MGE detailed information
MGE type: Conjugative plasmid MGE length: 144932 bp
Accession: NZ_CP062205 Location: 1..144932 Organism: Escherichia coli strain C311 Replicon: plasmid p1
Accession: NZ_CP062205 Location: 1..144932 Organism: Escherichia coli strain C311 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IG172_RS25125 () | 1..978 | + | 978 | WP_192292540.1 | RepB family plasmid replication initiator protein | - |
| IG172_RS25130 () | 1221..1961 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| IG172_RS25135 () | 2082..2283 | - | 202 | Protein_2 | serine/threonine protein kinase | - |
| IG172_RS25140 () | 2349..3435 | + | 1087 | Protein_3 | IS3 family transposase IS3F | Transposase |
| IG172_RS25145 () | 3634..4726 | + | 1093 | Protein_4 | IS3 family transposase | - |
| IG172_RS25150 () | 5078..9658 | + | 4581 | WP_192292543.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| IG172_RS25155 () | 10370..11061 | + | 692 | Protein_6 | hypothetical protein | - |
| IG172_RS25160 () | 11382..11759 | - | 378 | Protein_7 | IS66 family transposase ISCro1 | Transposase |
| IG172_RS25165 () | 11838..12087 | + | 250 | Protein_8 | IS66 family insertion sequence element accessory protein TnpB | - |
| IG172_RS25170 () | 12074..12445 | + | 372 | WP_192292546.1 | IS66 family transposase ISEc49 | Transposase |
| IG172_RS25175 () | 12496..14077 | + | 1582 | Protein_10 | IS66 family transposase ISEc49 | Transposase |
| IG172_RS25180 () | 14091..14234 | - | 144 | WP_163513442.1 | hypothetical protein | - |
| IG172_RS25185 () | 14473..15429 | - | 957 | Protein_12 | IS3 family transposase | - |
| IG172_RS25190 () | 15428..16270 | - | 843 | Protein_13 | IS110 family transposase ISEc21 | Transposase |
| IG172_RS25195 () | 16552..17411 | - | 860 | Protein_14 | IS3 family transposase | - |
| IG172_RS25200 () | 17811..18485 | - | 675 | WP_064734886.1 | hypothetical protein | - |
| IG172_RS25205 () | 18978..21191 | + | 2214 | WP_032215196.1 | Catalase-peroxidase | VF |
| IG172_RS25210 () | 21236..21625 | + | 390 | WP_032215195.1 | cytochrome b562 family protein | - |
| IG172_RS25215 () | 22061..22887 | - | 827 | Protein_18 | IS66 family transposase ISEc23 | Transposase |
| IG172_RS25220 () | 23313..24018 | - | 706 | Protein_19 | hypothetical protein | VF |
| IG172_RS25225 () | 24183..25529 | - | 1347 | WP_077888967.1 | ISNCY family transposase ISLad2 | Transposase |
| IG172_RS25230 () | 27016..27429 | + | 414 | WP_032215190.1 | hypothetical protein | - |
| IG172_RS25235 () | 27436..27996 | + | 561 | WP_192292549.1 | polymer-forming cytoskeletal protein | - |
| IG172_RS25240 () | 28160..28575 | + | 416 | Protein_23 | hypothetical protein | - |
| IG172_RS25245 () | 28686..29746 | + | 1061 | Protein_24 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| IG172_RS25250 () | 29872..30097 | - | 226 | Protein_25 | transposase | - |
| IG172_RS25255 () | 30112..31334 | - | 1223 | Protein_26 | IS3 family transposase | - |
| IG172_RS25260 () | 31586..31690 | - | 105 | Protein_27 | IS3 family transposase IS911 | Transposase |
| IG172_RS25265 () | 31719..31850 | - | 132 | Protein_28 | IS3 family transposase IS911 | Transposase |
| IG172_RS25270 () | 32000..35314 | - | 3315 | WP_192292552.1 | putative autotransporter | VF |
| IG172_RS25275 () | 35326..36501 | - | 1176 | WP_032215046.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| IG172_RS25280 () | 37278..38303 | + | 1026 | Protein_31 | IS3 family transposase | - |
| IG172_RS25285 () | 38352..38509 | - | 158 | Protein_32 | IS256 family transposase | - |
| IG172_RS25290 () | 38861..39115 | - | 255 | WP_032215042.1 | hypothetical protein | - |
| IG172_RS25295 () | 39254..39421 | - | 168 | WP_077756518.1 | PerC family transcriptional regulator | - |
| IG172_RS25300 () | 40726..41460 | - | 735 | WP_032215041.1 | HTH-type transcriptional regulator GadW | VF |
| IG172_RS25305 () | 42389..42770 | - | 382 | Protein_36 | IS110 family transposase | - |
| IG172_RS25310 () | 42805..42951 | - | 147 | Protein_37 | transposase domain-containing protein | - |
| IG172_RS25315 () | 43038..43202 | - | 165 | Protein_38 | IS66 family insertion sequence element accessory protein TnpB | - |
| IG172_RS25320 () | 43289..43963 | + | 675 | WP_032215039.1 | IS66 family transposase ISSfl3 | Transposase |
| IG172_RS25325 () | 43960..44307 | + | 348 | WP_032215038.1 | IS66 family transposase ISSfl3 | Transposase |
| IG172_RS25330 () | 44327..45871 | + | 1545 | WP_105463500.1 | IS66 family transposase ISSfl3 | Transposase |
| IG172_RS25335 () | 45925..46077 | + | 153 | WP_072126895.1 | anaerobic sulfite reductase subunit C | - |
| IG172_RS25340 () | 46227..50126 | - | 3900 | WP_061357918.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| IG172_RS25345 () | 50164..50274 | - | 111 | Protein_44 | fimbrial | - |
| IG172_RS25350 () | 50376..51070 | + | 695 | Protein_45 | IS21 family transposase IS21 | Transposase |
| IG172_RS25355 () | 51070..51867 | + | 798 | WP_069917648.1 | IS21 family transposase IS21 | Transposase |
| IG172_RS25360 () | 51928..54236 | + | 2309 | Protein_47 | hypothetical protein | - |
| IG172_RS25365 () | 54702..54846 | - | 145 | Protein_48 | VapC toxin family PIN domain ribonuclease | - |
| IG172_RS25370 () | 54889..55398 | - | 510 | WP_061351579.1 | hypothetical protein | - |
| IG172_RS25375 () | 55921..56019 | - | 99 | Protein_50 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IG172_RS25380 () | 56016..56285 | - | 270 | WP_069917650.1 | hypothetical protein | - |
| IG172_RS25385 () | 57200..58057 | - | 858 | WP_061357915.1 | incFII family plasmid replication initiator RepA | - |
| IG172_RS25390 () | 58050..58124 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IG172_RS25395 () | 58357..58614 | - | 258 | WP_001473586.1 | replication regulatory protein RepA | - |
| IG172_RS25400 () | 58854..59444 | - | 591 | WP_094029543.1 | DUF2726 domain-containing protein | - |
| IG172_RS25405 () | 59596..60222 | - | 627 | WP_032215029.1 | hypothetical protein | - |
| IG172_RS25410 () | 60634..60843 | - | 210 | WP_001297500.1 | hypothetical protein | - |
| IG172_RS25415 () | 60974..61534 | - | 561 | WP_069917652.1 | fertility inhibition protein FinO | - |
| IG172_RS25420 () | 61637..62497 | - | 861 | WP_069917653.1 | putative protein YcjY | VF |
| IG172_RS25425 () | 62556..63302 | - | 747 | WP_032215026.1 | conjugal transfer pilus acetylase TraX | - |
| IG172_RS25430 () | 63322..68592 | - | 5271 | WP_192292555.1 | Multifunctional conjugation protein TraI | Relaxase |
| IG172_RS25435 () | 68592..70781 | - | 2190 | WP_192292558.1 | type IV conjugative transfer system coupling protein TraD | - |
| IG172_RS25440 () | 71062..71541 | - | 480 | WP_192292561.1 | hypothetical protein | - |
| IG172_RS25445 () | 71745..72476 | - | 732 | WP_192292564.1 | complement resistance protein TraT | - |
| IG172_RS25450 () | 72508..73005 | - | 498 | WP_192292483.1 | surface exclusion protein | - |
| IG172_RS25455 () | 73030..75843 | - | 2814 | WP_192292486.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IG172_RS25460 () | 75840..77213 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| IG172_RS25465 () | 77213..77575 | - | 363 | WP_115725133.1 | P-type conjugative transfer protein TrbJ | - |
| IG172_RS25470 () | 77505..78050 | - | 546 | WP_192292489.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IG172_RS25475 () | 78037..78321 | - | 285 | WP_192292492.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IG172_RS25480 () | 78440..78787 | - | 348 | WP_192292494.1 | conjugal transfer protein TrbA | - |
| IG172_RS25485 () | 78803..79546 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IG172_RS25490 () | 79539..79796 | - | 258 | WP_000864346.1 | conjugal transfer protein TrbE | - |
| IG172_RS25495 () | 79823..81610 | - | 1788 | WP_192292566.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IG172_RS25500 () | 81920..82300 | - | 381 | WP_039052469.1 | hypothetical protein | - |
| IG172_RS25505 () | 82297..82935 | - | 639 | WP_040089490.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IG172_RS25510 () | 82963..83415 | - | 453 | WP_112025677.1 | hypothetical protein | - |
| IG172_RS25515 () | 83445..83906 | - | 462 | WP_069917783.1 | hypothetical protein | - |
| IG172_RS25520 () | 83932..84924 | - | 993 | WP_192292497.1 | conjugal transfer pilus assembly protein TraU | - |
| IG172_RS25525 () | 84921..85553 | - | 633 | WP_192292500.1 | type-F conjugative transfer system protein TraW | - |
| IG172_RS25530 () | 85550..85936 | - | 387 | WP_192292503.1 | type-F conjugative transfer system protein TrbI | - |
| IG172_RS25535 () | 85933..88560 | - | 2628 | WP_192292506.1 | type IV secretion system protein TraC | - |
| IG172_RS25540 () | 88720..88941 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| IG172_RS25545 () | 89076..89591 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IG172_RS25550 () | 89588..89839 | - | 252 | WP_192292509.1 | conjugal transfer protein TrbG | - |
| IG172_RS25555 () | 89832..90185 | - | 354 | WP_192292512.1 | conjugal transfer protein TrbD | - |
| IG172_RS25560 () | 90139..90729 | - | 591 | WP_078206159.1 | conjugal transfer protein TraP | - |
| IG172_RS25565 () | 90719..92146 | - | 1428 | WP_089622000.1 | conjugal transfer protein TraB | - |
| IG172_RS25570 () | 92146..92850 | - | 705 | WP_192292568.1 | type-F conjugative transfer system secretin TraK | - |
| IG172_RS25575 () | 92861..93427 | - | 567 | WP_192292514.1 | type IV conjugative transfer system protein TraE | - |
| IG172_RS25580 () | 93449..93760 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IG172_RS25585 () | 93775..94134 | - | 360 | WP_069907062.1 | type IV conjugative transfer system pilin TraA | - |
| IG172_RS25590 () | 94178..94393 | - | 216 | WP_077888289.1 | conjugal transfer relaxosome protein TraY | - |
| IG172_RS25595 () | 94529..95176 | - | 648 | WP_069907063.1 | conjugal transfer transcriptional regulator TraJ | - |
| IG172_RS25600 () | 95357..95749 | - | 393 | WP_192292517.1 | relaxosome protein TraM | - |
| IG172_RS25605 () | 96025..96672 | + | 648 | WP_139124686.1 | hypothetical protein | VF |
| IG172_RS25610 () | 96969..97790 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| IG172_RS25615 () | 97910..98107 | - | 198 | WP_052318758.1 | hypothetical protein | - |
| IG172_RS25620 () | 98221..98427 | - | 207 | WP_069907064.1 | single-stranded DNA-binding protein | - |
| IG172_RS25625 () | 98340..98675 | - | 336 | WP_192292570.1 | hypothetical protein | - |
| IG172_RS25630 () | 99118..99276 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 99320..99544 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 99320..99544 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 99320..99544 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 99320..99544 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| IG172_RS25635 () | 99356..99544 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| IG172_RS25640 () | 99556..100275 | - | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| IG172_RS25645 () | 100272..100706 | - | 435 | WP_032217500.1 | conjugation system SOS inhibitor PsiB | - |
| IG172_RS25650 () | 100775..102739 | - | 1965 | WP_192292520.1 | ParB/RepB/Spo0J family partition protein | - |
| IG172_RS25655 () | 102804..103037 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| IG172_RS25660 () | 103099..103674 | - | 576 | WP_192292523.1 | single-stranded DNA-binding protein | - |
| IG172_RS25665 () | 103700..103906 | - | 207 | WP_192292526.1 | single-stranded DNA-binding protein | - |
| IG172_RS25670 () | 103819..104154 | - | 336 | WP_192292573.1 | hypothetical protein | - |
| IG172_RS25675 () | 104526..105089 | - | 564 | WP_192292529.1 | class I SAM-dependent methyltransferase | - |
| IG172_RS25680 () | 105136..106497 | - | 1362 | WP_000170669.1 | DUF3560 domain-containing protein | - |
| IG172_RS25685 () | 106549..106779 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| IG172_RS25690 () | 107459..107803 | + | 345 | WP_192292532.1 | pilus assembly protein | - |
| IG172_RS25695 () | 107773..107964 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| IG172_RS25700 () | 107961..108383 | - | 423 | WP_192292534.1 | DUF1380 family protein | - |
| IG172_RS25705 () | 108430..108732 | - | 303 | WP_072248692.1 | antirestriction protein | - |
| IG172_RS25710 () | 109269..110045 | - | 777 | WP_042974082.1 | hypothetical protein | - |
| IG172_RS25715 () | 110091..110258 | - | 168 | Protein_118 | DUF1380 family protein | - |
| IG172_RS25720 () | 110261..111129 | + | 869 | Protein_119 | translesion error-prone DNA polymerase V subunit UmuC | - |
| IG172_RS25725 () | 111266..112237 | - | 972 | WP_001233384.1 | ParB/RepB/Spo0J family partition protein | - |
| IG172_RS25730 () | 112234..113439 | - | 1206 | WP_001401628.1 | Plasmid partition protein A | VF |
| IG172_RS25735 () | 114060..114791 | + | 732 | WP_000504263.1 | replication initiation protein | - |
| IG172_RS25740 () | 115478..116284 | - | 807 | Protein_123 | phage integrase family protein | - |
| IG172_RS25745 () | 116285..116590 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IG172_RS25750 () | 116592..116810 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IG172_RS25755 () | 119426..121639 | + | 2214 | WP_077888293.1 | Outer membrane protein IcsA autotransporter | VF |
| IG172_RS25760 () | 121991..122125 | - | 135 | Protein_127 | transposase domain-containing protein | - |
| IG172_RS25765 () | 123197..124423 | + | 1227 | WP_192292537.1 | phosphoadenosine phosphosulfate reductase | - |
| IG172_RS25770 () | 124408..125046 | + | 639 | WP_069917554.1 | ParB N-terminal domain-containing protein | - |
| IG172_RS25775 () | 125210..125413 | - | 204 | Protein_130 | IS256 family transposase ISEic2 | Transposase |
| IG172_RS25780 () | 126149..127171 | + | 1023 | WP_069907201.1 | IS110 family transposase ISSm1 | Transposase |
| IG172_RS25785 () | 127466..127951 | - | 486 | WP_000501973.1 | GNAT family N-acetyltransferase | Toxin Detail |
| IG172_RS25790 () | 127939..128223 | - | 285 | WP_001352814.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| IG172_RS25795 () | 128614..130101 | - | 1488 | WP_077888917.1 | alpha/beta hydrolase | - |
| IG172_RS25800 () | 130206..131153 | - | 948 | WP_032215132.1 | Outer membrane protease OmpP | VF |
| IG172_RS25805 () | 131391..131546 | - | 156 | Protein_136 | transposase domain-containing protein | - |
| IG172_RS25810 () | 131602..131944 | - | 343 | Protein_137 | IS3 family transposase | - |
| IG172_RS25815 () | 132022..133458 | - | 1437 | WP_061348415.1 | Hemolysin secretion protein D, plasmid | VF |
| IG172_RS25820 () | 133477..135600 | - | 2124 | WP_069907196.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| IG172_RS25825 () | 135672..138746 | - | 3075 | WP_032215128.1 | Hemolysin, plasmid | VF |
| IG172_RS25830 () | 138758..139270 | - | 513 | WP_021569014.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| IG172_RS25835 () | 140580..141549 | + | 970 | Protein_142 | IS3 family transposase ISKpn38 | Transposase |
| IG172_RS25840 () | 141582..142265 | - | 684 | Protein_143 | hypothetical protein | - |
| IG172_RS25845 () | 142207..143264 | - | 1058 | Protein_144 | IS256 family transposase ISEic2 | Transposase |
| IG172_RS25850 () | 143608..143721 | - | 114 | Protein_145 | transposase domain-containing protein | - |
| IG172_RS25855 () | 143824..143925 | + | 102 | Protein_146 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|