MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP060708 Location: 1394318..1395298 Organism: Escherichia coli strain MFDpir Replicon: chromosome
Accession: NZ_CP060708 Location: 1394318..1395298 Organism: Escherichia coli strain MFDpir Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9446_RS06820 () | 1390197..1391096 | + | 900 | WP_000817708.1 | DNA-binding transcriptional regulator PgrR | - |
| H9446_RS06825 () | 1391433..1393046 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| H9446_RS06830 () | 1393097..1394128 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| H9446_RS06835 () | 1394282..1395298 | + | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| H9446_RS06840 () | 1395586..1396398 | - | 813 | Protein_1329 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| H9446_RS06845 () | 1396450..1397685 | - | 1236 | WP_000040852.1 | site-specific integrase | - |
| H9446_RS06850 () | 1397687..1397902 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| H9446_RS06855 () | 1397981..1398190 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1398006..1398184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398006..1398184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398006..1398184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398006..1398184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| H9446_RS06860 () | 1398183..1398377 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| H9446_RS06865 () | 1398434..1399243 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0 |