MGE detailed information
MGE type: Conjugative plasmid MGE length: 117739 bp
Accession: NZ_CP063343 Location: 1..117739 Organism: Escherichia coli strain BS90R-A Replicon: plasmid pBS90R-A_2
Accession: NZ_CP063343 Location: 1..117739 Organism: Escherichia coli strain BS90R-A Replicon: plasmid pBS90R-A_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IN877_RS23570 () | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| IN877_RS23575 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| IN877_RS23580 () | 2124..2291 | - | 168 | WP_063078056.1 | hypothetical protein | - |
| IN877_RS23585 () | 2406..3568 | - | 1163 | Protein_3 | IS3 family transposase ISEhe3 | Transposase |
| IN877_RS23590 () | 3764..7840 | + | 4077 | WP_063121986.1 | hypothetical protein | VF |
| IN877_RS23595 () | 8018..8707 | - | 690 | Protein_5 | IS3 family transposase ISEhe3 | Transposase |
| IN877_RS23600 () | 8742..8939 | - | 198 | Protein_6 | IS66 family transposase | - |
| IN877_RS23605 () | 9002..9706 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IN877_RS23610 () | 9965..10825 | + | 861 | WP_000557454.1 | hypothetical protein | ARG |
| IN877_RS23615 () | 10838..11380 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| IN877_RS23620 () | 11862..12053 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| IN877_RS23625 () | 12077..12304 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| IN877_RS23630 () | 12355..13482 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| IN877_RS23635 () | 13519..14223 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IN877_RS23640 () | 14277..14744 | + | 468 | Protein_14 | conjugal transfer protein | - |
| IN877_RS23645 () | 14989..15105 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| IN877_RS23650 () | 15121..17040 | + | 1920 | WP_025989258.1 | Peptide chain release factor 3 | VF |
| IN877_RS23655 () | 17159..17326 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| IN877_RS23660 () | 17417..20383 | - | 2967 | WP_203115769.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| IN877_RS23665 () | 20386..20946 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| IN877_RS23670 () | 21324..22028 | - | 705 | WP_205595378.1 | IS6 family transposase | - |
| IN877_RS23675 () | 22092..22187 | - | 96 | Protein_21 | (4Fe-4S)-binding protein | - |
| IN877_RS23680 () | 22268..22774 | - | 507 | WP_034167704.1 | hypothetical protein | VF |
| IN877_RS23685 () | 22771..24105 | - | 1335 | WP_034167705.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| IN877_RS23690 () | 24102..26123 | - | 2022 | WP_063085569.1 | hypothetical protein | VF |
| IN877_RS23695 () | 26133..28595 | - | 2463 | WP_034167707.1 | poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA | - |
| IN877_RS23700 () | 28938..29642 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IN877_RS23705 () | 29930..30553 | + | 624 | WP_000904945.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| IN877_RS23710 () | 30534..31871 | + | 1338 | Protein_28 | DUF4158 domain-containing protein | - |
| IN877_RS23715 () | 31923..32627 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IN877_RS23720 () | 32686..33597 | + | 912 | Protein_30 | IS4 family transposase IS10R | Transposase |
| IN877_RS23725 () | 33707..34222 | + | 516 | Protein_31 | IS4 family transposase IS10R | Transposase |
| IN877_RS23730 () | 34275..34979 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| IN877_RS23735 () | 35016..35891 | - | 876 | WP_203115733.1 | DUF262 domain-containing protein | - |
| IN877_RS23740 () | 36176..36577 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| IN877_RS23745 () | 36510..36767 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| IN877_RS23750 () | 36860..37513 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| IN877_RS23755 () | 38453..39310 | - | 858 | WP_039002220.1 | incFII family plasmid replication initiator RepA | - |
| IN877_RS23760 () | 39303..39377 | - | 75 | WP_061357229.1 | RepA leader peptide Tap | - |
| IN877_RS23765 () | 39609..39866 | - | 258 | WP_001541895.1 | replication regulatory protein RepA | - |
| IN877_RS23770 () | 40134..40340 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 40327..40388 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 40327..40388 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 40327..40388 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 40327..40388 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| IN877_RS23775 () | 40730..40942 | - | 213 | WP_001541896.1 | ANR family transcriptional regulator | - |
| IN877_RS23780 () | 41077..41637 | - | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| IN877_RS23785 () | 41692..42435 | - | 744 | WP_039002216.1 | conjugal transfer pilus acetylase TraX | - |
| IN877_RS23790 () | 42455..47725 | - | 5271 | WP_054377139.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| IN877_RS23795 () | 47725..49914 | - | 2190 | WP_039002212.1 | type IV conjugative transfer system coupling protein TraD | - |
| IN877_RS23800 () | 50167..50898 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| IN877_RS23805 () | 50930..51433 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| IN877_RS23810 () | 51448..54270 | - | 2823 | WP_001007048.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IN877_RS23815 () | 54267..55640 | - | 1374 | WP_170926237.1 | conjugal transfer protein TraH | - |
| IN877_RS23820 () | 55640..56002 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| IN877_RS23825 () | 55932..56477 | - | 546 | WP_000052613.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IN877_RS23830 () | 56464..56745 | - | 282 | WP_039002206.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IN877_RS23835 () | 56861..57604 | - | 744 | WP_039002205.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IN877_RS23840 () | 57597..57857 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| IN877_RS23845 () | 57884..59692 | - | 1809 | WP_000821844.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IN877_RS23850 () | 59689..60327 | - | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IN877_RS23855 () | 60336..61328 | - | 993 | WP_023148235.1 | conjugal transfer pilus assembly protein TraU | - |
| IN877_RS23860 () | 61325..61957 | - | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| IN877_RS23865 () | 61954..62340 | - | 387 | WP_039002198.1 | type-F conjugative transfer system protein TrbI | - |
| IN877_RS23870 () | 62337..64964 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| IN877_RS23875 () | 65124..65345 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| IN877_RS23880 () | 65480..65995 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IN877_RS23885 () | 65992..66360 | - | 369 | WP_071787938.1 | conjugal transfer protein TrbD | - |
| IN877_RS23890 () | 66299..66886 | - | 588 | WP_000002772.1 | conjugal transfer protein TraP | - |
| IN877_RS23895 () | 66876..68303 | - | 1428 | WP_000146690.1 | conjugal transfer protein TraB | - |
| IN877_RS23900 () | 68303..69007 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IN877_RS23905 () | 69018..69584 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| IN877_RS23910 () | 69606..69917 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IN877_RS23915 () | 69922..70284 | - | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| IN877_RS23920 () | 70317..70712 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| IN877_RS23925 () | 70811..71500 | - | 690 | WP_039002187.1 | conjugal transfer transcriptional regulator TraJ | - |
| IN877_RS23930 () | 71687..72070 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| IN877_RS23935 () | 72391..72993 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| IN877_RS23940 () | 73290..74111 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| IN877_RS23945 () | 74234..74521 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| IN877_RS23950 () | 75443..75601 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 75645..75869 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 75645..75869 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 75645..75869 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 75645..75869 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| IN877_RS23955 () | 75681..75869 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| IN877_RS23960 () | 75881..76600 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| IN877_RS23965 () | 76597..77031 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| IN877_RS23970 () | 77086..79044 | - | 1959 | WP_039000998.1 | ParB/RepB/Spo0J family partition protein | - |
| IN877_RS23975 () | 79109..79342 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| IN877_RS23980 () | 79399..79938 | - | 540 | WP_032332913.1 | single-stranded DNA-binding protein | - |
| IN877_RS23985 () | 79964..80170 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| IN877_RS23990 () | 80790..81353 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| IN877_RS23995 () | 81401..82762 | - | 1362 | WP_038999961.1 | DUF3560 domain-containing protein | - |
| IN877_RS24000 () | 82814..83044 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| IN877_RS24005 () | 84079..84270 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| IN877_RS24010 () | 84267..84689 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| IN877_RS24015 () | 84736..85038 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| IN877_RS24020 () | 85578..86354 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| IN877_RS24025 () | 86405..86839 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| IN877_RS24030 () | 86853..87074 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| IN877_RS24035 () | 87075..87758 | - | 684 | WP_000086185.1 | DNA methylase | - |
| IN877_RS24040 () | 87835..88139 | - | 305 | Protein_94 | hypothetical protein | - |
| IN877_RS24045 () | 88143..89045 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| IN877_RS24050 () | 89463..89711 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| IN877_RS24055 () | 89708..90145 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IN877_RS24060 () | 90145..91416 | + | 1272 | WP_000457518.1 | Y-family DNA polymerase | - |
| IN877_RS24065 () | 91421..91813 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| IN877_RS24070 () | 91818..92789 | - | 972 | WP_001103690.1 | hypothetical protein | - |
| IN877_RS24075 () | 93011..93655 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| IN877_RS24080 () | 93649..93924 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| IN877_RS24085 () | 94076..94852 | - | 777 | Protein_103 | phage integrase family protein | - |
| IN877_RS24090 () | 94849..95280 | - | 432 | WP_001707302.1 | hypothetical protein | - |
| IN877_RS24095 () | 95346..96050 | + | 705 | WP_065304467.1 | IS6-like element IS26 family transposase | - |
| IN877_RS24100 () | 96199..97524 | - | 1326 | WP_021512928.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| IN877_RS24105 () | 97634..98331 | + | 698 | Protein_107 | IS1 family transposase | - |
| IN877_RS24110 () | 98432..98713 | - | 282 | WP_000639434.1 | hypothetical protein | - |
| IN877_RS24115 () | 98815..99711 | - | 897 | Protein_109 | IS3 family transposase ISEhe3 | Transposase |
| IN877_RS24120 () | 99776..100594 | + | 819 | Protein_110 | IS30 family transposase IS30D | Transposase |
| IN877_RS24130 () | 101902..102078 | + | 177 | Protein_112 | IS30 family transposase IS30D | Transposase |
| IN877_RS24135 () | 102503..102787 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| IN877_RS24140 () | 102807..103940 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| IN877_RS24145 () | 104203..104556 | - | 354 | Protein_115 | hypothetical protein | - |
| IN877_RS24150 () | 104572..105269 | - | 698 | Protein_116 | IS1 family transposase | - |
| IN877_RS24155 () | 105325..105705 | - | 381 | Protein_117 | type I restriction endonuclease subunit R | - |
| IN877_RS24160 () | 105827..107110 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| IN877_RS24165 () | 107107..108663 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| IN877_RS24170 () | 108846..109067 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IN877_RS24175 () | 109067..109447 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| IN877_RS24180 () | 109452..109631 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| IN877_RS24185 () | 109659..110018 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| IN877_RS24190 () | 109942..110355 | + | 414 | Protein_124 | IS3 family transposase ISLad1 | Transposase |
| IN877_RS24195 () | 110305..110622 | - | 318 | WP_001513659.1 | hypothetical protein | - |
| IN877_RS24200 () | 110850..111866 | - | 1017 | WP_077253135.1 | IS5 family transposase IS5D | Transposase |
| IN877_RS24205 () | 112074..113477 | + | 1404 | WP_203115767.1 | S-methylmethionine permease | - |
| IN877_RS24210 () | 113464..114396 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| IN877_RS24215 () | 114505..114834 | - | 330 | Protein_129 | TOBE domain-containing protein | - |
| IN877_RS24220 () | 114850..115547 | - | 698 | Protein_130 | IS1 family transposase | - |
| IN877_RS24225 () | 115605..115853 | + | 249 | Protein_131 | abortive infection family protein | - |
| IN877_RS24230 () | 116142..116954 | - | 813 | WP_032333019.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|