MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP062895 Location: 2310505..2311485 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: chromosome
Accession: NZ_CP062895 Location: 2310505..2311485 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP38_RS11145 () | 2305852..2306157 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| IMP38_RS11150 () | 2306182..2306421 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IMP38_RS11155 () | 2306421..2306708 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IMP38_RS11160 () | 2306780..2306935 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IMP38_RS11165 () | 2307152..2307403 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| IMP38_RS11170 () | 2307470..2307748 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| IMP38_RS11175 () | 2307750..2308799 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| IMP38_RS11180 () | 2308813..2309565 | + | 753 | WP_001047135.1 | antitermination protein | - |
| IMP38_RS11185 () | 2309843..2309932 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| IMP38_RS11190 () | 2309987..2310199 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IMP38_RS11195 () | 2310469..2311485 | + | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| IMP38_RS11200 () | 2311699..2311914 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IMP38_RS11205 () | 2312668..2312883 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IMP38_RS11210 () | 2312888..2313199 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| IMP38_RS11215 () | 2313196..2313729 | + | 534 | WP_001092971.1 | lysozyme | - |
| IMP38_RS11220 () | 2313726..2314223 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IMP38_RS11225 () | 2314587..2314799 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IMP38_RS11230 () | 2314810..2314998 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| IMP38_RS11235 () | 2315001..2315066 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| IMP38_RS11240 () | 2315146..2315301 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| IMP38_RS11245 () | 2315473..2315646 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IMP38_RS11250 () | 2315798..2316208 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |