MGE detailed information
MGE type: Mobilizable plasmid MGE length: 75554 bp
Accession: NZ_CP064388 Location: 1..75554 Organism: Escherichia coli O104:H4 strain PartB-EcoliO104H4-RM8376 Replicon: plasmid unnamed
Accession: NZ_CP064388 Location: 1..75554 Organism: Escherichia coli O104:H4 strain PartB-EcoliO104H4-RM8376 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ37_RS26110 (IUJ37_25895) | 9..989 | - | 981 | WP_000019427.1 | IS5 family transposase ISKpn26 | Transposase |
| IUJ37_RS26115 (IUJ37_25900) | 1149..1301 | + | 153 | WP_000565591.1 | hypothetical protein | - |
| IUJ37_RS26120 | 1416..1739 | - | 324 | Protein_2 | transposase | - |
| IUJ37_RS26125 (IUJ37_25905) | 1804..2343 | - | 540 | WP_001387337.1 | isopentenyl-diphosphate Delta-isomerase | - |
| IUJ37_RS26130 (IUJ37_25910) | 2347..3375 | - | 1029 | WP_000869859.1 | class 1 isoprenoid biosynthesis enzyme | - |
| IUJ37_RS26135 (IUJ37_25915) | 3517..3690 | - | 174 | Protein_5 | integrase core domain-containing protein | - |
| IUJ37_RS26140 (IUJ37_25920) | 3811..4311 | + | 501 | WP_000033204.1 | IS3 family transposase ISEcB1 | Transposase |
| IUJ37_RS26145 (IUJ37_25925) | 4767..5060 | - | 294 | Protein_7 | integrase core domain-containing protein | - |
| IUJ37_RS26150 (IUJ37_25930) | 5060..5191 | + | 132 | Protein_8 | IS3 family transposase | - |
| IUJ37_RS26155 (IUJ37_25935) | 5327..6865 | - | 1539 | WP_000997981.1 | IS66 family transposase ISEc8 | Transposase |
| IUJ37_RS26160 (IUJ37_25940) | 6915..7262 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| IUJ37_RS26165 (IUJ37_25945) | 7259..7639 | - | 381 | WP_001401984.1 | IS66 family transposase ISEc8 | Transposase |
| IUJ37_RS26170 (IUJ37_25950) | 7738..8007 | + | 270 | Protein_12 | ISL3 family transposase | - |
| IUJ37_RS26175 (IUJ37_25955) | 8057..8296 | - | 240 | Protein_13 | IS21 family transposase ISSso4 | Transposase |
| IUJ37_RS26180 (IUJ37_25960) | 8433..8936 | - | 504 | WP_001390509.1 | hypothetical protein | VF |
| IUJ37_RS26185 (IUJ37_25965) | 9038..9473 | - | 436 | Protein_15 | Protein AggB | VF |
| IUJ37_RS26190 (IUJ37_25970) | 9487..12015 | - | 2529 | WP_000858405.1 | F1 capsule-anchoring protein | VF |
| IUJ37_RS26195 (IUJ37_25975) | 12029..12787 | - | 759 | WP_000702455.1 | Chaperone protein caf1M | VF |
| IUJ37_RS26200 (IUJ37_25980) | 13223..13457 | + | 235 | Protein_18 | hypothetical protein | - |
| IUJ37_RS26205 | 13483..13566 | + | 84 | Protein_19 | IS91 family transposase ISSbo1 | Transposase |
| IUJ37_RS26210 (IUJ37_25990) | 13624..14190 | - | 567 | WP_032159540.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IUJ37_RS26215 (IUJ37_25995) | 14195..14320 | - | 126 | Protein_21 | 3'-5' exonuclease | - |
| IUJ37_RS26220 (IUJ37_26000) | 14322..14699 | + | 378 | WP_000457137.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IUJ37_RS26225 (IUJ37_26005) | 14699..15972 | + | 1274 | Protein_23 | translesion error-prone DNA polymerase V subunit UmuC | - |
| IUJ37_RS26230 (IUJ37_26010) | 15974..16390 | - | 417 | WP_001278815.1 | plasmid partitioning/stability family protein | - |
| IUJ37_RS26235 (IUJ37_26015) | 16383..17363 | - | 981 | WP_000688504.1 | plasmid segregation protein ParM | - |
| IUJ37_RS26240 (IUJ37_26020) | 17777..18085 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| IUJ37_RS26245 (IUJ37_26025) | 18172..18816 | - | 645 | WP_001144032.1 | ParA family protein | - |
| IUJ37_RS26250 (IUJ37_26030) | 18995..19801 | - | 807 | WP_000016961.1 | site-specific integrase | - |
| IUJ37_RS26255 (IUJ37_26035) | 19802..20107 | - | 306 | WP_001159872.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IUJ37_RS26260 (IUJ37_26040) | 20109..20327 | - | 219 | WP_000813638.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IUJ37_RS26265 (IUJ37_26045) | 20922..21152 | + | 231 | WP_001261288.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| IUJ37_RS26270 (IUJ37_26050) | 21176..21577 | + | 402 | WP_001392130.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IUJ37_RS26275 (IUJ37_26055) | 21660..21815 | - | 156 | WP_000332512.1 | transposase domain-containing protein | - |
| IUJ37_RS26280 (IUJ37_26060) | 22901..23878 | + | 978 | WP_001387465.1 | RepB family plasmid replication initiator protein | - |
| IUJ37_RS26285 (IUJ37_26065) | 24157..24897 | - | 741 | WP_001066951.1 | tyrosine-type recombinase/integrase | - |
| IUJ37_RS26290 (IUJ37_26070) | 25018..25173 | - | 156 | WP_044713270.1 | hypothetical protein | - |
| IUJ37_RS26295 | 25266..25556 | - | 291 | Protein_37 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IUJ37_RS26300 (IUJ37_26080) | 25543..25811 | - | 269 | Protein_38 | type II toxin-antitoxin system ParD family antitoxin | - |
| IUJ37_RS26305 (IUJ37_26085) | 25880..26155 | - | 276 | WP_000421273.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUJ37_RS26310 (IUJ37_26090) | 26155..26439 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| IUJ37_RS26315 (IUJ37_26095) | 27347..28175 | - | 829 | Protein_41 | incFII family plasmid replication initiator RepA | - |
| IUJ37_RS26320 (IUJ37_26100) | 28168..28242 | - | 75 | WP_014966221.1 | RepA leader peptide Tap | - |
| IUJ37_RS26330 (IUJ37_26110) | 28480..28734 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| IUJ37_RS26335 (IUJ37_26115) | 29015..29995 | + | 981 | WP_000019427.1 | IS5 family transposase ISKpn26 | Transposase |
| IUJ37_RS26340 (IUJ37_26120) | 30446..30658 | - | 213 | Protein_45 | ANR family transcriptional regulator | - |
| IUJ37_RS26345 (IUJ37_26125) | 30723..31400 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| IUJ37_RS26350 (IUJ37_26130) | 31400..31747 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| IUJ37_RS26355 (IUJ37_26135) | 31767..33338 | + | 1572 | WP_000381397.1 | IS66 family transposase ISCro1 | Transposase |
| IUJ37_RS26360 (IUJ37_26140) | 33392..33670 | - | 279 | Protein_49 | transposase domain-containing protein | - |
| IUJ37_RS26365 (IUJ37_26145) | 33693..33947 | - | 255 | Protein_50 | IS66 family transposase ISEc47 | Transposase |
| IUJ37_RS26370 (IUJ37_26150) | 33944..34378 | - | 435 | WP_001387845.1 | IS66 family transposase ISEc43 | Transposase |
| IUJ37_RS26375 (IUJ37_26155) | 34607..35167 | - | 561 | WP_000139330.1 | fertility inhibition protein FinO | - |
| IUJ37_RS26380 (IUJ37_26160) | 35222..35968 | - | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| IUJ37_RS26385 (IUJ37_26165) | 35988..40659 | - | 4672 | Protein_54 | Multifunctional conjugation protein TraI | Relaxase |
| IUJ37_RS26670 | 40715..40990 | + | 276 | WP_001386623.1 | IS1 family transposase IS1A | Transposase |
| IUJ37_RS26675 | 41012..41401 | + | 390 | WP_032350912.1 | IS1 family transposase | - |
| IUJ37_RS26395 (IUJ37_26175) | 41395..41865 | - | 471 | WP_001390489.1 | PAS domain-containing protein | - |
| IUJ37_RS26400 (IUJ37_26180) | 42059..42442 | - | 384 | WP_001151564.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| IUJ37_RS26405 (IUJ37_26185) | 42728..43375 | + | 648 | WP_000614287.1 | hypothetical protein | VF |
| IUJ37_RS26410 (IUJ37_26190) | 43693..44493 | - | 801 | WP_001234427.1 | DUF932 domain-containing protein | - |
| IUJ37_RS26415 (IUJ37_26195) | 44702..44990 | - | 289 | Protein_61 | DUF4158 domain-containing protein | - |
| IUJ37_RS26420 (IUJ37_26200) | 45120..45758 | + | 639 | Protein_62 | recombinase family protein | - |
| IUJ37_RS26425 (IUJ37_26205) | 46067..50161 | + | 4095 | WP_001034126.1 | Serine protease SepA autotransporter | VF |
| IUJ37_RS26430 (IUJ37_26210) | 50456..50644 | - | 189 | Protein_64 | IS66 family transposase IS682 | Transposase |
| IUJ37_RS26435 (IUJ37_26215) | 50755..51189 | + | 435 | WP_001387845.1 | IS66 family transposase ISEc43 | Transposase |
| IUJ37_RS26440 (IUJ37_26220) | 51186..51536 | + | 351 | WP_000624736.1 | IS66 family transposase ISEc47 | Transposase |
| IUJ37_RS26445 (IUJ37_26225) | 51567..52991 | + | 1425 | Protein_67 | IS66 family transposase ISEc43 | Transposase |
| IUJ37_RS26450 (IUJ37_26230) | 53245..54378 | - | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| IUJ37_RS26460 (IUJ37_26235) | 55353..56564 | - | 1212 | WP_000673201.1 | dispersin export-associated protein AatD | - |
| IUJ37_RS26465 (IUJ37_26240) | 56581..57210 | - | 630 | WP_000621743.1 | dispersin export ABC transporter ATP-binding protein AatC | - |
| IUJ37_RS26470 (IUJ37_26245) | 57203..58024 | - | 822 | WP_000810824.1 | dispersin export-associated protein AatB | - |
| IUJ37_RS26475 (IUJ37_26250) | 57921..59159 | - | 1239 | WP_001216021.1 | dispersin export ABC transporter outer membrane protein AatA | - |
| IUJ37_RS26480 (IUJ37_26255) | 59156..60286 | - | 1131 | WP_000209219.1 | dispersin export ABC transporter permease subunit AatP | - |
| IUJ37_RS26485 (IUJ37_26260) | 60666..60836 | + | 171 | Protein_74 | IS3 family transposase | - |
| IUJ37_RS26490 | 60997..61194 | + | 198 | Protein_75 | IS66 family transposase IS682 | Transposase |
| IUJ37_RS26495 (IUJ37_26270) | 61328..63059 | - | 1732 | Protein_76 | Serine protease SepA autotransporter | VF |
| IUJ37_RS26500 (IUJ37_26275) | 63370..64398 | - | 1029 | Protein_77 | IS630 family transposase | - |
| IUJ37_RS26505 (IUJ37_26280) | 64581..64781 | - | 201 | WP_000643555.1 | AggR-activated transcriptional regulator Aar | - |
| IUJ37_RS26510 (IUJ37_26285) | 64887..65202 | - | 316 | Protein_79 | hypothetical protein | - |
| IUJ37_RS26515 (IUJ37_26290) | 65374..66354 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| IUJ37_RS26520 (IUJ37_26295) | 66711..67061 | + | 351 | WP_000721276.1 | hypothetical protein | VF |
| IUJ37_RS26525 (IUJ37_26300) | 67265..67738 | - | 474 | Protein_82 | IS3 family transposase IS629 | Transposase |
| IUJ37_RS26530 (IUJ37_26305) | 67828..69210 | - | 1383 | Protein_83 | group II intron reverse transcriptase/maturase | - |
| IUJ37_RS26535 (IUJ37_26310) | 69267..70379 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| IUJ37_RS26540 (IUJ37_26315) | 70546..70701 | - | 156 | WP_000587091.1 | hypothetical protein | - |
| IUJ37_RS26545 (IUJ37_26320) | 71359..72098 | - | 740 | Protein_86 | IS3 family transposase IS1203 | Transposase |
| IUJ37_RS26550 (IUJ37_26325) | 72155..72304 | - | 150 | Protein_87 | IS3 family transposase | - |
| IUJ37_RS26555 (IUJ37_26330) | 72294..72616 | + | 323 | Protein_88 | IS3 family transposase | - |
| IUJ37_RS26560 (IUJ37_26335) | 72832..73629 | + | 798 | WP_000769457.1 | CFA/I fimbrial subunit D | VF |
| IUJ37_RS26680 | 73730..73822 | + | 93 | Protein_90 | IS1 family transposase ISEc30 | Transposase |
| IUJ37_RS26570 (IUJ37_26345) | 73856..74101 | + | 246 | Protein_91 | IS1 family transposase ISEc30 | Transposase |
| IUJ37_RS26575 (IUJ37_26350) | 74377..75380 | - | 1004 | Protein_92 | IS110 family transposase ISPlu13 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|