MGE detailed information
MGE type: Genomic_island MGE length: 14289 bp
Accession: NZ_CP064385 Location: 3940134..3954422 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Accession: NZ_CP064385 Location: 3940134..3954422 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ38_RS18965 () | 3935158..3935604 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| IUJ38_RS18970 () | 3935623..3939717 | + | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| IUJ38_RS18975 () | 3939711..3939974 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| IUJ38_RS18980 () | 3940038..3940907 | + | 870 | Protein_3701 | Protein RhsC | VF |
| IUJ38_RS18985 () | 3940901..3941347 | + | 447 | WP_000935097.1 | protein SciX | - |
| IUJ38_RS18990 () | 3941910..3942347 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| IUJ38_RS18995 () | 3942400..3942675 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 3942410..3942832 | + | 423 | - | - | Antitoxin Detail |
| IUJ38_RS19000 () | 3942917..3943033 | + | 117 | WP_227457392.1 | hypothetical protein | - |
| IUJ38_RS19005 () | 3943116..3943424 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| IUJ38_RS19010 () | 3943526..3943774 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| IUJ38_RS19015 () | 3943827..3944531 | + | 705 | Protein_3708 | integrase core domain-containing protein | - |
| IUJ38_RS19020 () | 3945281..3945793 | + | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| IUJ38_RS19025 () | 3945877..3946614 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| IUJ38_RS19030 () | 3946638..3949148 | + | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| IUJ38_RS19035 () | 3949170..3949640 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| IUJ38_RS19040 () | 3950046..3950867 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| IUJ38_RS19045 () | 3950950..3951190 | + | 241 | Protein_3714 | PerC family transcriptional regulator | - |
| IUJ38_RS19050 () | 3951682..3952629 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| IUJ38_RS19055 () | 3952746..3952961 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| IUJ38_RS19060 () | 3952965..3953684 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| IUJ38_RS19065 () | 3954015..3954422 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| IUJ38_RS19070 () | 3954793..3955560 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| IUJ38_RS19075 () | 3955669..3958113 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| IUJ38_RS19080 () | 3958353..3958931 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0 |