MGE detailed information
MGE type: Prophage MGE length: 60378 bp
Accession: NZ_CP060141 Location: 1604208..1664585 Organism: Staphylococcus aureus strain 2868B2 Replicon: chromosome
Accession: NZ_CP060141 Location: 1604208..1664585 Organism: Staphylococcus aureus strain 2868B2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5U44_RS07910 () | 1599338..1600054 | - | 717 | WP_000688498.1 | LytTR family DNA-binding domain-containing protein | - |
| H5U44_RS07915 () | 1600073..1601356 | - | 1284 | WP_113558315.1 | sensor histidine kinase | - |
| H5U44_RS07920 () | 1601386..1601529 | - | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| H5U44_RS07925 () | 1601532..1602095 | - | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| H5U44_RS07930 () | 1602385..1602465 | + | 81 | WP_000046022.1 | delta-hemolysin | - |
| H5U44_RS07935 () | 1603062..1603847 | - | 786 | WP_000867940.1 | carbon-nitrogen family hydrolase | - |
| H5U44_RS07940 () | 1604208..1604834 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| H5U44_RS07945 () | 1605031..1606290 | + | 1260 | WP_031588341.1 | hypothetical protein | VF |
| H5U44_RS07950 () | 1606315..1607058 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| H5U44_RS07955 () | 1607233..1607517 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| H5U44_RS07960 () | 1607593..1609209 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| H5U44_RS07965 () | 1609304..1609850 | - | 547 | Protein_1557 | site-specific integrase | - |
| H5U44_RS07970 () | 1609911..1610123 | + | 213 | WP_000128898.1 | hypothetical protein | - |
| H5U44_RS07975 () | 1610120..1610710 | + | 591 | WP_001293059.1 | terminase small subunit | - |
| H5U44_RS07980 () | 1611027..1611463 | + | 437 | Protein_1560 | hypothetical protein | - |
| H5U44_RS07985 () | 1611569..1612012 | + | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| H5U44_RS07990 () | 1612866..1614173 | - | 1308 | WP_001045078.1 | TrkH family potassium uptake protein | - |
| H5U44_RS07995 () | 1614334..1615245 | + | 912 | WP_031590780.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| H5U44_RS08000 () | 1615307..1616151 | + | 845 | Protein_1564 | class I SAM-dependent methyltransferase | - |
| H5U44_RS08005 () | 1616523..1617746 | - | 1224 | WP_000206640.1 | ArgE/DapE family deacylase | - |
| H5U44_RS08010 () | 1618181..1619236 | + | 1056 | WP_031588767.1 | putative leukocidin-like protein 2 | VF |
| H5U44_RS08015 () | 1619258..1620313 | + | 1056 | WP_050439884.1 | putative leukocidin-like protein 1 | VF |
| H5U44_RS08020 () | 1620512..1621336 | - | 825 | WP_000283440.1 | Phospholipase C | VF |
| H5U44_RS08025 () | 1621393..1622430 | - | 1038 | WP_000857172.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H5U44_RS08030 () | 1622592..1622885 | - | 294 | WP_224397069.1 | hypothetical protein | - |
| H5U44_RS08035 () | 1622931..1623296 | - | 366 | WP_000440839.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| H5U44_RS08040 () | 1623636..1623803 | - | 168 | WP_001166555.1 | hypothetical protein | - |
| H5U44_RS08045 () | 1623902..1624255 | - | 354 | WP_000528938.1 | hypothetical protein | - |
| H5U44_RS08050 () | 1624576..1625460 | - | 885 | WP_001025527.1 | hypothetical protein | - |
| H5U44_RS08055 () | 1625529..1625975 | - | 447 | WP_001226135.1 | hypothetical protein | - |
| H5U44_RS08060 () | 1625992..1626453 | - | 462 | WP_000525014.1 | hypothetical protein | Toxin Detail |
| H5U44_RS08065 () | 1626466..1626789 | - | 324 | WP_001260487.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| H5U44_RS08070 () | 1626953..1627201 | + | 249 | WP_000272856.1 | helix-turn-helix transcriptional regulator | - |
| H5U44_RS08075 () | 1627214..1627657 | + | 444 | WP_000435352.1 | hypothetical protein | - |
| H5U44_RS08080 () | 1627672..1627821 | + | 150 | WP_000771849.1 | hypothetical protein | - |
| H5U44_RS08085 () | 1627862..1628074 | - | 213 | WP_000362645.1 | hypothetical protein | - |
| H5U44_RS08090 () | 1628143..1628340 | + | 198 | WP_031838117.1 | hypothetical protein | - |
| H5U44_RS08095 () | 1628327..1628549 | - | 223 | Protein_1583 | hypothetical protein | - |
| H5U44_RS08100 () | 1628616..1628759 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| H5U44_RS08105 () | 1628910..1629230 | + | 321 | WP_001120202.1 | DUF771 domain-containing protein | - |
| H5U44_RS08110 () | 1629227..1629388 | + | 162 | WP_001285953.1 | DUF1270 family protein | - |
| H5U44_RS08115 () | 1629487..1629747 | + | 261 | WP_000291082.1 | DUF1108 family protein | - |
| H5U44_RS08120 () | 1629755..1629991 | + | 237 | WP_000802314.1 | hypothetical protein | - |
| H5U44_RS08125 () | 1630014..1630625 | + | 612 | WP_001105358.1 | MBL fold metallo-hydrolase | - |
| H5U44_RS08130 () | 1630638..1630961 | + | 324 | WP_000171560.1 | hypothetical protein | - |
| H5U44_RS08135 () | 1630972..1631730 | + | 759 | WP_001003951.1 | DUF1351 domain-containing protein | - |
| H5U44_RS08140 () | 1631753..1632388 | + | 636 | WP_000184025.1 | hypothetical protein | - |
| H5U44_RS08145 () | 1632408..1634141 | + | 1734 | WP_001089592.1 | hypothetical protein | - |
| H5U44_RS08150 () | 1634181..1636019 | + | 1839 | WP_000144780.1 | DUF5906 domain-containing protein | - |
| H5U44_RS08155 () | 1636016..1636216 | + | 201 | WP_000123130.1 | hypothetical protein | - |
| H5U44_RS08160 () | 1636195..1636608 | + | 414 | WP_078056504.1 | helix-turn-helix transcriptional regulator | - |
| H5U44_RS08165 () | 1637077..1637262 | + | 186 | WP_001187247.1 | DUF3113 family protein | - |
| H5U44_RS08170 () | 1637263..1637622 | + | 360 | WP_000029396.1 | SA1788 family PVL leukocidin-associated protein | - |
| H5U44_RS08175 () | 1637623..1637871 | + | 249 | WP_001126847.1 | SAV1978 family virulence-associated passenger protein | - |
| H5U44_RS08180 () | 1637886..1638137 | + | 252 | WP_001065082.1 | DUF1024 family protein | - |
| H5U44_RS08185 () | 1638127..1638369 | + | 243 | WP_000066807.1 | hypothetical protein | - |
| H5U44_RS08190 () | 1638362..1638898 | + | 537 | Protein_1602 | dUTPase | - |
| H5U44_RS08195 () | 1638935..1639141 | + | 207 | WP_000195822.1 | DUF1381 domain-containing protein | - |
| H5U44_RS08200 () | 1639138..1639380 | + | 243 | WP_000141181.1 | hypothetical protein | - |
| H5U44_RS08205 () | 1639380..1639580 | + | 201 | WP_000264723.1 | DUF1514 family protein | - |
| H5U44_RS08210 () | 1639608..1640024 | + | 417 | WP_000590121.1 | hypothetical protein | - |
| H5U44_RS08215 () | 1640179..1640493 | + | 315 | WP_000160696.1 | HNH endonuclease | - |
| H5U44_RS08220 () | 1640620..1640925 | + | 306 | WP_000778931.1 | P27 family phage terminase small subunit | - |
| H5U44_RS08225 () | 1640915..1642606 | + | 1692 | WP_000153537.1 | terminase large subunit | - |
| H5U44_RS08230 () | 1642611..1643849 | + | 1239 | WP_001100667.1 | phage portal protein | - |
| H5U44_RS08235 () | 1643833..1644606 | + | 774 | WP_000061859.1 | Clp protease ClpP | - |
| H5U44_RS08240 () | 1644618..1645781 | + | 1164 | WP_012840526.1 | phage major capsid protein | - |
| H5U44_RS08245 () | 1645850..1646128 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| H5U44_RS08250 () | 1646140..1646472 | + | 333 | WP_000395500.1 | hypothetical protein | - |
| H5U44_RS08255 () | 1646469..1646870 | + | 402 | WP_000110016.1 | hypothetical protein | - |
| H5U44_RS08260 () | 1646871..1647266 | + | 396 | WP_001023810.1 | DUF3168 domain-containing protein | - |
| H5U44_RS08265 () | 1647301..1647942 | + | 642 | WP_000807543.1 | phage tail protein | - |
| H5U44_RS08270 () | 1648034..1648489 | + | 456 | WP_000169126.1 | Ig-like domain-containing protein | - |
| H5U44_RS08275 () | 1648547..1648897 | + | 351 | WP_000589169.1 | hypothetical protein | - |
| H5U44_RS08280 () | 1648939..1649097 | + | 159 | WP_012840525.1 | hypothetical protein | - |
| H5U44_RS08285 () | 1649111..1655288 | + | 6178 | Protein_1621 | phage tail tape measure protein | - |
| H5U44_RS08290 () | 1655288..1656112 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| H5U44_RS08295 () | 1656121..1657706 | + | 1586 | Protein_1623 | prophage endopeptidase tail family protein | - |
| H5U44_RS08300 () | 1657706..1657996 | + | 291 | WP_000179860.1 | hypothetical protein | - |
| H5U44_RS08305 () | 1658012..1659922 | + | 1911 | WP_000429548.1 | hypothetical protein | - |
| H5U44_RS08310 () | 1659922..1661388 | + | 1467 | WP_000067150.1 | BppU family phage baseplate upper protein | - |
| H5U44_RS08315 () | 1661388..1661777 | + | 390 | WP_001166602.1 | DUF2977 domain-containing protein | - |
| H5U44_RS08320 () | 1661770..1661934 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| H5U44_RS08325 () | 1661980..1662279 | + | 300 | WP_000466781.1 | DUF2951 family protein | - |
| H5U44_RS08330 () | 1662513..1662620 | + | 108 | WP_000253687.1 | putative holin-like toxin | Toxin Detail |
| - | 1662645..1662769 | - | 125 | - | - | Antitoxin Detail |
| H5U44_RS08340 () | 1662818..1663120 | + | 303 | WP_000387655.1 | phage holin | Toxin Detail |
| H5U44_RS08345 () | 1663131..1664585 | + | 1455 | WP_000930251.1 | N-acetylmuramoyl-L-alanine amidase | - |
| H5U44_RS08350 () | 1664930..1665478 | + | 549 | WP_240140516.1 | CPBP family intramembrane metalloprotease | - |
| H5U44_RS08355 () | 1665748..1665849 | + | 102 | Protein_1635 | hypothetical protein | - |
| H5U44_RS08360 () | 1666347..1667300 | + | 954 | WP_000766912.1 | ornithine cyclodeaminase family protein | - |
| H5U44_RS08365 () | 1667963..1668160 | - | 198 | WP_000239609.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|