MGE detailed information
MGE type: Conjugative plasmid MGE length: 149434 bp
Accession: NZ_CP063516 Location: 1..149434 Organism: Escherichia coli strain EH01-18-04-A Replicon: plasmid pEH01-18-04-A_1
Accession: NZ_CP063516 Location: 1..149434 Organism: Escherichia coli strain EH01-18-04-A Replicon: plasmid pEH01-18-04-A_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS17_RS24555 () | 92..376 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IQS17_RS24560 () | 363..908 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IQS17_RS24565 () | 838..1185 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| IQS17_RS24570 () | 1133..1558 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| IQS17_RS24575 () | 1545..2918 | + | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| IQS17_RS24580 () | 2915..5734 | + | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IQS17_RS24585 () | 5753..6250 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| IQS17_RS24590 () | 6282..7013 | + | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| IQS17_RS24595 () | 7216..7995 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| IQS17_RS24600 () | 7992..10208 | + | 2217 | WP_023356304.1 | type IV conjugative transfer system coupling protein TraD | - |
| IQS17_RS24605 () | 10208..15478 | + | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| IQS17_RS24610 () | 15498..16244 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| IQS17_RS24615 () | 16299..16859 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| IQS17_RS24620 () | 16990..17202 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| IQS17_RS24625 () | 17761..18186 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| IQS17_RS24630 () | 18183..18533 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| IQS17_RS24635 () | 18563..20175 | + | 1613 | Protein_16 | IS66 family transposase ISEc23 | Transposase |
| IQS17_RS24640 () | 20253..20539 | + | 287 | Protein_17 | DUF2726 domain-containing protein | - |
| - () | 20506..20566 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 20506..20566 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 20506..20566 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 20506..20566 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| IQS17_RS24645 () | 20611..20745 | + | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IQS17_RS24650 () | 21042..21296 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| IQS17_RS24655 () | 21402..21536 | + | 135 | Protein_20 | protein CopA/IncA | - |
| IQS17_RS24660 () | 21533..21607 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| IQS17_RS24665 () | 21600..22457 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| IQS17_RS24670 () | 23397..24050 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| IQS17_RS24675 () | 24143..24400 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| IQS17_RS24680 () | 24333..24734 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| IQS17_RS24685 () | 25019..26329 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| IQS17_RS24690 () | 26358..26456 | + | 99 | Protein_27 | IS1 family transposase | - |
| IQS17_RS24695 () | 26606..27466 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IQS17_RS24700 () | 27588..28292 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IQS17_RS24705 () | 28345..28851 | + | 507 | Protein_30 | transposase | - |
| IQS17_RS24710 () | 28860..29720 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| IQS17_RS24715 () | 29752..30951 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| IQS17_RS24720 () | 31057..31683 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IQS17_RS24725 () | 31715..31951 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| IQS17_RS24730 () | 32005..32841 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| IQS17_RS24735 () | 32841..33644 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| IQS17_RS24740 () | 33705..34520 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| IQS17_RS24745 () | 34828..35004 | - | 177 | Protein_38 | replication protein C | - |
| IQS17_RS24750 () | 35065..35769 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS17_RS24755 () | 35891..36796 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| IQS17_RS24760 () | 36793..38031 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| IQS17_RS24765 () | 38031..38615 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| IQS17_RS24770 () | 39108..39872 | - | 765 | WP_203075381.1 | IS6 family transposase IS6100 | Transposase |
| IQS17_RS24775 () | 39990..40055 | - | 66 | Protein_44 | EAL domain-containing protein | - |
| IQS17_RS24780 () | 40099..40404 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| IQS17_RS24785 () | 40415..41620 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| IQS17_RS24790 () | 41776..41979 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| IQS17_RS24795 () | 42107..42946 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| IQS17_RS24800 () | 42940..43287 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| IQS17_RS24805 () | 43493..44281 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| IQS17_RS24810 () | 44412..44885 | - | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| IQS17_RS24815 () | 45043..45792 | + | 750 | Protein_52 | IS91 family transposase ISAzo26 | Transposase |
| IQS17_RS24820 () | 45851..46555 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IQS17_RS24825 () | 46605..46823 | - | 219 | Protein_54 | IS4 family transposase | - |
| IQS17_RS24830 () | 46838..47535 | - | 698 | Protein_55 | IS1 family transposase IS1X2 | Transposase |
| IQS17_RS24835 () | 47735..47848 | + | 114 | Protein_56 | IS6 family transposase | - |
| IQS17_RS24840 () | 47998..48156 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| IQS17_RS24845 () | 48146..48652 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| IQS17_RS24850 () | 48835..49650 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| IQS17_RS24855 () | 49997..51883 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| IQS17_RS24860 () | 51924..52451 | + | 528 | WP_000178050.1 | iron transporter | - |
| IQS17_RS24865 () | 52555..53934 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| IQS17_RS24870 () | 53937..55220 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| IQS17_RS24875 () | 55210..56340 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| IQS17_RS24880 () | 56345..57040 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| IQS17_RS24885 () | 57027..57512 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| IQS17_RS24890 () | 57537..58022 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| IQS17_RS24895 () | 58144..58777 | + | 634 | Protein_68 | histidine-type phosphatase | - |
| IQS17_RS24900 () | 58927..59100 | - | 174 | Protein_69 | IS5 family transposase ISKpn26 | Transposase |
| IQS17_RS24905 () | 59101..59415 | - | 315 | Protein_70 | IS5 family transposase ISKpn26 | Transposase |
| IQS17_RS24910 () | 60088..60827 | - | 740 | Protein_71 | IS3 family transposase IS629 | Transposase |
| IQS17_RS24915 () | 60929..61189 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| IQS17_RS24920 () | 61186..61695 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| IQS17_RS24925 () | 61715..62062 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| IQS17_RS24930 () | 62191..62526 | + | 336 | WP_001080732.1 | colicin transporter | - |
| IQS17_RS24935 () | 64098..64645 | + | 548 | Protein_76 | replication initiation protein | - |
| IQS17_RS24940 () | 64977..65852 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| IQS17_RS24945 () | 65860..66636 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| IQS17_RS24950 () | 66805..69066 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| IQS17_RS24955 () | 69135..70310 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| IQS17_RS24960 () | 70833..71138 | - | 306 | Protein_81 | IS91 family transposase ISSbo1 | Transposase |
| IQS17_RS24965 () | 71164..71903 | + | 740 | Protein_82 | IS3 family transposase IS629 | Transposase |
| IQS17_RS24970 () | 72576..74085 | + | 1510 | Protein_83 | group II intron reverse transcriptase/maturase | - |
| IQS17_RS24975 () | 74175..74558 | + | 384 | Protein_84 | IS3 family transposase IS629 | Transposase |
| IQS17_RS24980 () | 74587..74991 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| IQS17_RS24985 () | 74988..75335 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| IQS17_RS24990 () | 75384..76329 | + | 946 | Protein_87 | IS66 family transposase ISEc8 | Transposase |
| IQS17_RS24995 () | 76415..77437 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| IQS17_RS25000 () | 77434..78216 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| IQS17_RS25005 () | 78284..78892 | + | 609 | Protein_90 | IS66 family transposase ISEc22 | Transposase |
| IQS17_RS25010 () | 78955..79746 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| IQS17_RS25015 () | 79753..81723 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| IQS17_RS25020 () | 82005..82441 | + | 437 | Protein_93 | IS3 family transposase IS2 | Transposase |
| IQS17_RS25025 () | 82966..83238 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| IQS17_RS25030 () | 83684..83859 | + | 176 | Protein_95 | IS3 family transposase | - |
| IQS17_RS25035 () | 84085..85254 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| IQS17_RS25040 () | 85621..85809 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| IQS17_RS25045 () | 85930..86670 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| IQS17_RS25050 () | 86955..87932 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| IQS17_RS25055 () | 88718..89449 | + | 732 | WP_001617898.1 | hypothetical protein | - |
| IQS17_RS25060 () | 89818..90066 | - | 249 | Protein_101 | abortive infection family protein | - |
| IQS17_RS25065 () | 90124..90821 | + | 698 | Protein_102 | IS1 family transposase IS1R | Transposase |
| IQS17_RS25070 () | 90837..91166 | + | 330 | Protein_103 | TOBE domain-containing protein | - |
| IQS17_RS25075 () | 91275..92207 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| IQS17_RS25080 () | 92194..93597 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| IQS17_RS25085 () | 93805..94821 | + | 1017 | WP_012372828.1 | IS5 family transposase IS5D | Transposase |
| IQS17_RS25090 () | 95049..95366 | + | 318 | WP_001513659.1 | hypothetical protein | - |
| IQS17_RS25095 () | 95316..95729 | - | 414 | Protein_108 | IS3 family transposase ISLad1 | Transposase |
| IQS17_RS25100 () | 95653..96012 | - | 360 | WP_001513660.1 | hypothetical protein | - |
| IQS17_RS25105 () | 96040..96219 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| IQS17_RS25110 () | 96224..96604 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| IQS17_RS25115 () | 96604..96825 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IQS17_RS25120 () | 97008..98564 | + | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| IQS17_RS25125 () | 98561..99844 | + | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| IQS17_RS25130 () | 99966..103082 | + | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| IQS17_RS25135 () | 103296..103993 | + | 698 | Protein_116 | IS1 family transposase IS1G | Transposase |
| IQS17_RS25140 () | 104130..105062 | - | 933 | WP_000991832.1 | hypothetical protein | - |
| IQS17_RS25145 () | 105066..106061 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| IQS17_RS25150 () | 106769..106987 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IQS17_RS25155 () | 106989..107294 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IQS17_RS25160 () | 107295..108101 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| IQS17_RS25165 () | 108875..109630 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| IQS17_RS25170 () | 110218..111384 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| IQS17_RS25175 () | 111384..112355 | + | 972 | WP_126122099.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IQS17_RS25180 () | 113222..114124 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| IQS17_RS25185 () | 114128..114432 | + | 305 | Protein_126 | hypothetical protein | - |
| IQS17_RS25190 () | 114509..115192 | + | 684 | WP_000086185.1 | DNA methylase | - |
| IQS17_RS25195 () | 115193..115414 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| IQS17_RS25200 () | 115428..115862 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| IQS17_RS25205 () | 115913..116689 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| IQS17_RS25210 () | 117229..117531 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| IQS17_RS25215 () | 117578..118000 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| IQS17_RS25220 () | 117997..118188 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| IQS17_RS25225 () | 119223..119453 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| IQS17_RS25230 () | 119505..120866 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| IQS17_RS25235 () | 120914..121477 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| IQS17_RS25240 () | 121503..121745 | + | 243 | WP_001617878.1 | hypothetical protein | - |
| IQS17_RS25245 () | 122388..122927 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| IQS17_RS25250 () | 122990..123223 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| IQS17_RS25255 () | 123289..125247 | + | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| IQS17_RS25260 () | 125302..125736 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| IQS17_RS25265 () | 125733..126452 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| - () | 126464..126650 | + | 187 | NuclAT_0 | - | - |
| - () | 126464..126650 | + | 187 | NuclAT_0 | - | - |
| - () | 126464..126650 | + | 187 | NuclAT_0 | - | - |
| - () | 126464..126650 | + | 187 | NuclAT_0 | - | - |
| IQS17_RS25270 () | 126698..128066 | + | 1369 | Protein_143 | IS3-like element IS150 family transposase | - |
| - () | 128093..128133 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 128093..128133 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 128093..128133 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 128093..128133 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| IQS17_RS25275 () | 128177..128335 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IQS17_RS25280 () | 128778..129113 | + | 336 | WP_013023876.1 | hypothetical protein | - |
| IQS17_RS25285 () | 129026..129232 | + | 207 | WP_000275859.1 | hypothetical protein | - |
| IQS17_RS25290 () | 129257..129544 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| IQS17_RS25295 () | 129663..130484 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| IQS17_RS25300 () | 130781..131383 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| IQS17_RS25305 () | 131714..132097 | + | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| IQS17_RS25310 () | 132231..132908 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| IQS17_RS25315 () | 132996..133223 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| IQS17_RS25320 () | 133257..133619 | + | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| IQS17_RS25325 () | 133624..133935 | + | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| IQS17_RS25330 () | 133957..134523 | + | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| IQS17_RS25335 () | 134534..135238 | + | 705 | WP_148725207.1 | type-F conjugative transfer system secretin TraK | - |
| IQS17_RS25340 () | 135238..136689 | + | 1452 | WP_000146687.1 | conjugal transfer protein TraB | - |
| IQS17_RS25345 () | 136658..137245 | + | 588 | WP_013023871.1 | conjugal transfer protein TraP | - |
| IQS17_RS25350 () | 137184..137543 | + | 360 | WP_001617876.1 | conjugal transfer protein TrbD | - |
| IQS17_RS25355 () | 137543..138058 | + | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IQS17_RS25360 () | 138193..138414 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| IQS17_RS25365 () | 138574..141201 | + | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| IQS17_RS25370 () | 141198..141584 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| IQS17_RS25375 () | 141581..142213 | + | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| IQS17_RS25380 () | 142210..143202 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| IQS17_RS25385 () | 143232..143537 | + | 306 | WP_000224413.1 | hypothetical protein | - |
| IQS17_RS25390 () | 143546..144184 | + | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IQS17_RS25395 () | 144181..146031 | + | 1851 | WP_000821866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IQS17_RS25400 () | 146058..146315 | + | 258 | WP_000864347.1 | conjugal transfer protein TrbE | - |
| IQS17_RS25405 () | 146308..147051 | + | 744 | WP_001030401.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IQS17_RS25410 () | 147181..148161 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| IQS17_RS25415 () | 148316..149013 | + | 698 | Protein_172 | IS1 family transposase IS1G | Transposase |
| IQS17_RS25420 () | 149061..149381 | + | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|