MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP062900 Location: 98704..99684 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: plasmid unnamednovel_0
Accession: NZ_CP062900 Location: 98704..99684 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: plasmid unnamednovel_0
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP38_RS24570 () | 94523..94750 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| IMP38_RS24575 () | 94750..95148 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IMP38_RS24580 () | 95157..97310 | - | 2154 | WP_195686652.1 | type IV conjugative transfer system coupling protein TraD | - |
| IMP38_RS24585 () | 97562..98293 | - | 732 | WP_000850430.1 | complement resistance protein TraT | - |
| IMP38_RS24590 () | 98325..98635 | - | 311 | Protein_106 | entry exclusion protein | - |
| IMP38_RS24595 () | 98668..99684 | + | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| IMP38_RS24600 () | 99832..100014 | - | 183 | Protein_108 | entry exclusion protein | - |
| IMP38_RS24605 () | 100049..102856 | - | 2808 | WP_112046784.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IMP38_RS24610 () | 102853..104226 | - | 1374 | WP_000944319.1 | conjugal transfer protein TraH | - |
| IMP38_RS24615 () | 104213..104638 | - | 426 | WP_097423371.1 | F-type conjugal transfer protein TrbF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |