MGE detailed information
MGE type: Conjugative plasmid MGE length: 147909 bp
Accession: NZ_CP060970 Location: 1..147909 Organism: Escherichia coli strain EC5 Replicon: plasmid pEC5-2
Accession: NZ_CP060970 Location: 1..147909 Organism: Escherichia coli strain EC5 Replicon: plasmid pEC5-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
H9193_RS23255 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
H9193_RS23260 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
H9193_RS23265 (2124) | 2124..2312 | - | 189 | WP_014640565.1 | hypothetical protein | - |
H9193_RS23270 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
H9193_RS23275 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
H9193_RS23280 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
H9193_RS23285 (6256) | 6256..6645 | + | 390 | WP_001332050.1 | IS110 family transposase ISEc20 | Transposase |
H9193_RS23290 (7449) | 7449..7628 | - | 180 | Protein_7 | integrase core domain-containing protein | - |
H9193_RS23295 (7767) | 7767..8506 | + | 740 | Protein_8 | IS3 family transposase IS629 | Transposase |
H9193_RS25260 (9018) | 9018..9140 | + | 123 | WP_001406634.1 | hypothetical protein | - |
H9193_RS23300 (9179) | 9179..10687 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
H9193_RS23305 (10771) | 10771..11250 | + | 480 | Protein_11 | IS3 family transposase IS629 | Transposase |
H9193_RS23310 (11398) | 11398..11666 | - | 269 | Protein_12 | IS3 family transposase ISLad1 | Transposase |
H9193_RS23315 (11723) | 11723..12420 | + | 698 | WP_224158172.1 | IS1-like element IS1A family transposase | - |
H9193_RS23320 (12498) | 12498..13887 | - | 1390 | Protein_14 | ISNCY family transposase ISKpn21 | Transposase |
H9193_RS23325 (14197) | 14197..14346 | - | 150 | Protein_15 | IS3 family transposase IS2 | Transposase |
H9193_RS23330 (14524) | 14524..15717 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
H9193_RS23335 (16940) | 16940..18176 | - | 1237 | Protein_17 | IS3 family transposase IS2 | Transposase |
H9193_RS23340 (18803) | 18803..19096 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
H9193_RS23350 (19154) | 19154..19353 | - | 200 | Protein_19 | lysis protein | - |
H9193_RS23355 (19907) | 19907..20935 | + | 1029 | Protein_20 | integrase core domain-containing protein | - |
H9193_RS23360 (22246) | 22246..23361 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
H9193_RS23365 (23501) | 23501..27160 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
H9193_RS23370 (27264) | 27264..28493 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
H9193_RS23375 (28578) | 28578..29534 | + | 957 | WP_064055648.1 | Ferri-bacillibactin esterase BesA | VF |
H9193_RS23380 (29579) | 29579..31756 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
H9193_RS23385 (31991) | 31991..32688 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
H9193_RS23390 (33079) | 33079..33264 | + | 186 | Protein_27 | hypothetical protein | - |
H9193_RS23395 (33282) | 33282..33629 | - | 348 | WP_000142450.1 | DUF6404 family protein | - |
H9193_RS23400 (33931) | 33931..34413 | - | 483 | WP_001311056.1 | hypothetical protein | - |
H9193_RS23405 (34530) | 34530..35378 | - | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
H9193_RS23410 (35424) | 35424..35702 | - | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | - |
H9193_RS23420 (35812) | 35812..37326 | - | 1515 | Protein_32 | Tn3 family transposase TnpA_TnAs1 | Transposase |
H9193_RS23425 (37392) | 37392..38096 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
H9193_RS23430 (38399) | 38399..39274 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
H9193_RS23435 (39309) | 39309..39626 | + | 318 | Protein_35 | IS5 family transposase IS903B | Transposase |
H9193_RS23440 (39886) | 39886..40302 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
H9193_RS23445 (40307) | 40307..40825 | - | 519 | WP_014839979.1 | FidL-like protein | - |
H9193_RS23450 (40825) | 40825..41571 | - | 747 | WP_071448054.1 | winged helix-turn-helix domain-containing protein | - |
H9193_RS23455 (41577) | 41577..42281 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
H9193_RS23460 (42395) | 42395..43171 | + | 777 | WP_001199192.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
H9193_RS23465 (43400) | 43400..44300 | + | 901 | Protein_41 | phosphotransferase | - |
H9193_RS23470 (44375) | 44375..44614 | + | 240 | Protein_42 | AAC(3) family N-acetyltransferase | - |
H9193_RS23475 (44722) | 44722..45474 | - | 753 | WP_000602738.1 | IS6 family transposase ISRle7 | Transposase |
H9193_RS23480 (45536) | 45536..47059 | + | 1524 | Protein_44 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
H9193_RS23485 (47119) | 47119..47247 | + | 129 | WP_032073144.1 | hypothetical protein | - |
H9193_RS23490 (47285) | 47285..47770 | + | 486 | WP_006581703.1 | hypothetical protein | - |
H9193_RS23500 (49147) | 49147..49962 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
H9193_RS23505 (50049) | 50049..50291 | + | 243 | Protein_49 | phosphoglucosamine mutase | - |
H9193_RS23510 (50527) | 50527..52020 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
H9193_RS23515 (52132) | 52132..52437 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
H9193_RS23520 (52465) | 52465..53679 | - | 1215 | WP_000214122.1 | Bicyclomycin resistance protein | ARG |
H9193_RS23525 (53896) | 53896..54780 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
H9193_RS23530 (54811) | 54811..55641 | - | 831 | Protein_54 | IS91 family transposase ISVsa3 | Transposase |
H9193_RS23535 (55705) | 55705..56409 | + | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
H9193_RS23540 (56494) | 56494..56970 | - | 477 | WP_223171565.1 | hypothetical protein | - |
H9193_RS23545 (56904) | 56904..59855 | - | 2952 | WP_015344976.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
H9193_RS23550 (59858) | 59858..60418 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
H9193_RS23555 (60544) | 60544..60894 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
H9193_RS23560 (61097) | 61097..62110 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
H9193_RS23565 (62255) | 62255..62752 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
H9193_RS23570 (62864) | 62864..63154 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
H9193_RS23575 (63160) | 63160..63998 | + | 839 | Protein_63 | Streptomycin 3''-adenylyltransferase | ARG |
H9193_RS23580 (64115) | 64115..64462 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
H9193_RS23585 (64456) | 64456..64788 | + | 333 | Protein_65 | IS6 family transposase IS15 | Transposase |
H9193_RS23590 (64845) | 64845..65549 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
H9193_RS23595 (65678) | 65678..66442 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
H9193_RS23600 (66935) | 66935..67519 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
H9193_RS23605 (67519) | 67519..68757 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
H9193_RS23610 (68754) | 68754..69659 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
H9193_RS23615 (69781) | 69781..70485 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
H9193_RS23620 (70636) | 70636..71451 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
H9193_RS23625 (71641) | 71641..72345 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
H9193_RS23630 (72410) | 72410..73660 | - | 1251 | Protein_74 | transposase | - |
H9193_RS23635 (73731) | 73731..74435 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
H9193_RS23640 (74500) | 74500..75684 | + | 1185 | Protein_76 | DUF87 domain-containing protein | - |
H9193_RS23645 (75681) | 75681..76067 | + | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
H9193_RS23650 (76064) | 76064..76696 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
H9193_RS23655 (76693) | 76693..77685 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
H9193_RS23660 (77694) | 77694..78332 | + | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
H9193_RS23665 (78329) | 78329..80137 | + | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
H9193_RS23670 (80164) | 80164..80421 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
H9193_RS23675 (80414) | 80414..81157 | + | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
H9193_RS23680 (81173) | 81173..81520 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
H9193_RS23685 (81522) | 81522..81836 | - | 315 | WP_001324103.1 | hypothetical protein | - |
H9193_RS23690 (81917) | 81917..82201 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
H9193_RS23695 (82188) | 82188..82733 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
H9193_RS23700 (82663) | 82663..83004 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
H9193_RS23705 (82991) | 82991..83371 | + | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
H9193_RS23710 (83371) | 83371..84744 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
H9193_RS23715 (84741) | 84741..87563 | + | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
H9193_RS23720 (87579) | 87579..88076 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
H9193_RS23725 (88108) | 88108..88839 | + | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
H9193_RS23730 (89092) | 89092..91245 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
H9193_RS23735 (91254) | 91254..91652 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
H9193_RS23740 (91652) | 91652..91879 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
H9193_RS23745 (91961) | 91961..97231 | + | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
H9193_RS23750 (97251) | 97251..97997 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
H9193_RS23755 (98056) | 98056..98916 | + | 861 | WP_000704514.1 | putative protein YcjY | VF |
H9193_RS23760 (99019) | 99019..99579 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
H9193_RS23765 (99715) | 99715..99927 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
H9193_RS23770 (100173) | 100173..100247 | + | 75 | Protein_102 | endonuclease | - |
- (100503) | 100503..100564 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
- (100503) | 100503..100564 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
- (100503) | 100503..100564 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
- (100503) | 100503..100564 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
H9193_RS23775 (100608) | 100608..100757 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
H9193_RS23780 (101041) | 101041..101298 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
H9193_RS23785 (101315) | 101315..101566 | - | 252 | WP_223195197.1 | replication protein RepA | - |
H9193_RS23790 (101557) | 101557..101604 | + | 48 | WP_229471593.1 | hypothetical protein | - |
H9193_RS23795 (101597) | 101597..102079 | + | 483 | WP_001273588.1 | hypothetical protein | - |
H9193_RS23800 (102072) | 102072..102929 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
H9193_RS23805 (103868) | 103868..104521 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
H9193_RS23810 (104614) | 104614..104871 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
H9193_RS23815 (104804) | 104804..105205 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
H9193_RS23820 (105490) | 105490..106800 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
H9193_RS23825 (106829) | 106829..106927 | + | 99 | Protein_113 | IS1 family transposase | - |
H9193_RS23830 (107077) | 107077..107937 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
H9193_RS23835 (108240) | 108240..108944 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
H9193_RS23840 (108998) | 108998..110446 | - | 1449 | Protein_116 | TraC family protein | - |
H9193_RS23845 (110606) | 110606..110827 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
H9193_RS23850 (110962) | 110962..111477 | - | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
H9193_RS23855 (111474) | 111474..111725 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
H9193_RS23860 (111737) | 111737..111934 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
H9193_RS23865 (111921) | 111921..112511 | - | 591 | WP_000002778.1 | conjugal transfer pilus-stabilizing protein TraP | - |
H9193_RS23870 (112501) | 112501..113928 | - | 1428 | WP_167731963.1 | F-type conjugal transfer pilus assembly protein TraB | - |
H9193_RS23875 (113928) | 113928..114656 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
H9193_RS23880 (114643) | 114643..115209 | - | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
H9193_RS23885 (115231) | 115231..115542 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
H9193_RS23890 (115557) | 115557..115922 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
H9193_RS23895 (115955) | 115955..116356 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
H9193_RS23900 (116449) | 116449..117138 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
H9193_RS23905 (117325) | 117325..117708 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
H9193_RS23910 (118029) | 118029..118631 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
H9193_RS23915 (118928) | 118928..119749 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
H9193_RS23920 (119867) | 119867..120154 | - | 288 | WP_000107535.1 | hypothetical protein | - |
H9193_RS23925 (120179) | 120179..120385 | - | 207 | WP_000547968.1 | hypothetical protein | - |
H9193_RS23930 (120455) | 120455..120627 | + | 173 | Protein_134 | hypothetical protein | - |
H9193_RS23935 (120625) | 120625..120855 | - | 231 | WP_071586998.1 | hypothetical protein | - |
H9193_RS23940 (121075) | 121075..121200 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
H9193_RS23945 (121142) | 121142..121291 | - | 150 | Protein_137 | plasmid maintenance protein Mok | - |
- (121277) | 121277..121308 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- (121277) | 121277..121308 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- (121277) | 121277..121308 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- (121277) | 121277..121308 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- (122750) | 122750..122947 | - | 198 | NuclAT_0 | - | - |
- (122750) | 122750..122947 | - | 198 | NuclAT_0 | - | - |
- (122750) | 122750..122947 | - | 198 | NuclAT_0 | - | - |
- (122750) | 122750..122947 | - | 198 | NuclAT_0 | - | - |
H9193_RS23955 (122759) | 122759..122947 | + | 189 | WP_001299721.1 | hypothetical protein | - |
H9193_RS23960 (122916) | 122916..123678 | - | 763 | Protein_140 | plasmid SOS inhibition protein A | - |
H9193_RS23965 (123675) | 123675..124109 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
H9193_RS23970 (124164) | 124164..124361 | - | 198 | Protein_142 | hypothetical protein | - |
H9193_RS23975 (124389) | 124389..124622 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
H9193_RS23980 (124690) | 124690..125229 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
H9193_RS23985 (125255) | 125255..125461 | - | 207 | WP_000275856.1 | hypothetical protein | - |
H9193_RS23990 (125531) | 125531..125611 | + | 81 | Protein_146 | hypothetical protein | - |
H9193_RS23995 (125794) | 125794..125963 | - | 170 | Protein_147 | hypothetical protein | - |
H9193_RS24000 (126557) | 126557..127528 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
H9193_RS24005 (127528) | 127528..128694 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
H9193_RS24015 (130176) | 130176..132377 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
H9193_RS24020 (132403) | 132403..133736 | - | 1334 | Protein_152 | L-lysine N6-monooxygenase | VF |
H9193_RS24025 (133733) | 133733..135475 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
H9193_RS24030 (135475) | 135475..136422 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
H9193_RS24035 (136423) | 136423..138147 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
H9193_RS24040 (138283) | 138283..139476 | + | 1194 | WP_000095526.1 | MFS transporter | - |
H9193_RS24045 (139856) | 139856..140236 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
H9193_RS24050 (140577) | 140577..140990 | - | 414 | Protein_158 | phosphopyruvate hydratase | - |
H9193_RS24055 (140988) | 140988..141245 | + | 258 | Protein_159 | Tn3 family transposase | - |
H9193_RS24060 (141479) | 141479..142336 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
H9193_RS24065 (142333) | 142333..143190 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
H9193_RS24070 (143187) | 143187..144014 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
H9193_RS24075 (144014) | 144014..144928 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
H9193_RS24080 (145284) | 145284..145981 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
H9193_RS24085 (146161) | 146161..146674 | - | 514 | Protein_165 | DUF4113 domain-containing protein | - |
H9193_RS24090 (146735) | 146735..146839 | - | 105 | Protein_166 | AAA family ATPase | - |
H9193_RS24095 (146841) | 146841..147164 | - | 324 | Protein_167 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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