1 AAA family ATPase -
JCR35_RS28445 () 112656..113630 + 975 WP_011977819.1 ParB/RepB/Spo0J family partition protein -
JCR35_RS28450 () 113712..114983 - 1272 WP_013214011.1 Y-family DNA polymerase -
JCR35_RS28455 () 114983..115414 - 432 WP_001568036.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
JCR35_RS28460 () 115821..117308 + 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
JCR35_RS28465 () 117557..118528 + 972 WP_004152353.1 mediator of plasmid stability -
JCR35_RS28470 () 118531..119202 + 672 WP_013214012.1 plasmid partitioning/stability family protein -
JCR35_RS28475 () 119265..119495 + 231 WP_001568040.1 hypothetical protein -
JCR35_RS28480 () 119932..120633 + 702 WP_001568041.1 DNA methylase -
JCR35_RS28485 () 120633..120854 + 222 WP_001568042.1 hypothetical protein -
JCR35_RS28490 () 120864..121283 + 420 WP_001568043.1 DUF1380 domain-containing protein -
JCR35_RS28495 () 121337..122104 + 768 WP_013214013.1 hypothetical protein -
JCR35_RS28500 () 122785..123213 + 429 WP_001568045.1 antirestriction protein -
JCR35_RS28505 () 123256..123762 + 507 WP_013214014.1 antirestriction protein ArdA -
JCR35_RS28510 () 123805..123996 + 192 WP_001568047.1 hypothetical protein -
JCR35_RS28515 () 124184..124438 + 255 WP_011977779.1 DNA polymerase III subunit theta -
JCR35_RS28520 () 124473..124793 + 321 WP_001568049.1 hypothetical protein -
JCR35_RS28525 () 125473..125700 + 228 WP_001568050.1 hypothetical protein -
JCR35_RS28530 () 125792..126022 + 231 WP_001568051.1 hypothetical protein -
JCR35_RS28535 () 126074..127429 + 1356 WP_014343515.1 DUF3560 domain-containing protein -
JCR35_RS28540 () 127477..128040 + 564 WP_014343514.1 methyltransferase -
JCR35_RS28545 () 128873..129415 + 543 WP_014343512.1 single-stranded DNA-binding protein -
JCR35_RS28550 () 129464..129712 + 249 WP_001568055.1 DUF905 domain-containing protein -
JCR35_RS28555 () 129782..131839 + 2058 WP_015493064.1 ParB/RepB/Spo0J family partition protein -
JCR35_RS28560 () 131884..132315 + 432 WP_001568057.1 conjugation system SOS inhibitor PsiB -
JCR35_RS28565 () 132312..133040 + 729 WP_001568058.1 plasmid SOS inhibition protein A -
JCR35_RS28570 () 133037..133363 + 327 WP_013023807.1 hypothetical protein -
JCR35_RS28575 () 133419..133793 + 375 WP_014343510.1 hypothetical protein -
JCR35_RS28580 () 134021..134179 + 159 WP_014343509.1 type I toxin-antitoxin system Hok family toxin -
JCR35_RS28585 () 134872..135144 + 273 WP_040245921.1 hypothetical protein -
JCR35_RS28590 () 135141..135491 + 351 WP_040245917.1 hypothetical protein -
JCR35_RS28595 () 135506..135823 + 318 WP_014343505.1 hypothetical protein -
JCR35_RS28600 () 136664..137020 + 357 WP_014343501.1 hypothetical protein -
JCR35_RS28605 () 137081..137293 + 213 WP_014343500.1 hypothetical protein -
JCR35_RS28610 () 137304..137528 + 225 WP_014343499.1 hypothetical protein -
JCR35_RS28615 () 137609..137929 + 321 WP_014343498.1 type II toxin-antitoxin system RelE/ParE family toxin -
JCR35_RS28620 () 137919..138197 + 279 WP_004152721.1 helix-turn-helix domain-containing protein -
JCR35_RS28625 () 139134..139955 + 822 WP_004152492.1 DUF945 domain-containing protein -
JCR35_RS28630 () 139988..140317 + 330 WP_013214015.1 hypothetical protein -
JCR35_RS28635 () 140350..140835 - 486 WP_014343495.1 hypothetical protein VF
JCR35_RS28640 () 141226..141642 + 417 WP_014343494.1 relaxosome protein TraM -
JCR35_RS28645 () 141842..142579 + 738 WP_154244330.1 conjugal transfer protein TrbJ -
JCR35_RS28650 () 142694..142900 + 207 WP_171773970.1 TraY domain-containing protein -
JCR35_RS28655 () 142962..143330 + 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
JCR35_RS28660 () 143344..143649 + 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
JCR35_RS28665 () 143669..144034 + 366 Protein_182 type IV conjugative transfer system protein TraE -
JCR35_RS28670 () 144089..144793 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JCR35_RS28675 () 144857..145018 + 162 Protein_184 DNA helicase -
JCR35_RS28680 () 145038..145784 + 747 WP_000205770.1 conjugal transfer pilus acetylase TraX -
JCR35_RS28685 () 145839..146399 + 561 WP_000139328.1 fertility inhibition protein FinO -
JCR35_RS28690 () 146531..146731 + 201 WP_015059022.1 hypothetical protein -
JCR35_RS28695 () 147117..147716 + 600 WP_032083981.1 hypothetical protein -
JCR35_RS28700 () 147880..148110 + 231 WP_001736714.1 hypothetical protein -
- () 148311..148370 - 60 NuclAT_1 - Antitoxin Detail
- () 148311..148370 - 60 NuclAT_1 - Antitoxin Detail
- () 148311..148370 - 60 NuclAT_1 - Antitoxin Detail
- () 148311..148370 - 60 NuclAT_1 - Antitoxin Detail
JCR35_RS28705 () 148415..148564 + 150 WP_001312851.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
JCR35_RS28710 () 148848..149096 + 249 WP_000083837.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance