MGE detailed information
MGE type: Conjugative plasmid MGE length: 162467 bp
Accession: NZ_CP062870 Location: 1..162467 Organism: Escherichia coli strain Res13-Lact-PEB01-20 Replicon: plasmid unnamed973
Accession: NZ_CP062870 Location: 1..162467 Organism: Escherichia coli strain Res13-Lact-PEB01-20 Replicon: plasmid unnamed973
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP84_RS22995 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| IMP84_RS23000 () | 1263..2003 | - | 741 | WP_195707260.1 | tyrosine-type recombinase/integrase | - |
| IMP84_RS23005 () | 2124..2312 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| IMP84_RS23010 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| IMP84_RS23015 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| IMP84_RS23020 () | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| IMP84_RS23025 () | 7425..7583 | - | 159 | WP_001324039.1 | integrase core domain-containing protein | - |
| IMP84_RS23030 () | 7767..8966 | + | 1200 | Protein_7 | IS3 family transposase IS629 | Transposase |
| IMP84_RS23035 () | 9114..9439 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| IMP84_RS23040 () | 10420..11607 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| IMP84_RS23045 () | 11604..13544 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| IMP84_RS23050 () | 13548..14918 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| IMP84_RS23055 () | 15392..15586 | + | 195 | Protein_12 | IS200/IS605 family transposase | - |
| IMP84_RS23060 () | 15715..16656 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| IMP84_RS23065 () | 16891..18280 | - | 1390 | Protein_14 | ISNCY family transposase ISKpn21 | Transposase |
| IMP84_RS23070 () | 18590..18739 | - | 150 | Protein_15 | IS3 family transposase IS2 | Transposase |
| IMP84_RS23075 () | 18917..20110 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| IMP84_RS23080 () | 21352..22080 | - | 729 | Protein_17 | IS3 family transposase IS2 | Transposase |
| IMP84_RS23085 () | 22142..23304 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| IMP84_RS23090 () | 23321..23886 | - | 566 | Protein_19 | IS3 family transposase IS2 | Transposase |
| IMP84_RS23095 () | 24466..24759 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| IMP84_RS23100 () | 24817..24992 | - | 176 | Protein_21 | lysis protein | - |
| IMP84_RS23105 () | 25570..26669 | + | 1100 | Protein_22 | IS481 family transposase ISKpn28 | Transposase |
| IMP84_RS23110 () | 27905..29020 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| IMP84_RS23115 () | 29160..32819 | + | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
| IMP84_RS23120 () | 32923..34152 | + | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
| IMP84_RS23125 () | 34237..35193 | + | 957 | WP_000271274.1 | Ferri-bacillibactin esterase BesA | VF |
| IMP84_RS23130 () | 35238..37415 | - | 2178 | WP_001222185.1 | Ferric enterobactin receptor | VF |
| IMP84_RS23135 () | 38281..39315 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| IMP84_RS23140 () | 39875..40183 | - | 309 | WP_000377483.1 | hypothetical protein | - |
| IMP84_RS23145 () | 40282..40464 | - | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP84_RS23150 () | 40461..40658 | - | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| IMP84_RS23155 () | 41340..42614 | + | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
| IMP84_RS23160 () | 42589..44703 | + | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| IMP84_RS23165 () | 44873..45184 | - | 312 | WP_001259758.1 | colicin V | - |
| IMP84_RS23170 () | 45162..45398 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| IMP84_RS23175 () | 45559..46336 | + | 778 | Protein_36 | Gfo/Idh/MocA family oxidoreductase | - |
| IMP84_RS23180 () | 46338..46607 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| IMP84_RS23185 () | 46604..47584 | + | 981 | WP_001017346.1 | NAD(P)-binding domain-containing protein | - |
| IMP84_RS23190 () | 47639..48040 | + | 402 | WP_001309176.1 | IS66 family transposase ISEc8 | Transposase |
| IMP84_RS23195 () | 48037..48384 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| IMP84_RS23200 () | 48434..49863 | + | 1430 | Protein_41 | IS66 family transposase ISEc8 | Transposase |
| IMP84_RS23205 () | 49895..51508 | - | 1614 | WP_001366169.1 | IS66 family transposase ISEc23 | Transposase |
| IMP84_RS23210 () | 51539..51889 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| IMP84_RS23215 () | 51886..52311 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| IMP84_RS23220 () | 52365..52511 | + | 147 | WP_195707261.1 | transposase domain-containing protein | - |
| IMP84_RS23225 () | 52551..52817 | + | 267 | Protein_46 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IMP84_RS23230 () | 52804..53256 | - | 453 | WP_001553770.1 | peptide deformylase | - |
| IMP84_RS23235 () | 53365..57498 | - | 4134 | WP_001080137.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| IMP84_RS23240 () | 57689..58043 | - | 355 | Protein_49 | helix-turn-helix transcriptional regulator | - |
| IMP84_RS23245 () | 58139..58396 | + | 258 | Protein_50 | IS3 family transposase IS911 | Transposase |
| IMP84_RS23250 () | 58464..59615 | + | 1152 | WP_001442799.1 | IS30 family transposase IS30D | Transposase |
| IMP84_RS23255 () | 59737..60102 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| IMP84_RS23260 () | 60102..61217 | + | 1116 | Protein_53 | IS91 family transposase IS91 | Transposase |
| IMP84_RS23265 () | 61398..61742 | - | 345 | WP_001553768.1 | hypothetical protein | - |
| IMP84_RS23270 () | 62600..65566 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IMP84_RS23275 () | 65570..66130 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IMP84_RS23280 () | 66440..68017 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| IMP84_RS23285 () | 68294..69154 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IMP84_RS23290 () | 69337..69894 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IMP84_RS23295 () | 70058..73063 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IMP84_RS23300 () | 72996..73461 | - | 466 | Protein_61 | incFII family plasmid replication initiator RepA | - |
| IMP84_RS23305 () | 73454..73936 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| IMP84_RS23310 () | 73929..74003 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| IMP84_RS23315 () | 74235..74492 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| IMP84_RS23320 () | 74776..74982 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 74969..75030 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 74969..75030 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 74969..75030 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 74969..75030 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| IMP84_RS23325 () | 75286..75360 | - | 75 | Protein_66 | endonuclease | - |
| IMP84_RS23330 () | 75606..75818 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| IMP84_RS23335 () | 75954..76514 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| IMP84_RS23340 () | 76617..77477 | - | 861 | WP_000704513.1 | putative protein YcjY | VF |
| IMP84_RS23345 () | 77536..78282 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| IMP84_RS23350 () | 78302..83572 | - | 5271 | WP_000986963.1 | Multifunctional conjugation protein TraI | Relaxase |
| IMP84_RS23355 () | 83654..83881 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| IMP84_RS23360 () | 83881..84279 | + | 399 | WP_000911313.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IMP84_RS23365 () | 84288..86441 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| IMP84_RS23370 () | 86694..87425 | - | 732 | WP_023565183.1 | complement resistance protein TraT | - |
| IMP84_RS23375 () | 87457..87954 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| IMP84_RS23380 () | 87970..90792 | - | 2823 | WP_001007018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IMP84_RS23385 () | 90789..92162 | - | 1374 | WP_001517790.1 | conjugal transfer protein TraH | - |
| IMP84_RS23390 () | 92162..92575 | - | 414 | WP_001324104.1 | F-type conjugal transfer protein TrbF | - |
| IMP84_RS23395 () | 92529..92870 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| IMP84_RS23400 () | 92800..93345 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IMP84_RS23405 () | 93332..93616 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IMP84_RS23410 () | 93697..94011 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| IMP84_RS23415 () | 94013..94360 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| IMP84_RS23420 () | 94376..95119 | - | 744 | WP_001030377.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IMP84_RS23425 () | 95112..95369 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| IMP84_RS23430 () | 95396..97204 | - | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IMP84_RS23435 () | 97201..97839 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IMP84_RS23440 () | 97848..98840 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| IMP84_RS23445 () | 98837..99469 | - | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
| IMP84_RS23450 () | 99466..99852 | - | 387 | WP_000099691.1 | type-F conjugative transfer system protein TrbI | - |
| IMP84_RS23455 () | 99849..102476 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| IMP84_RS23460 () | 102636..102857 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| IMP84_RS23465 () | 102992..103507 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IMP84_RS23470 () | 103504..103755 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| IMP84_RS23475 () | 103767..103997 | - | 231 | WP_001442573.1 | conjugal transfer protein TrbD | - |
| IMP84_RS23480 () | 103951..104541 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| IMP84_RS23485 () | 104531..105958 | - | 1428 | WP_000146676.1 | conjugal transfer protein TraB | - |
| IMP84_RS23490 () | 105958..106662 | - | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| IMP84_RS23495 () | 106673..107239 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| IMP84_RS23500 () | 107261..107572 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IMP84_RS23505 () | 107587..107952 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| IMP84_RS23510 () | 107995..108210 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| IMP84_RS23515 () | 108346..108993 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| IMP84_RS23520 () | 109185..109568 | - | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| IMP84_RS23525 () | 109920..110510 | + | 591 | WP_166494936.1 | hypothetical protein | VF |
| IMP84_RS23530 () | 110805..111626 | - | 822 | WP_001234475.1 | DUF945 domain-containing protein | - |
| IMP84_RS23535 () | 111745..112032 | - | 288 | WP_000107546.1 | hypothetical protein | - |
| IMP84_RS23540 () | 112057..112263 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| IMP84_RS23545 () | 112333..112692 | + | 360 | Protein_110 | hypothetical protein | - |
| IMP84_RS23550 () | 112930..113088 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 113153..113351 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 113153..113351 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 113153..113351 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 113153..113351 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| IMP84_RS23555 () | 113363..114082 | - | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| IMP84_RS23560 () | 114079..114513 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| IMP84_RS23565 () | 114568..115149 | - | 582 | Protein_114 | hypothetical protein | - |
| IMP84_RS23570 () | 115259..116467 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| IMP84_RS23575 () | 116482..117864 | - | 1383 | Protein_116 | ParB/RepB/Spo0J family partition protein | - |
| IMP84_RS23580 () | 117930..118163 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| IMP84_RS23585 () | 118220..118759 | - | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| IMP84_RS23590 () | 119077..119586 | + | 510 | WP_071600123.1 | hypothetical protein | - |
| IMP84_RS23595 () | 119556..119747 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| IMP84_RS23600 () | 119744..120166 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| IMP84_RS23605 () | 120213..120515 | - | 303 | WP_072148062.1 | antirestriction protein | - |
| IMP84_RS23610 () | 121051..121827 | - | 777 | WP_001005035.1 | hypothetical protein | - |
| IMP84_RS23615 () | 121873..122427 | - | 555 | WP_077248347.1 | DUF1380 family protein | - |
| IMP84_RS23620 () | 122321..122542 | - | 222 | WP_001104870.1 | hypothetical protein | - |
| IMP84_RS23625 () | 122543..123226 | - | 684 | WP_000085939.1 | DNA methylase | - |
| IMP84_RS23630 () | 123303..123608 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| IMP84_RS23635 () | 123612..124513 | - | 902 | Protein_128 | DUF1281 domain-containing protein | - |
| IMP84_RS23640 () | 125423..126394 | - | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IMP84_RS23645 () | 126394..127560 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| IMP84_RS23650 () | 128148..128903 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| IMP84_RS23655 () | 129655..130461 | - | 807 | WP_195707259.1 | site-specific integrase | - |
| IMP84_RS23660 () | 130462..130767 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IMP84_RS23665 () | 130769..130987 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IMP84_RS23670 () | 131555..132067 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| IMP84_RS23675 () | 132101..133234 | - | 1134 | WP_000545984.1 | DUF3800 domain-containing protein | - |
| IMP84_RS23680 () | 133401..134174 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| IMP84_RS23685 () | 134187..134687 | - | 501 | WP_000528932.1 | hypothetical protein | - |
| IMP84_RS23690 () | 134952..135182 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IMP84_RS23695 () | 135179..135595 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IMP84_RS23700 () | 135640..139434 | - | 3795 | WP_001144731.1 | hypothetical protein | - |
| IMP84_RS23705 () | 139815..140045 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IMP84_RS23710 () | 140042..140458 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IMP84_RS23715 () | 140533..142098 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| IMP84_RS23720 () | 142083..143105 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| IMP84_RS23725 () | 143359..144056 | - | 698 | Protein_146 | IS1 family transposase IS1S | Transposase |
| IMP84_RS23730 () | 144436..146637 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| IMP84_RS23735 () | 146719..147996 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| IMP84_RS23740 () | 147993..149735 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| IMP84_RS23745 () | 149735..150682 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| IMP84_RS23750 () | 150683..152407 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| IMP84_RS23755 () | 152543..153736 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| IMP84_RS23760 () | 154022..154719 | - | 698 | Protein_153 | IS1 family transposase IS1G | Transposase |
| IMP84_RS23765 () | 155135..155548 | - | 414 | Protein_154 | phosphopyruvate hydratase | - |
| IMP84_RS23770 () | 156037..156894 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| IMP84_RS23775 () | 156891..157748 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| IMP84_RS23780 () | 157745..158572 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| IMP84_RS23785 () | 158572..159486 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| IMP84_RS23790 () | 159842..160539 | + | 698 | Protein_159 | IS1 family transposase IS1S | Transposase |
| IMP84_RS23795 () | 160719..161232 | - | 514 | Protein_160 | DUF4113 domain-containing protein | - |
| IMP84_RS23800 () | 161293..161397 | - | 105 | Protein_161 | AAA family ATPase | - |
| IMP84_RS23805 () | 161399..161722 | - | 324 | Protein_162 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|