MGE detailed information
MGE type: Conjugative plasmid MGE length: 150711 bp
Accession: NZ_CP063494 Location: 1..150711 Organism: Escherichia coli strain EF5-18-41 Replicon: plasmid pEF5-18-41_2
Accession: NZ_CP063494 Location: 1..150711 Organism: Escherichia coli strain EF5-18-41 Replicon: plasmid pEF5-18-41_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS14_RS26735 () | 28..766 | + | 739 | Protein_0 | IS3 family transposase IS629 | Transposase |
| IQS14_RS26740 () | 1439..2947 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| IQS14_RS26745 () | 3031..3510 | + | 480 | Protein_2 | IS3 family transposase IS629 | Transposase |
| IQS14_RS26750 () | 3553..3858 | - | 306 | Protein_3 | IS3 family transposase ISEcB1 | Transposase |
| IQS14_RS26755 () | 3994..4719 | + | 726 | Protein_4 | IS256 family transposase IS1414 | Transposase |
| IQS14_RS26760 () | 4908..8405 | - | 3498 | WP_203154843.1 | Outer membrane protein IcsA autotransporter | VF |
| IQS14_RS26765 () | 8991..9236 | - | 246 | Protein_6 | IS91 family transposase ISEc37 | Transposase |
| IQS14_RS26775 () | 10904..11086 | + | 183 | Protein_8 | iron-containing alcohol dehydrogenase | - |
| IQS14_RS26780 () | 11241..11975 | - | 735 | WP_032354011.1 | helix-turn-helix domain-containing protein | - |
| IQS14_RS26785 () | 12065..12340 | + | 276 | WP_032354012.1 | PerC family transcriptional regulator | - |
| IQS14_RS26790 () | 12399..13607 | + | 1209 | WP_072643187.1 | IS256 family transposase IS1414 | Transposase |
| IQS14_RS26795 () | 13808..14371 | - | 564 | WP_032353959.1 | pentapeptide repeat-containing protein | - |
| IQS14_RS26800 () | 14415..14690 | - | 276 | Protein_13 | protein McbF | - |
| IQS14_RS26805 () | 14781..15146 | + | 366 | WP_032353961.1 | hypothetical protein | - |
| IQS14_RS26810 () | 15146..16333 | + | 1188 | WP_045145541.1 | IS91 family transposase ISEc37 | Transposase |
| IQS14_RS26815 () | 17187..17780 | + | 594 | WP_032353553.1 | proQ/FINO family protein | - |
| IQS14_RS26820 () | 18060..18647 | - | 588 | WP_064550130.1 | colanic acid biosynthesis acetyltransferase | - |
| IQS14_RS26825 () | 19668..19955 | - | 288 | WP_045145547.1 | hypothetical protein | - |
| IQS14_RS26830 () | 19965..20252 | - | 288 | WP_032353555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IQS14_RS26835 () | 20249..20500 | - | 252 | WP_045145550.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IQS14_RS26840 () | 20587..20754 | - | 168 | WP_045145553.1 | hypothetical protein | - |
| IQS14_RS26845 () | 21449..22321 | - | 873 | WP_045145554.1 | incFII family plasmid replication initiator RepA | - |
| IQS14_RS26850 () | 23022..23663 | + | 642 | WP_021547665.1 | hypothetical protein | - |
| IQS14_RS26855 () | 23804..24469 | + | 666 | WP_065203167.1 | traC | - |
| IQS14_RS26860 () | 24736..25356 | + | 621 | WP_072648954.1 | DUF1449 family protein | - |
| IQS14_RS26865 () | 25383..27077 | + | 1695 | WP_045145557.1 | flotillin family protein | - |
| IQS14_RS26870 () | 27083..27400 | + | 318 | WP_086795421.1 | PilI type IV pilus biogenesis protein | - |
| IQS14_RS26875 () | 27905..28300 | - | 396 | WP_021532693.1 | hypothetical protein | - |
| IQS14_RS26880 () | 28421..29491 | + | 1071 | WP_203154778.1 | hypothetical protein | VF |
| IQS14_RS26885 () | 29496..29933 | + | 438 | WP_021532695.1 | type IV pilus biogenesis protein PilM | - |
| IQS14_RS26890 () | 29964..31583 | + | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| IQS14_RS26895 () | 31604..32899 | + | 1296 | WP_106487359.1 | type 4b pilus protein PilO2 | - |
| IQS14_RS26900 () | 32889..33341 | + | 453 | WP_021547657.1 | hypothetical protein | VF |
| IQS14_RS26905 () | 33390..33944 | + | 555 | WP_072643479.1 | hypothetical protein | - |
| IQS14_RS26910 () | 34040..34636 | + | 597 | WP_029391917.1 | hypothetical protein | - |
| IQS14_RS26915 () | 34733..36241 | + | 1509 | WP_106631238.1 | Type II secretion system protein E | VF |
| IQS14_RS26920 () | 36243..37343 | + | 1101 | WP_072661742.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IQS14_RS26925 () | 37393..37929 | + | 537 | WP_021532703.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| IQS14_RS26930 () | 37988..38464 | + | 477 | WP_021532704.1 | hypothetical protein | VF |
| IQS14_RS26935 () | 38481..39131 | + | 651 | WP_045147317.1 | A24 family peptidase | - |
| IQS14_RS26940 () | 39128..40387 | + | 1260 | WP_116836912.1 | hypothetical protein | VF |
| IQS14_RS26945 () | 41348..42517 | + | 1170 | WP_021532708.1 | site-specific integrase | - |
| IQS14_RS26950 () | 42559..42849 | + | 291 | WP_021532709.1 | hypothetical protein | - |
| IQS14_RS26955 () | 42941..43261 | - | 321 | WP_000695052.1 | hypothetical protein | - |
| IQS14_RS26960 () | 43535..44356 | + | 822 | WP_001681675.1 | hypothetical protein | - |
| IQS14_RS26965 () | 44458..45660 | + | 1203 | WP_077892228.1 | conjugal transfer protein TraF | - |
| IQS14_RS26970 () | 45764..46222 | + | 459 | WP_045145391.1 | DotD/TraH family lipoprotein | - |
| IQS14_RS26975 () | 46219..47055 | + | 837 | WP_000745049.1 | hypothetical protein | VF |
| IQS14_RS26980 () | 47039..48187 | + | 1149 | WP_000775210.1 | putative protein YggR | VF |
| IQS14_RS26985 () | 48184..48474 | + | 291 | WP_084818436.1 | conjugal transfer protein | - |
| IQS14_RS26990 () | 48538..52599 | + | 4062 | WP_072648886.1 | DNA primase | - |
| IQS14_RS26995 () | 52616..52966 | + | 351 | WP_106491719.1 | conjugal transfer protein | - |
| IQS14_RS27000 () | 52978..53673 | + | 696 | WP_072661792.1 | DotI/IcmL family type IV secretion protein | - |
| IQS14_RS27005 () | 53684..54658 | + | 975 | WP_021532715.1 | hypothetical protein | VF |
| IQS14_RS27010 () | 54662..55993 | + | 1332 | WP_097313011.1 | conjugal transfer protein TraO | - |
| IQS14_RS27015 () | 55990..56703 | + | 714 | WP_072657236.1 | conjugal transfer protein TraP | - |
| IQS14_RS27020 () | 56703..57230 | + | 528 | WP_072657239.1 | conjugal transfer protein TraQ | - |
| IQS14_RS27025 () | 57277..57675 | + | 399 | WP_029391936.1 | hypothetical protein | - |
| IQS14_RS27030 () | 57732..57983 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| IQS14_RS27035 () | 57898..58716 | + | 819 | WP_072645885.1 | conjugal transfer protein TraT | - |
| IQS14_RS27040 () | 59325..62369 | + | 3045 | WP_203154776.1 | ATP-binding protein | - |
| IQS14_RS27045 () | 62369..62989 | + | 621 | WP_072643640.1 | conjugal transfer protein TraV | - |
| IQS14_RS27050 () | 62947..64152 | + | 1206 | WP_053287749.1 | conjugal transfer protein TraW | - |
| IQS14_RS27055 () | 64149..64718 | + | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| IQS14_RS27060 () | 64791..66956 | + | 2166 | WP_077252029.1 | DotA/TraY family protein | - |
| IQS14_RS27065 () | 67045..67695 | + | 651 | WP_072648919.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IQS14_RS27070 () | 67760..67969 | - | 210 | WP_000062945.1 | HEAT repeat domain-containing protein | - |
| IQS14_RS27075 () | 68351..68512 | + | 162 | WP_001138649.1 | hypothetical protein | - |
| IQS14_RS27080 () | 68509..68661 | - | 153 | WP_001536636.1 | Hok/Gef family protein | - |
| IQS14_RS27085 () | 69230..69382 | - | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| IQS14_RS27090 () | 69711..69953 | + | 243 | WP_000650933.1 | hypothetical protein | - |
| IQS14_RS27095 () | 70050..70241 | + | 192 | WP_000751583.1 | hypothetical protein | - |
| IQS14_RS27100 () | 70253..70621 | + | 369 | WP_001302696.1 | hypothetical protein | - |
| IQS14_RS27105 () | 70625..70840 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| IQS14_RS27110 () | 71038..71661 | - | 624 | WP_001155252.1 | DNA-binding protein | - |
| IQS14_RS27115 () | 71820..72287 | + | 468 | WP_151403919.1 | thermonuclease family protein | - |
| IQS14_RS27120 () | 73064..74335 | + | 1272 | WP_106491575.1 | IncI1-type conjugal transfer protein TrbA | - |
| IQS14_RS27125 () | 74332..75450 | + | 1119 | WP_001597028.1 | DsbC family protein | - |
| IQS14_RS27130 () | 75431..77560 | + | 2130 | Protein_79 | TraM recognition domain-containing protein | - |
| IQS14_RS27135 () | 77992..78984 | - | 993 | Protein_80 | IS256 family transposase IS1414 | Transposase |
| IQS14_RS27140 () | 79038..80250 | + | 1213 | Protein_81 | IS3 family transposase IS629 | Transposase |
| IQS14_RS27145 () | 80294..80512 | - | 219 | Protein_82 | IS3 family transposase IS629 | Transposase |
| IQS14_RS27150 () | 80599..80844 | - | 246 | WP_045148228.1 | hypothetical protein | - |
| IQS14_RS27160 () | 84420..85442 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| IQS14_RS27165 () | 85439..86221 | + | 783 | Protein_86 | IS21 family transposase IS100kyp | Transposase |
| IQS14_RS27170 () | 86817..87290 | - | 474 | Protein_87 | IS3 family transposase IS629 | Transposase |
| IQS14_RS27175 () | 87380..88888 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| IQS14_RS27180 () | 89561..90279 | - | 719 | Protein_89 | IS3 family transposase | - |
| IQS14_RS27185 () | 90333..90554 | + | 222 | Protein_90 | IS256 family transposase IS1414 | Transposase |
| IQS14_RS27190 () | 90590..90934 | - | 345 | WP_032354044.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| IQS14_RS27195 () | 90934..91182 | - | 249 | WP_033810804.1 | cell growth regulatory protein MazE | - |
| IQS14_RS27200 () | 91251..93953 | - | 2703 | WP_072648818.1 | Protein TraI | Relaxase |
| IQS14_RS27205 () | 93965..94297 | - | 333 | WP_072648817.1 | nikA protein | - |
| IQS14_RS27210 () | 94530..94865 | + | 336 | WP_000157103.1 | hypothetical protein | - |
| IQS14_RS27215 () | 94951..95799 | - | 849 | WP_203154828.1 | DUF4942 domain-containing protein | - |
| IQS14_RS27220 () | 96148..96345 | + | 198 | WP_024187407.1 | hypothetical protein | - |
| IQS14_RS27225 () | 96379..96630 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| IQS14_RS27230 () | 96661..96891 | - | 231 | WP_029400586.1 | hypothetical protein | VF |
| IQS14_RS27235 () | 96953..97831 | - | 879 | WP_032211189.1 | Recombination-promoting nuclease RpnA | VF |
| IQS14_RS27240 () | 97896..98162 | - | 267 | WP_001578094.1 | hypothetical protein | - |
| IQS14_RS27245 () | 98255..98689 | - | 435 | WP_000218850.1 | hypothetical protein | - |
| IQS14_RS27250 () | 98808..99416 | + | 609 | WP_203154826.1 | hypothetical protein | - |
| IQS14_RS27255 () | 99418..99918 | - | 501 | WP_000117633.1 | antirestriction protein ArdA | - |
| IQS14_RS27260 () | 100383..100979 | - | 597 | WP_045146526.1 | hypothetical protein | - |
| IQS14_RS27265 () | 100976..101695 | - | 720 | WP_045146528.1 | plasmid SOS inhibition protein A | - |
| IQS14_RS27270 () | 101692..102126 | - | 435 | WP_029391985.1 | conjugation system SOS inhibitor PsiB | - |
| IQS14_RS27275 () | 102181..104139 | - | 1959 | WP_045146531.1 | ParB/RepB/Spo0J family partition protein | - |
| IQS14_RS27280 () | 104203..104436 | - | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| IQS14_RS27285 () | 104494..105021 | - | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| IQS14_RS27290 () | 105390..105458 | + | 69 | Protein_111 | pilus protein | - |
| IQS14_RS27295 () | 105791..105982 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| IQS14_RS27300 () | 105982..106401 | - | 420 | WP_000271736.1 | DUF1380 family protein | - |
| IQS14_RS27305 () | 106448..106750 | - | 303 | WP_072770674.1 | antirestriction protein | - |
| IQS14_RS27310 () | 107279..108181 | - | 903 | WP_139244410.1 | DUF1281 domain-containing protein | - |
| IQS14_RS27315 () | 108599..108847 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| IQS14_RS27320 () | 108844..109281 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IQS14_RS27325 () | 109281..110552 | + | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| IQS14_RS27330 () | 110557..110949 | - | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| IQS14_RS27335 () | 110954..111925 | - | 972 | WP_021580010.1 | stable plasmid inheritance protein | - |
| IQS14_RS27340 () | 112154..112798 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| IQS14_RS27345 () | 112792..113067 | + | 276 | WP_001536593.1 | hypothetical protein | - |
| IQS14_RS27350 () | 113204..113701 | - | 498 | WP_072157241.1 | IS91 family transposase ISSod25 | Transposase |
| IQS14_RS27355 () | 113878..114756 | + | 879 | Protein_124 | colicin-B | - |
| IQS14_RS27360 () | 114773..115470 | - | 698 | Protein_125 | IS1 family transposase | - |
| IQS14_RS27365 () | 115527..115631 | - | 105 | Protein_126 | colicin-B | - |
| IQS14_RS27370 () | 115873..116688 | + | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| IQS14_RS27375 () | 116738..117091 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| IQS14_RS27380 () | 117264..118073 | - | 810 | WP_045145707.1 | site-specific integrase | - |
| IQS14_RS27385 () | 118074..118379 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IQS14_RS27390 () | 118381..118599 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IQS14_RS27395 () | 119548..120245 | - | 698 | Protein_132 | IS1 family transposase | - |
| IQS14_RS27400 () | 120358..120489 | + | 132 | Protein_133 | IS3 family transposase ISSfl10 | Transposase |
| IQS14_RS27405 () | 120537..120722 | + | 186 | WP_032353630.1 | hypothetical protein | - |
| IQS14_RS27410 () | 120754..121206 | - | 453 | WP_032353631.1 | N-acetyltransferase | - |
| IQS14_RS27420 () | 122848..123108 | + | 261 | WP_032353703.1 | hypothetical protein | - |
| IQS14_RS27425 () | 123105..123695 | + | 591 | WP_032353705.1 | hypothetical protein | - |
| IQS14_RS27430 () | 124216..125574 | + | 1359 | WP_032353707.1 | esterase-like activity of phytase family protein | - |
| IQS14_RS27435 () | 125628..126354 | - | 727 | Protein_140 | IS256 family transposase IS1414 | Transposase |
| IQS14_RS27440 () | 126453..126842 | + | 390 | WP_001282144.1 | IS66 family transposase ISEc8 | Transposase |
| IQS14_RS27445 () | 126839..127186 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| IQS14_RS27450 () | 127236..128773 | + | 1538 | Protein_143 | IS66 family transposase ISEc8 | Transposase |
| IQS14_RS27455 () | 128912..129187 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IQS14_RS27460 () | 129187..129471 | - | 285 | WP_072648935.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| IQS14_RS27465 () | 129972..130562 | + | 591 | WP_000086536.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IQS14_RS27470 () | 130609..130767 | + | 159 | Protein_147 | transposase | - |
| IQS14_RS27475 () | 130917..131915 | + | 999 | WP_032353474.1 | ABC transporter substrate-binding protein | - |
| IQS14_RS27480 () | 131915..132952 | + | 1038 | WP_072674995.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| IQS14_RS27485 () | 132952..133713 | + | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| IQS14_RS27490 () | 133770..134957 | + | 1188 | WP_160377741.1 | MFS transporter | - |
| IQS14_RS27495 () | 135035..135202 | - | 168 | Protein_152 | bacteriocin immunity protein | - |
| IQS14_RS27500 () | 135266..135963 | + | 698 | Protein_153 | IS1 family transposase | - |
| IQS14_RS27505 () | 135994..136173 | + | 180 | WP_077250632.1 | Hin recombinase | - |
| IQS14_RS27510 () | 136433..137296 | - | 864 | WP_021534910.1 | endonuclease/exonuclease/phosphatase family protein | - |
| IQS14_RS27515 () | 137478..138175 | - | 698 | Protein_156 | IS1 family transposase | - |
| IQS14_RS27520 () | 138406..138795 | - | 390 | WP_032354229.1 | cytochrome B562 | - |
| IQS14_RS27525 () | 139229..140119 | - | 891 | WP_000470711.1 | putative HTH-type transcriptional regulator YahB | VF |
| IQS14_RS27530 () | 140197..141420 | - | 1224 | WP_024188138.1 | cytosine permease | - |
| IQS14_RS27535 () | 141443..141832 | - | 390 | WP_001696803.1 | hypothetical protein | - |
| IQS14_RS27540 () | 141849..142805 | - | 957 | WP_032353537.1 | carbamate kinase | - |
| IQS14_RS27545 () | 142798..144222 | - | 1425 | WP_053287902.1 | DUF1116 domain-containing protein | - |
| IQS14_RS27550 () | 144219..145778 | - | 1560 | WP_000865634.1 | acyl-CoA synthetase FdrA | - |
| IQS14_RS27555 () | 145873..146733 | - | 861 | WP_072674666.1 | DUF2877 domain-containing protein | - |
| IQS14_RS27560 () | 146739..147407 | - | 669 | WP_032353458.1 | cysteine hydrolase | - |
| IQS14_RS27565 () | 147866..149353 | - | 1488 | Protein_166 | IncI1-type relaxase NikB | - |
| IQS14_RS27570 () | 149538..149768 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| IQS14_RS27575 () | 149765..150181 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | - |
| IQS14_RS27580 () | 150226..150690 | - | 465 | Protein_169 | pcar | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|