MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 141255 bp
Accession: NZ_CP062837 Location: 1..141255 Organism: Escherichia coli strain Res13-Lact-PER04-33 Replicon: plasmid unnamednovel_0
Accession: NZ_CP062837 Location: 1..141255 Organism: Escherichia coli strain Res13-Lact-PER04-33 Replicon: plasmid unnamednovel_0
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ22_RS24055 () | 1301..2041 | - | 741 | WP_096837748.1 | tyrosine-type recombinase/integrase | - |
| IMQ22_RS24060 () | 2376..2726 | + | 351 | WP_032339070.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| IMQ22_RS24065 () | 2964..3839 | + | 876 | WP_050593755.1 | CDF family zinc transporter ZitB | - |
| IMQ22_RS24070 () | 4338..4553 | + | 216 | WP_029488778.1 | hypothetical protein | - |
| IMQ22_RS24075 () | 4648..4923 | - | 276 | WP_029488779.1 | hypothetical protein | - |
| IMQ22_RS24085 () | 6156..6416 | + | 261 | WP_042099237.1 | Major pilu subunit operon regulatory protein PapB | VF |
| IMQ22_RS24090 () | 6573..6944 | + | 372 | WP_029488780.1 | hypothetical protein | VF |
| IMQ22_RS24095 () | 6983..7627 | + | 645 | WP_029488781.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IMQ22_RS24100 () | 7985..8245 | + | 261 | WP_143362514.1 | hypothetical protein | - |
| IMQ22_RS24105 () | 8290..8490 | - | 201 | Protein_10 | transposase | - |
| IMQ22_RS24110 () | 8797..9959 | + | 1163 | WP_112046989.1 | IS3 family transposase ISEc17 | Transposase |
| IMQ22_RS24115 () | 10824..11135 | + | 312 | WP_195686662.1 | Major pilu subunit operon regulatory protein PapB | VF |
| IMQ22_RS24120 () | 11208..11951 | + | 744 | WP_050593764.1 | Chaperone protein caf1M | VF |
| IMQ22_RS24125 () | 11971..14421 | + | 2451 | WP_029488855.1 | F1 capsule-anchoring protein | VF |
| IMQ22_RS24130 () | 14491..15021 | + | 531 | WP_029488854.1 | hypothetical protein | - |
| IMQ22_RS24135 () | 15309..15485 | + | 177 | WP_112046938.1 | ESPR domain-containing protein | - |
| IMQ22_RS24140 () | 15546..15794 | + | 249 | Protein_17 | IS3 family transposase ISEhe3 | Transposase |
| IMQ22_RS24145 () | 15804..16700 | - | 897 | Protein_18 | IS30 family transposase IS30D | Transposase |
| IMQ22_RS24150 () | 16792..18021 | + | 1230 | Protein_19 | IS3 family transposase | - |
| IMQ22_RS24155 () | 18032..18292 | - | 261 | Protein_20 | IS30 family transposase IS30D | Transposase |
| IMQ22_RS24160 () | 18360..18617 | - | 258 | Protein_21 | IS3 family transposase IS911 | Transposase |
| IMQ22_RS24165 () | 18723..19094 | - | 372 | Protein_22 | IS3 family transposase IS911 | Transposase |
| IMQ22_RS24170 () | 19157..19510 | + | 354 | WP_162778042.1 | hypothetical protein | - |
| IMQ22_RS24175 () | 19563..20330 | - | 768 | WP_001711193.1 | hypothetical protein | - |
| IMQ22_RS24180 () | 20774..21935 | + | 1162 | Protein_25 | IS3 family transposase ISEc17 | Transposase |
| IMQ22_RS24185 () | 22546..22848 | - | 303 | WP_029488886.1 | Major pilu subunit operon regulatory protein PapB | VF |
| IMQ22_RS24190 () | 23368..24111 | - | 744 | Protein_27 | IS3 family transposase ISEhe3 | Transposase |
| IMQ22_RS24195 () | 24175..25326 | + | 1152 | Protein_28 | IS30 family transposase IS30D | Transposase |
| IMQ22_RS24200 () | 25384..25694 | - | 311 | Protein_29 | IS630 family transposase ISEc33 | Transposase |
| IMQ22_RS24205 () | 26056..26733 | + | 678 | WP_029488819.1 | hypothetical protein | - |
| IMQ22_RS24210 () | 26957..27235 | + | 279 | Protein_31 | IS3 family transposase ISEc17 | Transposase |
| IMQ22_RS24215 () | 27332..28442 | + | 1111 | WP_114138044.1 | IS3 family transposase IS1351 | Transposase |
| IMQ22_RS24220 () | 28429..28776 | + | 348 | Protein_33 | conjugation system SOS inhibitor PsiB | - |
| IMQ22_RS24225 () | 28766..29276 | + | 511 | Protein_34 | plasmid SOS inhibition protein A | - |
| IMQ22_RS24230 () | 29421..29902 | - | 482 | Protein_35 | IS630 family transposase IS630 | Transposase |
| IMQ22_RS24235 () | 30160..30915 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| IMQ22_RS24240 () | 30932..32467 | - | 1536 | WP_029488823.1 | IS21 family transposase ISSso4 | Transposase |
| IMQ22_RS24245 () | 33086..34423 | + | 1338 | WP_029488891.1 | IS4 family transposase ISCro3 | Transposase |
| IMQ22_RS24250 () | 34849..35325 | + | 477 | WP_029488813.1 | hypothetical protein | VF |
| IMQ22_RS24255 () | 35328..36806 | + | 1479 | WP_029488812.1 | hypothetical protein | VF |
| IMQ22_RS24260 () | 36828..37313 | + | 486 | WP_029488811.1 | hypothetical protein | - |
| IMQ22_RS24265 () | 37349..37762 | + | 414 | WP_029488810.1 | hypothetical protein | - |
| IMQ22_RS24270 () | 37755..39542 | + | 1788 | WP_029488809.1 | type VI secretion system baseplate subunit TssF | - |
| IMQ22_RS24275 () | 39533..40462 | + | 930 | WP_029488808.1 | type VI secretion system baseplate subunit TssG | - |
| IMQ22_RS24280 () | 40473..42404 | + | 1932 | WP_029488807.1 | type VI secretion system tip protein VgrG | - |
| IMQ22_RS24285 () | 42397..42858 | + | 462 | WP_077696971.1 | hypothetical protein | - |
| IMQ22_RS24290 () | 42868..43167 | + | 300 | WP_170867412.1 | PAAR domain-containing protein | - |
| IMQ22_RS24295 () | 43171..44235 | + | 1065 | WP_029488805.1 | type VI secretion system protein TssA | - |
| IMQ22_RS24300 () | 44452..44700 | + | 249 | Protein_49 | IS3 family transposase ISEhe3 | Transposase |
| IMQ22_RS24305 () | 44765..45916 | + | 1152 | WP_195686650.1 | IS30 family transposase IS30D | Transposase |
| IMQ22_RS24310 () | 45924..46625 | + | 702 | Protein_51 | IS3 family transposase ISEhe3 | Transposase |
| IMQ22_RS24315 () | 46758..47375 | - | 618 | Protein_52 | IS1 family transposase | - |
| IMQ22_RS24320 () | 48352..48924 | + | 573 | WP_029488786.1 | type VI secretion lipoprotein TssJ | - |
| IMQ22_RS24325 () | 48902..50338 | + | 1437 | WP_050593757.1 | type VI secretion system baseplate subunit TssK | - |
| IMQ22_RS24330 () | 50373..50963 | + | 591 | WP_029488788.1 | hypothetical protein | VF |
| IMQ22_RS24335 () | 51034..54381 | + | 3348 | WP_029488789.1 | hypothetical protein | - |
| IMQ22_RS24340 () | 54391..56922 | + | 2532 | WP_029488790.1 | Protein ClpV1 | VF |
| IMQ22_RS24345 () | 56955..58007 | + | 1053 | WP_148723451.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| IMQ22_RS24350 () | 58483..59052 | + | 570 | WP_063104712.1 | hypothetical protein | VF |
| IMQ22_RS24355 () | 59242..59379 | + | 138 | Protein_60 | IS630 family transposase | - |
| IMQ22_RS24365 () | 60638..60957 | + | 320 | Protein_62 | IS630 family transposase | - |
| IMQ22_RS24370 () | 60995..61297 | + | 303 | Protein_63 | IS3 family transposase ISEc31 | Transposase |
| IMQ22_RS24375 () | 61365..62045 | + | 681 | Protein_64 | IS30 family transposase IS30D | Transposase |
| IMQ22_RS24380 () | 62419..63339 | + | 921 | WP_029488882.1 | hypothetical protein | - |
| IMQ22_RS24385 () | 63523..63744 | + | 222 | Protein_66 | IS3 family transposase IS2 | Transposase |
| IMQ22_RS24390 () | 63774..65387 | - | 1614 | WP_000080172.1 | IS66 family transposase ISEc43 | Transposase |
| IMQ22_RS24395 () | 65418..65768 | - | 351 | WP_000624688.1 | IS66 family transposase ISEc47 | Transposase |
| IMQ22_RS24400 () | 65765..66199 | - | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| IMQ22_RS24405 () | 66285..67297 | + | 1013 | Protein_70 | IS3 family transposase IS2 | Transposase |
| IMQ22_RS24410 () | 67756..68367 | - | 612 | WP_029488843.1 | hypothetical protein | - |
| IMQ22_RS24415 () | 68756..69133 | - | 378 | Protein_72 | IS3 family transposase ISBmu11 | Transposase |
| IMQ22_RS24420 () | 69504..70313 | - | 810 | WP_029488841.1 | hypothetical protein | - |
| IMQ22_RS24425 () | 70899..71090 | - | 192 | WP_157895655.1 | hypothetical protein | - |
| IMQ22_RS24430 () | 71587..72588 | + | 1002 | WP_029488840.1 | DUF2219 family protein | - |
| IMQ22_RS24435 () | 72663..73568 | - | 906 | Protein_76 | IS3 family transposase ISCfr6 | Transposase |
| IMQ22_RS24440 () | 73578..74729 | - | 1152 | WP_195706479.1 | IS30 family transposase IS30D | Transposase |
| IMQ22_RS24445 () | 74797..75099 | - | 303 | Protein_78 | IS3 family transposase ISEc31 | Transposase |
| IMQ22_RS24450 () | 75135..75332 | - | 198 | Protein_79 | 3'-5' exonuclease | - |
| IMQ22_RS24455 () | 75372..75653 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMQ22_RS24460 () | 75650..75919 | - | 270 | WP_000079923.1 | hypothetical protein | Antitoxin Detail |
| IMQ22_RS24465 () | 76838..77694 | - | 857 | Protein_82 | incFII family plasmid replication initiator RepA | - |
| IMQ22_RS24470 () | 77687..77761 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IMQ22_RS24475 () | 78008..78256 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| IMQ22_RS24480 () | 78540..78746 | - | 207 | WP_032339099.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| IMQ22_RS24485 () | 78969..79352 | - | 384 | Protein_86 | hypothetical protein | - |
| IMQ22_RS24490 () | 79470..79916 | - | 447 | WP_032339098.1 | thermonuclease family protein | - |
| IMQ22_RS24495 () | 80054..81328 | - | 1275 | Protein_88 | IS66 family transposase ISEc23 | Transposase |
| IMQ22_RS24505 () | 82636..82980 | - | 345 | Protein_90 | IS66 family transposase ISEc23 | Transposase |
| IMQ22_RS24510 () | 83011..83361 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| IMQ22_RS24515 () | 83454..84129 | + | 676 | Protein_92 | IS66 family transposase ISCro1 | Transposase |
| IMQ22_RS24520 () | 84182..84475 | + | 294 | WP_001243649.1 | IS66 family transposase ISCro1 | Transposase |
| IMQ22_RS24525 () | 84495..86062 | + | 1568 | Protein_94 | IS66 family transposase | - |
| IMQ22_RS24530 () | 86094..86483 | - | 390 | Protein_95 | IS66 family transposase ISEc23 | Transposase |
| IMQ22_RS24535 () | 87212..87415 | - | 204 | WP_001327131.1 | hypothetical protein | - |
| IMQ22_RS24540 () | 87570..88127 | - | 558 | WP_000139319.1 | fertility inhibition protein FinO | - |
| IMQ22_RS24545 () | 88230..89090 | - | 861 | WP_063115579.1 | putative protein YcjY | VF |
| IMQ22_RS24550 () | 89149..89895 | - | 747 | WP_032285008.1 | conjugal transfer pilus acetylase TraX | - |
| IMQ22_RS24555 () | 89915..94434 | - | 4520 | Protein_100 | Multifunctional conjugation protein TraI | Relaxase |
| IMQ22_RS24560 () | 94516..94743 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| IMQ22_RS24565 () | 94743..95141 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IMQ22_RS24570 () | 95150..97303 | - | 2154 | WP_195686652.1 | type IV conjugative transfer system coupling protein TraD | - |
| IMQ22_RS24575 () | 97555..98286 | - | 732 | WP_000850430.1 | complement resistance protein TraT | - |
| IMQ22_RS24580 () | 98318..98628 | - | 311 | Protein_105 | entry exclusion protein | - |
| IMQ22_RS24585 () | 98661..99677 | + | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| IMQ22_RS24590 () | 99825..100007 | - | 183 | Protein_107 | entry exclusion protein | - |
| IMQ22_RS24595 () | 100042..102849 | - | 2808 | WP_112046784.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IMQ22_RS24600 () | 102846..104219 | - | 1374 | WP_000944319.1 | conjugal transfer protein TraH | - |
| IMQ22_RS24605 () | 104206..104631 | - | 426 | WP_097423371.1 | F-type conjugal transfer protein TrbF | - |
| IMQ22_RS24610 () | 104585..104926 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| IMQ22_RS24615 () | 104856..105401 | - | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IMQ22_RS24620 () | 105388..105672 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IMQ22_RS24625 () | 105753..106067 | + | 315 | WP_000415566.1 | protein ArtA | - |
| IMQ22_RS24630 () | 106069..106416 | - | 348 | WP_195686654.1 | conjugal transfer protein TrbA | - |
| IMQ22_RS24635 () | 106432..107175 | - | 744 | WP_123004360.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IMQ22_RS24640 () | 107168..107425 | - | 258 | WP_123004359.1 | conjugal transfer protein TrbE | - |
| IMQ22_RS24645 () | 107452..108396 | - | 945 | Protein_118 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IMQ22_RS24650 () | 108398..108991 | - | 594 | Protein_119 | plasmid SOS inhibition protein A | - |
| IMQ22_RS24655 () | 108988..109422 | - | 435 | WP_195686656.1 | conjugation system SOS inhibitor PsiB | - |
| IMQ22_RS24660 () | 109477..111436 | - | 1960 | Protein_121 | ParB/RepB/Spo0J family partition protein | - |
| IMQ22_RS24665 () | 111501..111734 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| IMQ22_RS24670 () | 111797..112294 | - | 498 | WP_077874709.1 | single-stranded DNA-binding protein | - |
| IMQ22_RS24675 () | 112444..114345 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| IMQ22_RS24680 () | 115342..115719 | + | 378 | WP_194154724.1 | hypothetical protein | - |
| IMQ22_RS24685 () | 115805..116368 | - | 564 | WP_029488793.1 | class I SAM-dependent methyltransferase | - |
| IMQ22_RS24690 () | 116415..117776 | - | 1362 | WP_029488794.1 | DUF3560 domain-containing protein | - |
| IMQ22_RS24695 () | 117827..118057 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| IMQ22_RS24700 () | 119021..119212 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| IMQ22_RS24705 () | 119209..119631 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| IMQ22_RS24710 () | 119678..119980 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| IMQ22_RS24715 () | 120681..121793 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| IMQ22_RS24720 () | 121870..122646 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| IMQ22_RS24725 () | 122692..123246 | - | 555 | WP_077696970.1 | DUF1380 family protein | - |
| IMQ22_RS24730 () | 123140..123361 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| IMQ22_RS24735 () | 123362..124045 | - | 684 | WP_029488796.1 | DNA methylase | - |
| IMQ22_RS24740 () | 124122..124427 | - | 306 | WP_032339078.1 | hypothetical protein | - |
| IMQ22_RS24745 () | 124431..125333 | - | 903 | WP_001414532.1 | DUF1281 domain-containing protein | - |
| IMQ22_RS24750 () | 126071..127042 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IMQ22_RS24755 () | 127042..128208 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| IMQ22_RS24760 () | 128796..129440 | - | 645 | WP_029488797.1 | replication initiation protein RepE | - |
| IMQ22_RS24765 () | 129468..130373 | - | 906 | Protein_142 | IS3 family transposase ISCfr6 | Transposase |
| IMQ22_RS24770 () | 130438..131589 | + | 1152 | WP_195686658.1 | IS30 family transposase IS30D | Transposase |
| IMQ22_RS24775 () | 131602..131904 | - | 303 | Protein_144 | IS3 family transposase ISEc31 | Transposase |
| IMQ22_RS24780 () | 132157..132963 | - | 807 | WP_097423266.1 | site-specific integrase | - |
| IMQ22_RS24785 () | 132964..133269 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IMQ22_RS24790 () | 133271..133489 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IMQ22_RS24795 () | 134203..136824 | + | 2622 | WP_023063774.1 | ABC transporter | - |
| IMQ22_RS24800 () | 137023..137253 | + | 231 | WP_029488776.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IMQ22_RS24805 () | 137342..137599 | + | 258 | WP_195686660.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IMQ22_RS24810 () | 137755..138963 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| IMQ22_RS24815 () | 138944..139216 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMQ22_RS24820 () | 139335..139552 | - | 218 | Protein_153 | transposase | - |
| IMQ22_RS24825 () | 139553..140083 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | - |
| IMQ22_RS24830 () | 140087..140356 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|