MGE detailed information
MGE type: Conjugative plasmid MGE length: 112549 bp
Accession: NZ_CP062869 Location: 1..112549 Organism: Escherichia coli strain Res13-Lact-PEB01-20 Replicon: plasmid unnamed476
Accession: NZ_CP062869 Location: 1..112549 Organism: Escherichia coli strain Res13-Lact-PEB01-20 Replicon: plasmid unnamed476
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP84_RS22340 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| IMP84_RS22345 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| IMP84_RS22350 () | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| IMP84_RS22355 () | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMP84_RS22360 () | 3638..6052 | - | 2415 | Protein_4 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IMP84_RS22365 () | 6056..6616 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IMP84_RS22370 () | 6792..7142 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| IMP84_RS22375 () | 7345..8358 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| IMP84_RS22380 () | 8516..8989 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| IMP84_RS22385 () | 9120..9908 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| IMP84_RS22390 () | 10110..10814 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IMP84_RS22395 () | 10867..11622 | + | 756 | Protein_11 | IS110 family transposase IS5075 | Transposase |
| IMP84_RS22400 () | 11804..11980 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| IMP84_RS22405 () | 12310..13125 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| IMP84_RS22410 () | 13212..13454 | + | 243 | Protein_14 | phosphoglucosamine mutase | - |
| IMP84_RS22415 () | 13408..13659 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| IMP84_RS22420 () | 13690..14826 | - | 1137 | WP_023140202.1 | IS91 family transposase ISVsa3 | Transposase |
| IMP84_RS22425 () | 15193..15462 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IMP84_RS22430 () | 15459..15740 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP84_RS22435 () | 15780..16628 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| IMP84_RS22440 () | 16745..17218 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| IMP84_RS22445 () | 17695..17961 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| IMP84_RS22450 () | 17961..18455 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| IMP84_RS22455 () | 18511..19113 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| IMP84_RS22460 () | 19467..20813 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| IMP84_RS22465 () | 20957..21654 | - | 698 | Protein_25 | IS1 family transposase IS1G | Transposase |
| IMP84_RS22470 () | 22121..23395 | + | 1275 | WP_001459502.1 | colicin-Ia | - |
| IMP84_RS22475 () | 23413..23760 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| IMP84_RS22480 () | 23879..24227 | + | 349 | Protein_28 | hypothetical protein | - |
| IMP84_RS22485 () | 24247..24837 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| IMP84_RS22490 () | 24837..25094 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| IMP84_RS22495 () | 25445..26446 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| IMP84_RS22500 () | 26622..26966 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| IMP84_RS22505 () | 27465..27719 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| IMP84_RS22510 () | 27764..28690 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| IMP84_RS22515 () | 29222..29635 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| IMP84_RS22520 () | 29637..30416 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| IMP84_RS22525 () | 30596..31240 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IMP84_RS22530 () | 31327..31635 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IMP84_RS22535 () | 32049..33029 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| IMP84_RS22540 () | 33022..33438 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| IMP84_RS22545 () | 33440..34714 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| IMP84_RS22550 () | 34714..35151 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMP84_RS22555 () | 35148..35396 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| IMP84_RS22560 () | 35814..36716 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| IMP84_RS22565 () | 36713..37024 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| IMP84_RS22570 () | 37101..37784 | + | 684 | WP_000086178.1 | DNA methylase | - |
| IMP84_RS22575 () | 37785..38006 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| IMP84_RS22580 () | 38018..38452 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| IMP84_RS22585 () | 38503..39273 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| IMP84_RS22590 () | 39814..40116 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| IMP84_RS22595 () | 40163..40585 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| IMP84_RS22600 () | 40582..40773 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| IMP84_RS22605 () | 41106..41174 | - | 69 | Protein_53 | pilus protein | - |
| IMP84_RS22610 () | 41543..42070 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| IMP84_RS22615 () | 42128..42361 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| IMP84_RS22620 () | 42420..44378 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| IMP84_RS22625 () | 44433..44867 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| IMP84_RS22630 () | 44864..45583 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| IMP84_RS22635 () | 45580..46176 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| IMP84_RS22640 () | 46639..47139 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| IMP84_RS22645 () | 47868..48302 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| IMP84_RS22650 () | 48394..48660 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| IMP84_RS22655 () | 48725..49666 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| IMP84_RS22660 () | 49728..49898 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| IMP84_RS22665 () | 49929..50180 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| IMP84_RS22670 () | 50214..50411 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| IMP84_RS22675 () | 50760..51608 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| IMP84_RS22680 () | 51693..52028 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| IMP84_RS22685 () | 52262..52594 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| IMP84_RS22690 () | 52605..55304 | + | 2700 | WP_024143648.1 | Protein TraI | Relaxase |
| IMP84_RS22695 () | 55341..57632 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| IMP84_RS22700 () | 57625..58695 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| IMP84_RS22705 () | 58714..59922 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 60102..60159 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60102..60159 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60102..60159 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60102..60159 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| IMP84_RS22710 () | 60214..60366 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| IMP84_RS22715 () | 60438..60689 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| IMP84_RS22720 () | 61348..61524 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| IMP84_RS22725 () | 61916..62125 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| IMP84_RS22730 () | 62197..62847 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IMP84_RS22735 () | 62921..65089 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| IMP84_RS22740 () | 65186..65770 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| IMP84_RS22745 () | 65799..67001 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| IMP84_RS22750 () | 66968..67582 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| IMP84_RS22755 () | 67582..70626 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| IMP84_RS22760 () | 70716..71516 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| IMP84_RS22765 () | 71500..71688 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| IMP84_RS22770 () | 71752..72156 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| IMP84_RS22775 () | 72207..72734 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| IMP84_RS22780 () | 72734..73438 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| IMP84_RS22785 () | 73438..74727 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| IMP84_RS22790 () | 74730..75713 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| IMP84_RS22795 () | 75724..76416 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| IMP84_RS22800 () | 76413..76760 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| IMP84_RS22805 () | 76778..78373 | - | 1596 | Protein_93 | DNA primase | - |
| IMP84_RS22810 () | 78404..80017 | - | 1614 | WP_001366169.1 | IS66 family transposase ISEc23 | Transposase |
| IMP84_RS22815 () | 80048..80398 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| IMP84_RS22820 () | 80395..80820 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| IMP84_RS22825 () | 80908..83085 | - | 2178 | Protein_97 | DNA primase | - |
| IMP84_RS22830 () | 83174..83725 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| IMP84_RS22835 () | 83740..84030 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| IMP84_RS22840 () | 84027..85175 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| IMP84_RS22845 () | 85172..85990 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| IMP84_RS22850 () | 85987..86445 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| IMP84_RS22855 () | 86840..87424 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| IMP84_RS22860 () | 87484..88686 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| IMP84_RS22865 () | 88771..89595 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| IMP84_RS22870 () | 89746..90900 | - | 1155 | WP_001139957.1 | integrase | - |
| IMP84_RS22875 () | 91439..91771 | + | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| IMP84_RS22880 () | 91818..92693 | - | 876 | WP_013188473.1 | Beta-lactamase CTX-M-1 | ARG |
| IMP84_RS22885 () | 93072..94034 | - | 963 | WP_195686648.1 | IS5 family transposase ISKpn26 | Transposase |
| IMP84_RS22890 () | 94239..94936 | + | 698 | Protein_110 | IS1 family transposase | - |
| IMP84_RS22895 () | 94953..95168 | - | 216 | Protein_111 | IS1380 family transposase ISEcp1 | Transposase |
| IMP84_RS22900 () | 96025..96273 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| IMP84_RS22905 () | 96270..97562 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| IMP84_RS22910 () | 97562..98218 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| IMP84_RS22915 () | 98203..98763 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| IMP84_RS22920 () | 98773..99387 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| IMP84_RS22925 () | 99405..100502 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IMP84_RS22930 () | 100515..102068 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IMP84_RS22935 () | 102079..102531 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| IMP84_RS22940 () | 102518..103813 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| IMP84_RS22945 () | 103806..105488 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| IMP84_RS22950 () | 105502..105939 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| IMP84_RS22955 () | 105939..107006 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| IMP84_RS22960 () | 107630..107926 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| IMP84_RS22965 () | 108102..108356 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| IMP84_RS22970 () | 108518..109069 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| IMP84_RS22975 () | 109242..109925 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| IMP84_RS22980 () | 110179..110712 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| IMP84_RS22985 () | 111154..111441 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| IMP84_RS22990 () | 111359..111622 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.008 |