MGE detailed information
MGE type: Conjugative plasmid MGE length: 110368 bp
Accession: NZ_CP062913 Location: 1..110368 Organism: Escherichia coli O112ab:H8 strain Res13-Lact-EA06-22 Replicon: plasmid unnamed476
Accession: NZ_CP062913 Location: 1..110368 Organism: Escherichia coli O112ab:H8 strain Res13-Lact-EA06-22 Replicon: plasmid unnamed476
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP05_RS23975 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| IMP05_RS23980 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| IMP05_RS23985 () | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| IMP05_RS23990 () | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMP05_RS23995 () | 3638..6052 | - | 2415 | Protein_4 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IMP05_RS24000 () | 6056..6616 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IMP05_RS24005 () | 6792..7142 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| IMP05_RS24010 () | 7345..8358 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| IMP05_RS24015 () | 8516..8989 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| IMP05_RS24020 () | 9120..9908 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| IMP05_RS24025 () | 10110..10814 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IMP05_RS24030 () | 10867..11622 | + | 756 | Protein_11 | IS110 family transposase IS5075 | Transposase |
| IMP05_RS24035 () | 11804..11980 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| IMP05_RS24040 () | 12310..13125 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| IMP05_RS24045 () | 13212..13454 | + | 243 | Protein_14 | phosphoglucosamine mutase | - |
| IMP05_RS24050 () | 13408..13659 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| IMP05_RS24055 () | 13690..14826 | - | 1137 | WP_023140202.1 | IS91 family transposase ISVsa3 | Transposase |
| IMP05_RS24060 () | 15193..15462 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IMP05_RS24065 () | 15459..15740 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP05_RS24070 () | 15780..16628 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| IMP05_RS24075 () | 16745..17218 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| IMP05_RS24080 () | 17695..17961 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| IMP05_RS24085 () | 17961..18455 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| IMP05_RS24090 () | 18511..19113 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| IMP05_RS24095 () | 19467..20813 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| IMP05_RS24100 () | 21092..21295 | + | 204 | Protein_25 | hypothetical protein | - |
| IMP05_RS24105 () | 21311..22008 | - | 698 | Protein_26 | IS1 family transposase IS1G | Transposase |
| IMP05_RS24110 () | 22475..23749 | + | 1275 | WP_001459502.1 | colicin-Ia | - |
| IMP05_RS24115 () | 23767..24114 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| IMP05_RS24120 () | 24233..24581 | + | 349 | Protein_29 | hypothetical protein | - |
| IMP05_RS24125 () | 24601..25191 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| IMP05_RS24130 () | 25191..25448 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| IMP05_RS24135 () | 25799..26800 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| IMP05_RS24140 () | 26976..27320 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| IMP05_RS24145 () | 27819..28073 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| IMP05_RS24150 () | 28118..29044 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| IMP05_RS24155 () | 29576..29989 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| IMP05_RS24160 () | 29991..30770 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| IMP05_RS24165 () | 30950..31594 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IMP05_RS24170 () | 31681..31989 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IMP05_RS24175 () | 32403..33383 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| IMP05_RS24180 () | 33376..33792 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| IMP05_RS24185 () | 33794..35068 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| IMP05_RS24190 () | 35068..35505 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMP05_RS24195 () | 35502..35750 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| IMP05_RS24200 () | 36168..37070 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| IMP05_RS24205 () | 37067..37378 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| IMP05_RS24210 () | 37455..38138 | + | 684 | WP_000086178.1 | DNA methylase | - |
| IMP05_RS24215 () | 38139..38360 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| IMP05_RS24220 () | 38372..38806 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| IMP05_RS24225 () | 38857..39627 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| IMP05_RS24230 () | 40168..40470 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| IMP05_RS24235 () | 40517..40939 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| IMP05_RS24240 () | 40936..41127 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| IMP05_RS24245 () | 41460..41528 | - | 69 | Protein_54 | pilus protein | - |
| IMP05_RS24250 () | 41575..41776 | - | 202 | Protein_55 | hypothetical protein | - |
| IMP05_RS24255 () | 41897..42424 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| IMP05_RS24260 () | 42482..42715 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| IMP05_RS24265 () | 42774..44732 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| IMP05_RS24270 () | 44787..45221 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| IMP05_RS24275 () | 45218..45937 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| IMP05_RS24280 () | 45934..46530 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| IMP05_RS24285 () | 46993..47493 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| IMP05_RS24290 () | 48222..48656 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| IMP05_RS24295 () | 48748..49014 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| IMP05_RS24300 () | 49079..50020 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| IMP05_RS24305 () | 50082..50252 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| IMP05_RS24310 () | 50283..50534 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| IMP05_RS24315 () | 50568..50765 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| IMP05_RS24320 () | 51114..51962 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| IMP05_RS24325 () | 52047..52382 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| IMP05_RS24330 () | 52616..52948 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| IMP05_RS24335 () | 52959..55658 | + | 2700 | WP_024143648.1 | Protein TraI | Relaxase |
| IMP05_RS24340 () | 55695..57986 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| IMP05_RS24345 () | 57979..59049 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| IMP05_RS24350 () | 59068..60276 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 60456..60513 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60456..60513 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60456..60513 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60456..60513 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| IMP05_RS24355 () | 60568..60720 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| IMP05_RS24360 () | 60792..61043 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| IMP05_RS24365 () | 61702..61878 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| IMP05_RS24370 () | 62270..62479 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| IMP05_RS24375 () | 62551..63201 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IMP05_RS24380 () | 63275..65443 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| IMP05_RS24385 () | 65540..66124 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| IMP05_RS24390 () | 66153..67355 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| IMP05_RS24395 () | 67322..67936 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| IMP05_RS24400 () | 67936..70980 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| IMP05_RS24405 () | 71070..71870 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| IMP05_RS24410 () | 71854..72042 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| IMP05_RS24415 () | 72106..72510 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| IMP05_RS24420 () | 72561..73088 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| IMP05_RS24425 () | 73088..73792 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| IMP05_RS24430 () | 73792..75081 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| IMP05_RS24435 () | 75084..76067 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| IMP05_RS24440 () | 76078..76770 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| IMP05_RS24445 () | 76767..77114 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| IMP05_RS24450 () | 77132..80899 | - | 3768 | WP_001141527.1 | DNA primase | - |
| IMP05_RS24455 () | 80988..81539 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| IMP05_RS24460 () | 81554..81844 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| IMP05_RS24465 () | 81841..82989 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| IMP05_RS24470 () | 82986..83804 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| IMP05_RS24475 () | 83801..84259 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| IMP05_RS24480 () | 84654..85238 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| IMP05_RS24485 () | 85298..86500 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| IMP05_RS24490 () | 86585..87409 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| IMP05_RS24495 () | 87560..88714 | - | 1155 | WP_001139957.1 | integrase | - |
| IMP05_RS24500 () | 89508..89723 | + | 216 | Protein_105 | IS1380 family transposase ISEcp1 | Transposase |
| IMP05_RS24505 () | 89740..90437 | - | 698 | Protein_106 | IS1 family transposase IS1R | Transposase |
| IMP05_RS24510 () | 90642..91604 | + | 963 | WP_195686648.1 | IS5 family transposase ISKpn26 | Transposase |
| IMP05_RS24515 () | 91983..92858 | + | 876 | WP_013188473.1 | Beta-lactamase CTX-M-1 | ARG |
| IMP05_RS24520 () | 92905..93237 | - | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| IMP05_RS24525 () | 93758..93960 | + | 203 | Protein_110 | prepilin | - |
| IMP05_RS24530 () | 93957..95381 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| IMP05_RS24535 () | 95381..96037 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| IMP05_RS24540 () | 96022..96582 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| IMP05_RS24545 () | 96592..97206 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| IMP05_RS24550 () | 97224..98321 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IMP05_RS24555 () | 98334..99887 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IMP05_RS24560 () | 99898..100350 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| IMP05_RS24565 () | 100337..101632 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| IMP05_RS24570 () | 101625..103307 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| IMP05_RS24575 () | 103321..103758 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| IMP05_RS24580 () | 103758..104825 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| IMP05_RS24585 () | 105449..105745 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| IMP05_RS24590 () | 105921..106175 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| IMP05_RS24595 () | 106337..106888 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| IMP05_RS24600 () | 107061..107744 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| IMP05_RS24605 () | 107998..108531 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| IMP05_RS24610 () | 108973..109260 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| IMP05_RS24615 () | 109178..109441 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.007 |