MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99130 bp
Accession: NZ_CP059993 Location: 1..99130 Organism: Xanthomonas citri strain T4 Replicon: plasmid pT4p1
Accession: NZ_CP059993 Location: 1..99130 Organism: Xanthomonas citri strain T4 Replicon: plasmid pT4p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS93_RS22215 (HZS93_06002) | 744..1373 | - | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| HZS93_RS22220 (HZS93_06003) | 1553..1804 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| HZS93_RS22225 (HZS93_06004) | 1801..2196 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| HZS93_RS24560 | 2208..2324 | + | 117 | Protein_4 | transposase | - |
| HZS93_RS22230 (HZS93_06006) | 2357..2734 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| HZS93_RS22235 | 2793..3038 | - | 246 | Protein_6 | IS3 family transposase ISStma14 | Transposase |
| HZS93_RS22240 (HZS93_06008) | 3178..3473 | + | 296 | Protein_7 | transposase | - |
| HZS93_RS22245 | 3565..3738 | - | 174 | Protein_8 | hypothetical protein | - |
| HZS93_RS22250 (HZS93_06009) | 3738..4133 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| HZS93_RS22255 (HZS93_06010) | 4481..4927 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| HZS93_RS22260 (HZS93_06011) | 4924..5633 | + | 710 | Protein_11 | StbB family protein | - |
| HZS93_RS22265 (HZS93_06012) | 5682..6035 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| HZS93_RS22270 (HZS93_06013) | 6430..6639 | - | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| HZS93_RS22275 (HZS93_06014) | 6636..6944 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| HZS93_RS22280 (HZS93_06015) | 7400..8026 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| HZS93_RS22285 (HZS93_06016) | 8023..8346 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| HZS93_RS22290 (HZS93_06017) | 8491..8805 | + | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| HZS93_RS22295 (HZS93_06018) | 9053..10273 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| HZS93_RS22300 (HZS93_06020) | 10639..14526 | - | 3888 | WP_075150221.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS93_RS22305 | 14772..14993 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| HZS93_RS22310 (HZS93_06024) | 15283..15819 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| HZS93_RS22315 (HZS93_06025) | 15809..16021 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| HZS93_RS22320 | 16018..16269 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| HZS93_RS22325 (HZS93_06026) | 16292..16624 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HZS93_RS22330 (HZS93_06027) | 16624..16881 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| HZS93_RS22335 (HZS93_06028) | 17087..17689 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| HZS93_RS22340 (HZS93_06029) | 17673..17977 | + | 305 | Protein_27 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| HZS93_RS22345 (HZS93_06030) | 18144..18302 | - | 159 | WP_011052952.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| HZS93_RS22350 (HZS93_06031) | 18395..18964 | - | 570 | Protein_29 | UPF0149 family protein | - |
| HZS93_RS22355 (HZS93_06032) | 18983..20197 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| HZS93_RS22360 | 20313..20453 | - | 141 | Protein_31 | UPF0149 family protein | - |
| HZS93_RS22365 (HZS93_06034) | 20472..23447 | - | 2976 | Protein_32 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS93_RS22370 (HZS93_06035) | 23452..23871 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS93_RS22375 (HZS93_06036) | 23871..24110 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS93_RS22380 (HZS93_06037) | 24324..25247 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS93_RS22385 | 25291..25473 | + | 183 | Protein_36 | helix-turn-helix domain-containing protein | - |
| HZS93_RS22390 (HZS93_06039) | 25604..26020 | - | 417 | WP_087962480.1 | transposase | - |
| HZS93_RS22395 (HZS93_06040) | 26074..26280 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| HZS93_RS22400 (HZS93_06041) | 26330..26659 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| HZS93_RS22405 (HZS93_06042) | 26806..27405 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| HZS93_RS22410 (HZS93_06043) | 27732..28181 | + | 450 | WP_015462602.1 | hypothetical protein | - |
| HZS93_RS22415 (HZS93_06044) | 28178..28783 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| HZS93_RS22420 (HZS93_06045) | 28780..29274 | + | 495 | Protein_43 | hypothetical protein | - |
| HZS93_RS22425 (HZS93_06046) | 29402..29746 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| HZS93_RS22430 (HZS93_06047) | 29789..31066 | - | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| HZS93_RS22435 (HZS93_06048) | 31199..34189 | - | 2991 | WP_011052967.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| HZS93_RS22440 (HZS93_06049) | 34197..35471 | - | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| HZS93_RS22445 (HZS93_06050) | 35663..36718 | + | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| HZS93_RS22450 (HZS93_06052) | 36851..37927 | + | 1077 | WP_040107542.1 | XopE/AvrPphe family type III secretion system effector | - |
| HZS93_RS22460 (HZS93_06060) | 40485..43775 | + | 3291 | WP_219874852.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS93_RS22465 (HZS93_06061) | 43894..44817 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS93_RS22470 (HZS93_06062) | 45031..45270 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS93_RS22475 (HZS93_06063) | 45270..45689 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS93_RS22480 (HZS93_06064) | 45694..48636 | + | 2943 | Protein_55 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS93_RS22485 (HZS93_06065) | 48638..49132 | + | 495 | Protein_56 | UPF0149 family protein | - |
| HZS93_RS22490 (HZS93_06066) | 49177..49308 | + | 132 | Protein_57 | IS3 family transposase | - |
| HZS93_RS22495 (HZS93_06067) | 49422..52913 | - | 3492 | WP_011053008.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS93_RS22500 (HZS93_06071) | 54467..55055 | + | 589 | Protein_59 | IS3 family transposase ISXac3 | Transposase |
| HZS93_RS22505 (HZS93_06072) | 55086..55658 | - | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| HZS93_RS22510 (HZS93_06074) | 55849..56109 | + | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HZS93_RS22515 (HZS93_06075) | 56106..56507 | + | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZS93_RS22520 (HZS93_06076) | 56532..56795 | + | 264 | WP_005917846.1 | hypothetical protein | - |
| HZS93_RS22525 (HZS93_06077) | 56802..57989 | + | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| HZS93_RS22530 (HZS93_06078) | 58269..59495 | + | 1227 | WP_015472949.1 | replication protein RepA | - |
| HZS93_RS22535 (HZS93_06080) | 60300..61067 | + | 768 | WP_011052998.1 | ParA family protein | - |
| HZS93_RS22540 (HZS93_06081) | 61081..62112 | + | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| HZS93_RS22545 (HZS93_06082) | 62164..62493 | + | 330 | WP_011052996.1 | TrfB-related DNA-binding protein | - |
| HZS93_RS22550 (HZS93_06083) | 62497..62733 | + | 237 | WP_015462622.1 | Wgr family protein | - |
| HZS93_RS22555 (HZS93_06084) | 62848..63934 | + | 1087 | Protein_70 | IS3 family transposase ISXac2 | Transposase |
| HZS93_RS22560 | 64099..64314 | - | 216 | WP_155400515.1 | hypothetical protein | - |
| HZS93_RS22565 (HZS93_06086) | 64627..64917 | + | 291 | WP_003490957.1 | hypothetical protein | - |
| HZS93_RS22570 (HZS93_06087) | 64938..65315 | + | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| HZS93_RS22575 (HZS93_06088) | 65312..65611 | + | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| HZS93_RS22580 (HZS93_06089) | 65634..68267 | + | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| HZS93_RS22585 (HZS93_06090) | 68264..68932 | + | 669 | WP_015462618.1 | type IV secretion system protein | - |
| HZS93_RS22590 (HZS93_06091) | 68980..69192 | + | 213 | WP_015462617.1 | hypothetical protein | - |
| HZS93_RS22595 (HZS93_06092) | 69185..69565 | + | 381 | WP_015462616.1 | hypothetical protein | - |
| HZS93_RS22600 (HZS93_06093) | 69567..70433 | + | 867 | WP_011052987.1 | type IV secretion system protein | - |
| HZS93_RS22605 (HZS93_06094) | 70430..71104 | + | 675 | WP_011052986.1 | type IV secretion system protein | - |
| HZS93_RS22610 (HZS93_06095) | 71129..71911 | + | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| HZS93_RS22615 (HZS93_06096) | 71913..73133 | + | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| HZS93_RS22620 (HZS93_06097) | 73144..74166 | + | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| HZS93_RS22625 (HZS93_06098) | 74177..75055 | + | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| HZS93_RS22630 (HZS93_06099) | 75181..75600 | + | 420 | WP_011052981.1 | hypothetical protein | - |
| HZS93_RS22635 (HZS93_06100) | 75677..76063 | + | 387 | WP_003491149.1 | hypothetical protein | - |
| HZS93_RS22640 (HZS93_06101) | 76248..76418 | + | 171 | WP_017157755.1 | antitoxin MazE family protein | Antitoxin Detail |
| HZS93_RS22645 (HZS93_06102) | 76415..76741 | + | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HZS93_RS22650 (HZS93_06103) | 76795..79770 | - | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| HZS93_RS22655 (HZS93_06104) | 79784..81358 | - | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| HZS93_RS22660 (HZS93_06105) | 81617..81958 | - | 342 | WP_031425612.1 | hypothetical protein | - |
| HZS93_RS22665 (HZS93_06106) | 82157..82612 | - | 456 | WP_011052975.1 | hypothetical protein | - |
| HZS93_RS22670 (HZS93_06108) | 82825..83120 | + | 296 | Protein_93 | transposase | - |
| HZS93_RS22675 | 83212..83385 | - | 174 | Protein_94 | hypothetical protein | - |
| HZS93_RS22680 (HZS93_06109) | 83385..83780 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| HZS93_RS22685 (HZS93_06110) | 84128..84574 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| HZS93_RS22690 (HZS93_06111) | 84571..85280 | + | 710 | Protein_97 | StbB family protein | - |
| HZS93_RS22695 (HZS93_06112) | 85329..85682 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| HZS93_RS22700 (HZS93_06113) | 86077..86286 | - | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| HZS93_RS22705 (HZS93_06114) | 86283..86591 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| HZS93_RS22710 (HZS93_06115) | 87047..87673 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| HZS93_RS22715 (HZS93_06116) | 87670..87993 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| HZS93_RS22720 (HZS93_06117) | 88138..88452 | + | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| HZS93_RS22725 (HZS93_06118) | 88700..89920 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| HZS93_RS22730 (HZS93_06120) | 90286..93576 | - | 3291 | WP_219874850.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS93_RS22735 (HZS93_06122) | 94830..95066 | - | 237 | WP_015463816.1 | plasmid partition protein ParG | - |
| HZS93_RS22740 (HZS93_06123) | 95063..95692 | - | 630 | WP_015463817.1 | ParA family partition ATPase | - |
| HZS93_RS22745 (HZS93_06124) | 95775..96512 | - | 738 | WP_011052960.1 | DNA-binding protein | - |
| HZS93_RS22750 (HZS93_06125) | 97147..97968 | - | 822 | WP_011052929.1 | hypothetical protein | - |
| HZS93_RS22755 (HZS93_06126) | 98608..98772 | + | 165 | WP_155400514.1 | hypothetical protein | - |
| HZS93_RS22210 (HZS93_06133) | 98821..99130 | + | 310 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|