MGE detailed information
MGE type: Prophage MGE length: 40711 bp
Accession: NZ_CP060159 Location: 1155062..1195772 Organism: Xylella fastidiosa subsp. fastidiosa strain GV230 Replicon: chromosome
Accession: NZ_CP060159 Location: 1155062..1195772 Organism: Xylella fastidiosa subsp. fastidiosa strain GV230 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFGV230_RS04835 () | 1150349..1150603 | - | 255 | WP_004089715.1 | hypothetical protein | - |
| XFGV230_RS04840 () | 1150777..1151109 | - | 333 | WP_004089713.1 | DNA-binding transcriptional regulator | - |
| XFGV230_RS04845 () | 1151835..1152700 | - | 866 | Protein_936 | serine protease | - |
| XFGV230_RS04850 () | 1153187..1154191 | - | 1005 | WP_128723193.1 | peptidase | - |
| XFGV230_RS04855 () | 1154351..1154548 | - | 198 | WP_012382581.1 | hypothetical protein | - |
| XFGV230_RS04860 () | 1155062..1156225 | - | 1164 | WP_038232954.1 | phage tail protein | - |
| XFGV230_RS04865 () | 1156229..1156789 | - | 561 | WP_014607744.1 | DUF2612 domain-containing protein | - |
| XFGV230_RS04870 () | 1156786..1157921 | - | 1136 | Protein_941 | baseplate J/gp47 family protein | - |
| XFGV230_RS04875 () | 1158020..1158316 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFGV230_RS04880 () | 1158320..1158625 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| XFGV230_RS04885 () | 1158636..1158989 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| XFGV230_RS04890 () | 1158986..1159627 | - | 642 | WP_004090764.1 | hypothetical protein | - |
| XFGV230_RS04895 () | 1159624..1160454 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| XFGV230_RS04900 () | 1160451..1160768 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| XFGV230_RS04905 () | 1160768..1161538 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| XFGV230_RS04910 () | 1161649..1161876 | + | 228 | WP_004091377.1 | hypothetical protein | Antitoxin Detail |
| XFGV230_RS04915 () | 1161860..1162126 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFGV230_RS04920 () | 1162137..1164026 | - | 1890 | WP_011097989.1 | hypothetical protein | - |
| XFGV230_RS04925 () | 1163983..1164147 | - | 165 | WP_162849007.1 | hypothetical protein | - |
| XFGV230_RS04930 () | 1164174..1164596 | - | 423 | WP_012382587.1 | hypothetical protein | - |
| XFGV230_RS04935 () | 1164593..1165030 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| XFGV230_RS04940 () | 1165040..1166536 | - | 1497 | WP_038232978.1 | DUF3383 domain-containing protein | - |
| XFGV230_RS04945 () | 1166537..1167070 | - | 534 | WP_004090297.1 | hypothetical protein | - |
| XFGV230_RS04950 () | 1166994..1167374 | - | 381 | WP_174851815.1 | hypothetical protein | - |
| XFGV230_RS04955 () | 1167349..1167828 | - | 480 | WP_004090295.1 | hypothetical protein | - |
| XFGV230_RS04960 () | 1167825..1168193 | - | 369 | WP_004090294.1 | DUF4054 domain-containing protein | - |
| XFGV230_RS04965 () | 1168193..1168546 | - | 354 | WP_011097882.1 | hypothetical protein | - |
| XFGV230_RS04970 () | 1168610..1169593 | - | 984 | WP_004090291.1 | DUF2184 domain-containing protein | - |
| XFGV230_RS04975 () | 1169603..1170085 | - | 483 | WP_004090290.1 | hypothetical protein | - |
| XFGV230_RS04980 () | 1170095..1171303 | - | 1209 | WP_004090289.1 | DUF2213 domain-containing protein | - |
| XFGV230_RS04985 () | 1171303..1172148 | - | 846 | WP_004090288.1 | phage head morphogenesis protein | - |
| XFGV230_RS04990 () | 1172217..1172555 | + | 339 | WP_011097884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFGV230_RS04995 () | 1172552..1172833 | + | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
| XFGV230_RS05000 () | 1172882..1174270 | - | 1389 | WP_178086806.1 | DUF1073 domain-containing protein | - |
| XFGV230_RS05005 () | 1174267..1175817 | - | 1551 | WP_004090279.1 | phage terminase large subunit | - |
| XFGV230_RS05010 () | 1175807..1176166 | - | 360 | WP_004090276.1 | hypothetical protein | - |
| XFGV230_RS05015 () | 1176258..1176494 | - | 237 | WP_038233055.1 | hypothetical protein | - |
| XFGV230_RS05020 () | 1176472..1176933 | - | 462 | WP_011097892.1 | hypothetical protein | - |
| XFGV230_RS05025 () | 1176923..1177252 | - | 330 | WP_011097893.1 | phage holin family protein | - |
| XFGV230_RS05030 () | 1177245..1177742 | - | 498 | WP_004089579.1 | lysozyme | - |
| XFGV230_RS05035 () | 1177946..1178284 | - | 339 | WP_004089578.1 | BrnA antitoxin family protein | - |
| XFGV230_RS05040 () | 1178271..1178537 | - | 267 | WP_004089577.1 | BrnT family toxin | - |
| XFGV230_RS05045 () | 1178726..1179424 | - | 699 | WP_011097895.1 | hypothetical protein | - |
| XFGV230_RS05050 () | 1179553..1180014 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| XFGV230_RS05055 () | 1180011..1180775 | - | 765 | WP_004090689.1 | hypothetical protein | - |
| XFGV230_RS05060 () | 1180681..1181568 | - | 888 | WP_012382597.1 | YdaU family protein | - |
| XFGV230_RS05065 () | 1181565..1182353 | - | 789 | WP_011097897.1 | Bro-N domain-containing protein | - |
| XFGV230_RS05070 () | 1182350..1182982 | - | 633 | WP_004088094.1 | Bro-N domain-containing protein | - |
| XFGV230_RS05075 () | 1182979..1183263 | - | 285 | WP_004088096.1 | hypothetical protein | - |
| XFGV230_RS05080 () | 1183260..1183508 | - | 249 | WP_011097898.1 | hypothetical protein | - |
| XFGV230_RS05085 () | 1183505..1183693 | - | 189 | WP_004088102.1 | hypothetical protein | - |
| XFGV230_RS05090 () | 1183721..1183912 | - | 192 | WP_004088104.1 | hypothetical protein | - |
| XFGV230_RS05095 () | 1184171..1184416 | - | 246 | WP_004088108.1 | hypothetical protein | - |
| XFGV230_RS05100 () | 1184501..1185175 | + | 675 | WP_004088110.1 | helix-turn-helix transcriptional regulator | - |
| XFGV230_RS05105 () | 1185226..1185837 | - | 612 | WP_004088112.1 | Fic/DOC family protein | Toxin Detail |
| XFGV230_RS05110 () | 1185834..1186022 | - | 189 | WP_004088114.1 | antitoxin VbhA family protein | Antitoxin Detail |
| XFGV230_RS05115 () | 1186414..1186950 | + | 537 | WP_038233020.1 | hypothetical protein | - |
| XFGV230_RS05120 () | 1186947..1187360 | + | 414 | WP_004088056.1 | DUF1566 domain-containing protein | - |
| XFGV230_RS05125 () | 1187357..1187758 | + | 402 | WP_004088054.1 | hypothetical protein | - |
| XFGV230_RS05130 () | 1187755..1187904 | + | 150 | WP_012382602.1 | hypothetical protein | - |
| XFGV230_RS05135 () | 1187990..1188268 | + | 279 | WP_004088050.1 | hypothetical protein | - |
| XFGV230_RS05140 () | 1188291..1188482 | + | 192 | WP_012382603.1 | hypothetical protein | - |
| XFGV230_RS05145 () | 1188503..1188847 | + | 345 | WP_004088346.1 | hypothetical protein | - |
| XFGV230_RS05150 () | 1188887..1189708 | + | 822 | WP_004088345.1 | DUF2303 family protein | - |
| XFGV230_RS05155 () | 1189724..1190650 | + | 927 | WP_004088344.1 | phage recombination protein Bet | - |
| XFGV230_RS05160 () | 1190647..1192299 | + | 1653 | WP_004088343.1 | YqaJ viral recombinase family protein | - |
| XFGV230_RS05165 () | 1192328..1193092 | + | 765 | WP_011097903.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| XFGV230_RS05170 () | 1193086..1193349 | + | 264 | Protein_1001 | hypothetical protein | - |
| XFGV230_RS05175 () | 1193353..1193973 | + | 621 | WP_004088341.1 | Bro-N domain-containing protein | - |
| XFGV230_RS05180 () | 1194040..1194486 | + | 447 | WP_004088340.1 | single-stranded DNA-binding protein | - |
| XFGV230_RS05185 () | 1194505..1194753 | + | 249 | WP_011097904.1 | DUF4224 domain-containing protein | - |
| XFGV230_RS05190 () | 1194753..1195772 | + | 1020 | WP_011097905.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFGV230_RS05195 () | 1195914..1196963 | + | 1050 | WP_012382604.1 | two-component sensor histidine kinase | - |
| XFGV230_RS05200 () | 1196956..1198383 | + | 1428 | WP_004572832.1 | nitrogen regulation protein NR(I) | - |
| XFGV230_RS05205 () | 1198445..1199221 | - | 777 | Protein_1008 | Tn3 family transposase | - |
| XFGV230_RS05210 () | 1199207..1200211 | + | 1005 | Protein_1009 | DNA topoisomerase III | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|