MGE detailed information
MGE type: Conjugative plasmid MGE length: 68025 bp
Accession: NZ_CP061915 Location: 1..68025 Organism: Escherichia coli strain SMBL Replicon: plasmid p1
Accession: NZ_CP061915 Location: 1..68025 Organism: Escherichia coli strain SMBL Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IE857_RS23550 () | 1..858 | + | 858 | WP_126303380.1 | incFII family plasmid replication initiator RepA | - |
| IE857_RS23555 () | 1557..1715 | + | 159 | WP_170994243.1 | hypothetical protein | - |
| IE857_RS23560 () | 1770..2039 | + | 270 | WP_042021804.1 | hypothetical protein | Antitoxin Detail |
| IE857_RS23565 () | 2036..2317 | + | 282 | WP_191596536.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IE857_RS23570 () | 2405..2752 | + | 348 | WP_000142441.1 | hypothetical protein | - |
| IE857_RS23575 () | 2770..3360 | - | 591 | WP_000194574.1 | hypothetical protein | - |
| IE857_RS23580 () | 3360..3617 | - | 258 | WP_001542562.1 | hypothetical protein | - |
| IE857_RS23585 () | 4184..4597 | + | 414 | WP_191596537.1 | hypothetical protein | - |
| IE857_RS23590 () | 4599..5384 | + | 786 | WP_019842589.1 | site-specific integrase | - |
| IE857_RS23595 () | 5968..6600 | + | 633 | WP_000312331.1 | ParA family protein | - |
| IE857_RS23600 () | 6600..6974 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| IE857_RS23605 () | 7214..8188 | + | 975 | WP_001217836.1 | hypothetical protein | - |
| IE857_RS23610 () | 8192..8584 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| IE857_RS23615 () | 8719..8847 | - | 129 | Protein_14 | DinI family protein | - |
| IE857_RS23620 () | 9265..10167 | + | 903 | WP_191596545.1 | DUF1281 domain-containing protein | - |
| IE857_RS23625 () | 10164..10475 | + | 312 | WP_032317461.1 | hypothetical protein | - |
| IE857_RS23630 () | 10551..11234 | + | 684 | WP_000086185.1 | DNA methylase | - |
| IE857_RS23635 () | 11235..11456 | + | 222 | WP_001104867.1 | hypothetical protein | - |
| IE857_RS23640 () | 11470..11904 | + | 435 | WP_191596538.1 | DUF1380 family protein | - |
| IE857_RS23645 () | 11949..12719 | + | 771 | WP_191596539.1 | hypothetical protein | - |
| IE857_RS23650 () | 13257..13559 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| IE857_RS23655 () | 13606..14025 | + | 420 | WP_044257555.1 | DUF1380 family protein | - |
| IE857_RS23660 () | 14025..14216 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| IE857_RS23665 () | 14186..14504 | - | 319 | Protein_24 | pilus assembly protein | - |
| IE857_RS23670 () | 15182..15412 | + | 231 | WP_000218649.1 | hypothetical protein | - |
| IE857_RS23675 () | 15464..16825 | + | 1362 | WP_191596540.1 | DUF3560 domain-containing protein | - |
| IE857_RS23680 () | 16872..17435 | + | 564 | WP_191596541.1 | class I SAM-dependent methyltransferase | - |
| IE857_RS23685 () | 18011..18217 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| IE857_RS23690 () | 18243..18764 | + | 522 | WP_191596542.1 | single-stranded DNA-binding protein | - |
| IE857_RS23695 () | 18822..19055 | + | 234 | WP_001478623.1 | DUF905 family protein | - |
| IE857_RS23700 () | 19115..21079 | + | 1965 | WP_191596543.1 | ParB/RepB/Spo0J family partition protein | - |
| IE857_RS23705 () | 21148..21582 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| IE857_RS23710 () | 21579..22298 | + | 720 | WP_191596544.1 | plasmid SOS inhibition protein A | - |
| - () | 22310..22534 | + | 225 | NuclAT_0 | - | - |
| - () | 22310..22534 | + | 225 | NuclAT_0 | - | - |
| - () | 22310..22534 | + | 225 | NuclAT_0 | - | - |
| - () | 22310..22534 | + | 225 | NuclAT_0 | - | - |
| IE857_RS23715 () | 22578..22736 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IE857_RS23720 () | 23037..23333 | - | 297 | Protein_35 | hypothetical protein | - |
| IE857_RS23725 () | 23403..23606 | + | 204 | Protein_36 | single-stranded DNA-binding protein | - |
| IE857_RS23730 () | 23629..23952 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| IE857_RS23735 () | 24011..24253 | + | 243 | WP_137545882.1 | hypothetical protein | - |
| IE857_RS23740 () | 24946..25152 | + | 207 | WP_000547974.1 | hypothetical protein | - |
| IE857_RS23745 () | 25176..25472 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| IE857_RS23750 () | 25583..26404 | + | 822 | WP_021553189.1 | DUF945 domain-containing protein | - |
| IE857_RS23755 () | 26700..27209 | - | 510 | WP_021553190.1 | transglycosylase SLT domain-containing protein | - |
| IE857_RS23760 () | 27623..28009 | + | 387 | WP_000124826.1 | relaxosome protein TraM | - |
| IE857_RS23765 () | 28198..28887 | + | 690 | WP_000332474.1 | PAS domain-containing protein | - |
| IE857_RS23770 () | 28975..29202 | + | 228 | WP_096936277.1 | conjugal transfer relaxosome protein TraY | - |
| IE857_RS23775 () | 29236..29601 | + | 366 | WP_097178401.1 | type IV conjugative transfer system pilin TraA | - |
| IE857_RS23780 () | 29616..29927 | + | 312 | WP_097178400.1 | type IV conjugative transfer system protein TraL | - |
| IE857_RS23785 () | 29949..30515 | + | 567 | WP_021553195.1 | type IV conjugative transfer system protein TraE | - |
| IE857_RS23790 () | 30526..31230 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IE857_RS23795 () | 31230..32660 | + | 1431 | WP_097178399.1 | conjugal transfer protein TraB | - |
| IE857_RS23800 () | 32650..33234 | + | 585 | WP_096936312.1 | conjugal transfer protein TraP | - |
| IE857_RS23805 () | 33188..33541 | + | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| IE857_RS23810 () | 33534..33785 | + | 252 | WP_096936314.1 | conjugal transfer protein TrbG | - |
| IE857_RS23815 () | 33782..34297 | + | 516 | WP_097178398.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IE857_RS23820 () | 34432..34653 | + | 222 | WP_191596526.1 | conjugal transfer protein TraR | - |
| IE857_RS23825 () | 34646..35119 | + | 474 | WP_097178396.1 | hypothetical protein | - |
| IE857_RS23830 () | 35116..35502 | + | 387 | WP_096936275.1 | hypothetical protein | - |
| IE857_RS23835 () | 35582..35830 | + | 249 | WP_097178395.1 | hypothetical protein | - |
| IE857_RS23840 () | 35827..36174 | + | 348 | WP_021553203.1 | hypothetical protein | - |
| IE857_RS23845 () | 36305..38935 | + | 2631 | WP_097178394.1 | type IV secretion system protein TraC | - |
| IE857_RS23850 () | 38932..39318 | + | 387 | WP_021553205.1 | type-F conjugative transfer system protein TrbI | - |
| IE857_RS23855 () | 39315..39947 | + | 633 | WP_021569944.1 | type-F conjugative transfer system protein TraW | - |
| IE857_RS23860 () | 39944..40936 | + | 993 | WP_000817325.1 | conjugal transfer pilus assembly protein TraU | - |
| IE857_RS23865 () | 40963..41295 | + | 333 | WP_191596527.1 | hypothetical protein | - |
| IE857_RS23870 () | 41423..42061 | + | 639 | WP_021553225.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IE857_RS23875 () | 42058..43908 | + | 1851 | WP_097231216.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IE857_RS23880 () | 43934..44191 | + | 258 | WP_191596546.1 | conjugal transfer protein TrbE | - |
| IE857_RS23885 () | 44184..44927 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IE857_RS23890 () | 44941..45306 | + | 366 | WP_021572669.1 | hypothetical protein | - |
| IE857_RS23895 () | 45392..45838 | + | 447 | WP_024244298.1 | hypothetical protein | - |
| IE857_RS23900 () | 45905..46186 | + | 282 | WP_191596528.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IE857_RS23905 () | 46173..46718 | + | 546 | WP_040084549.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IE857_RS23910 () | 46648..46995 | + | 348 | WP_191596529.1 | P-type conjugative transfer protein TrbJ | - |
| IE857_RS23915 () | 46943..47368 | + | 426 | WP_191596530.1 | F-type conjugal transfer protein TrbF | - |
| IE857_RS23920 () | 47355..48728 | + | 1374 | WP_191596531.1 | conjugal transfer protein TraH | - |
| IE857_RS23925 () | 48725..51544 | + | 2820 | WP_191596532.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IE857_RS23930 () | 51547..51858 | - | 312 | WP_000522220.1 | heavy metal-binding domain-containing protein | - |
| IE857_RS23935 () | 52012..52800 | + | 789 | WP_097741602.1 | hypothetical protein | - |
| IE857_RS23940 () | 52976..53707 | + | 732 | WP_191596547.1 | hypothetical protein | - |
| IE857_RS23945 () | 53763..55988 | + | 2226 | WP_191596533.1 | type IV conjugative transfer system coupling protein TraD | - |
| IE857_RS23950 () | 55988..61258 | + | 5271 | WP_191596534.1 | conjugative transfer relaxase/helicase TraI | - |
| IE857_RS23955 () | 61278..62024 | + | 747 | WP_191596535.1 | conjugal transfer pilus acetylase TraX | - |
| IE857_RS23960 () | 62079..62639 | + | 561 | WP_021569950.1 | fertility inhibition protein FinO | - |
| IE857_RS23965 () | 64055..65008 | + | 954 | Protein_84 | YadA-like family protein | - |
| IE857_RS23970 () | 65010..65471 | + | 462 | WP_021553165.1 | thermonuclease family protein | - |
| IE857_RS23975 () | 65517..65726 | + | 210 | WP_137545870.1 | hemolysin expression modulator Hha | - |
| IE857_RS23980 () | 65764..66450 | + | 687 | WP_097178542.1 | DUF2726 domain-containing protein | - |
| IE857_RS23985 () | 66447..66755 | + | 309 | WP_100033842.1 | hypothetical protein | - |
| - () | 66930..66988 | - | 59 | NuclAT_1 | - | - |
| - () | 66930..66988 | - | 59 | NuclAT_1 | - | - |
| - () | 66930..66988 | - | 59 | NuclAT_1 | - | - |
| - () | 66930..66988 | - | 59 | NuclAT_1 | - | - |
| IE857_RS23990 () | 67034..67183 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IE857_RS23995 () | 67467..67724 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|