MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 133615 bp
Accession: NZ_CP059837 Location: 1..133615 Organism: Escherichia coli strain tcmA_3 Replicon: plasmid pCTX_A3_3
Accession: NZ_CP059837 Location: 1..133615 Organism: Escherichia coli strain tcmA_3 Replicon: plasmid pCTX_A3_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQF93_RS26220 (184) | 184..519 | + | 336 | WP_000157098.1 | hypothetical protein | - |
| GQF93_RS26225 (604) | 604..1452 | - | 849 | WP_073546709.1 | DUF4942 domain-containing protein | - |
| GQF93_RS26235 (2032) | 2032..2283 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| GQF93_RS26240 (2314) | 2314..2484 | - | 171 | WP_000150325.1 | hypothetical protein | - |
| GQF93_RS26245 (2546) | 2546..3487 | - | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| GQF93_RS26250 (3552) | 3552..3818 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| GQF93_RS26255 (3910) | 3910..4344 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| GQF93_RS26260 (5073) | 5073..5573 | - | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| GQF93_RS26265 (6036) | 6036..6632 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| GQF93_RS26270 (6629) | 6629..7348 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| GQF93_RS26275 (7345) | 7345..7779 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| GQF93_RS26280 (7834) | 7834..9792 | - | 1959 | WP_073546710.1 | ParB/RepB/Spo0J family partition protein | - |
| GQF93_RS26285 (9851) | 9851..10084 | - | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| GQF93_RS26290 (10142) | 10142..10669 | - | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| GQF93_RS28145 (10871) | 10871..11248 | + | 378 | WP_024126038.1 | hypothetical protein | - |
| GQF93_RS26305 (11439) | 11439..11630 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| GQF93_RS26310 (11627) | 11627..12049 | - | 423 | WP_000271729.1 | DUF1380 family protein | - |
| GQF93_RS26315 (12096) | 12096..12521 | - | 426 | WP_001198886.1 | antirestriction protein | - |
| GQF93_RS26320 (12939) | 12939..13709 | - | 771 | WP_001044393.1 | hypothetical protein | - |
| GQF93_RS26325 (13760) | 13760..14246 | - | 487 | Protein_19 | DUF1380 family protein | - |
| GQF93_RS26330 (14206) | 14206..14427 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| GQF93_RS26335 (14428) | 14428..15111 | - | 684 | WP_000086178.1 | DNA methylase | - |
| GQF93_RS26340 (15188) | 15188..15499 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| GQF93_RS26345 (15496) | 15496..16398 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| GQF93_RS26350 (16816) | 16816..17064 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| GQF93_RS26355 (17061) | 17061..17498 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GQF93_RS26360 (17498) | 17498..18772 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| GQF93_RS26365 (18774) | 18774..19190 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| GQF93_RS26370 (19183) | 19183..20163 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| GQF93_RS26375 (20577) | 20577..20885 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| GQF93_RS26380 (20972) | 20972..21616 | - | 645 | WP_001144036.1 | ParA family protein | - |
| GQF93_RS26385 (21796) | 21796..22575 | - | 780 | WP_021537353.1 | site-specific integrase | - |
| GQF93_RS26390 (22577) | 22577..22990 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| GQF93_RS26395 (23670) | 23670..24617 | + | 948 | WP_212487687.1 | nucleotidyltransferase | - |
| GQF93_RS26400 (24651) | 24651..25355 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| GQF93_RS26405 (25418) | 25418..26449 | - | 1032 | Protein_35 | TonB-dependent receptor | - |
| GQF93_RS26410 (26506) | 26506..27474 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| GQF93_RS26415 (27509) | 27509..28384 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| GQF93_RS26420 (28634) | 28634..28825 | - | 192 | Protein_38 | IS1380 family transposase | - |
| GQF93_RS26425 (28889) | 28889..29515 | - | 627 | WP_000434930.1 | hypothetical protein | - |
| GQF93_RS26430 (29515) | 29515..30558 | - | 1044 | WP_233109065.1 | ATP-dependent RecD-like DNA helicase | - |
| GQF93_RS26435 (30564) | 30564..31268 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| GQF93_RS26440 (31654) | 31654..32070 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| GQF93_RS26445 (32075) | 32075..32593 | - | 519 | WP_014839979.1 | FidL-like protein | - |
| GQF93_RS26450 (32593) | 32593..33381 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| GQF93_RS26455 (33401) | 33401..33649 | - | 249 | Protein_45 | TetR/AcrR family transcriptional regulator | - |
| GQF93_RS26460 (33703) | 33703..34407 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| GQF93_RS26465 (34398) | 34398..35309 | + | 912 | WP_233109064.1 | S-4TM family putative pore-forming effector | - |
| GQF93_RS26470 (35607) | 35607..36695 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| GQF93_RS26475 (36697) | 36697..37566 | + | 870 | WP_000253407.1 | hypothetical protein | - |
| GQF93_RS26480 (37623) | 37623..39188 | - | 1566 | WP_000741348.1 | AAA family ATPase | - |
| GQF93_RS26485 (39496) | 39496..39726 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| GQF93_RS26490 (39723) | 39723..40139 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GQF93_RS26495 (40301) | 40301..42439 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| GQF93_RS26500 (42793) | 42793..43050 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| GQF93_RS26505 (43050) | 43050..43640 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| GQF93_RS26510 (43903) | 43903..45459 | + | 1557 | WP_024126035.1 | AAA family ATPase | - |
| GQF93_RS26515 (45650) | 45650..46267 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| GQF93_RS26520 (46560) | 46560..47597 | - | 1038 | WP_044502555.1 | permease | - |
| GQF93_RS26525 (47702) | 47702..48025 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GQF93_RS26530 (48186) | 48186..48836 | + | 651 | WP_001360294.1 | arsenical resistance protein ArsH | - |
| GQF93_RS26535 (48845) | 48845..49390 | + | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| GQF93_RS26540 (49466) | 49466..49828 | + | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| GQF93_RS26545 (49849) | 49849..51606 | + | 1758 | WP_011117602.1 | Arsenical pump-driving ATPase | VF |
| GQF93_RS26550 (51680) | 51680..52048 | - | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| GQF93_RS26555 (52111) | 52111..52923 | - | 813 | WP_011117600.1 | sulfite exporter TauE/SafE family protein | - |
| GQF93_RS26560 (53135) | 53135..53671 | + | 537 | WP_011117599.1 | L-amino acid N-acyltransferase MnaT | VF |
| GQF93_RS26565 (53706) | 53706..54131 | - | 426 | WP_011117598.1 | glutaredoxin-dependent arsenate reductase | - |
| GQF93_RS26570 (54144) | 54144..54737 | - | 594 | Protein_68 | arsenite efflux transporter membrane subunit ArsB | - |
| GQF93_RS26575 (54771) | 54771..57293 | - | 2523 | Protein_69 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| GQF93_RS26580 (57345) | 57345..58049 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| GQF93_RS26585 (58113) | 58113..58253 | - | 141 | Protein_71 | transcriptional regulator | - |
| GQF93_RS26590 (58358) | 58358..59792 | + | 1435 | Protein_72 | glutathione synthase | - |
| GQF93_RS26595 (60192) | 60192..60995 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GQF93_RS26600 (60995) | 60995..61831 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| GQF93_RS28150 (61917) | 61917..62030 | - | 114 | Protein_75 | hypothetical protein | - |
| GQF93_RS26605 (62167) | 62167..62982 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GQF93_RS26610 (63276) | 63276..63980 | - | 705 | WP_212487689.1 | IS6-like element IS26 family transposase | - |
| GQF93_RS26615 (64566) | 64566..64910 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| GQF93_RS26620 (65086) | 65086..66087 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| GQF93_RS26625 (66439) | 66439..66693 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| GQF93_RS26630 (66693) | 66693..67283 | + | 591 | WP_000194550.1 | hypothetical protein | - |
| GQF93_RS26635 (67301) | 67301..67648 | - | 348 | WP_000142436.1 | DUF6404 family protein | - |
| GQF93_RS26640 (67767) | 67767..68114 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| GQF93_RS26645 (68132) | 68132..70012 | - | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| GQF93_RS26650 (70291) | 70291..71637 | - | 1347 | WP_001132032.1 | protein YagA | - |
| GQF93_RS26655 (71991) | 71991..72593 | + | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| GQF93_RS26660 (72649) | 72649..73143 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| GQF93_RS26665 (73143) | 73143..73409 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| GQF93_RS26670 (73886) | 73886..74359 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| GQF93_RS26675 (74476) | 74476..75324 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| GQF93_RS26680 (75364) | 75364..75642 | - | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| GQF93_RS26685 (75642) | 75642..75911 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| GQF93_RS26690 (75966) | 75966..76124 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| GQF93_RS26695 (76820) | 76820..77851 | - | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| GQF93_RS26700 (78809) | 78809..79087 | + | 279 | WP_219065241.1 | ash family protein | - |
| GQF93_RS26705 (79005) | 79005..79292 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| GQF93_RS26710 (79734) | 79734..80267 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| GQF93_RS26715 (80521) | 80521..81204 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| GQF93_RS26720 (81218) | 81218..81784 | + | 567 | WP_000776428.1 | protein TraD | - |
| GQF93_RS26725 (82052) | 82052..82306 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| GQF93_RS26730 (82349) | 82349..82801 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| GQF93_RS26735 (83475) | 83475..84542 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| GQF93_RS26740 (84542) | 84542..84979 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| GQF93_RS26745 (84993) | 84993..86675 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| GQF93_RS26750 (86668) | 86668..87963 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| GQF93_RS26755 (87950) | 87950..88402 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| GQF93_RS26760 (88413) | 88413..89966 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| GQF93_RS26765 (89979) | 89979..91076 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| GQF93_RS26770 (91094) | 91094..91708 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| GQF93_RS26775 (91718) | 91718..92278 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| GQF93_RS26780 (92263) | 92263..92919 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| GQF93_RS26785 (92919) | 92919..94247 | + | 1329 | WP_060643486.1 | hypothetical protein | VF |
| GQF93_RS26795 (94741) | 94741..94989 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| GQF93_RS28155 (95694) | 95694..95978 | - | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| GQF93_RS26805 (95977) | 95977..97131 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| GQF93_RS26810 (97282) | 97282..98106 | + | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| GQF93_RS26815 (98192) | 98192..99394 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| GQF93_RS26820 (99454) | 99454..100038 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| GQF93_RS26825 (100433) | 100433..100891 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| GQF93_RS26830 (100888) | 100888..101706 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| GQF93_RS26835 (101703) | 101703..102851 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| GQF93_RS26840 (102848) | 102848..103138 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| GQF93_RS26845 (103153) | 103153..103704 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| GQF93_RS26850 (103794) | 103794..107561 | + | 3768 | WP_073546708.1 | DUF5710 domain-containing protein | - |
| GQF93_RS26855 (107579) | 107579..107926 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| GQF93_RS26860 (107923) | 107923..108615 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| GQF93_RS26865 (108626) | 108626..109609 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| GQF93_RS26870 (109612) | 109612..110901 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| GQF93_RS26875 (110901) | 110901..111605 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| GQF93_RS26880 (111605) | 111605..112132 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| GQF93_RS26885 (112183) | 112183..112587 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| GQF93_RS26890 (112651) | 112651..112839 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| GQF93_RS26895 (112823) | 112823..113623 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| GQF93_RS26900 (113713) | 113713..116757 | + | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| GQF93_RS26905 (116757) | 116757..117371 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| GQF93_RS26910 (117338) | 117338..118540 | + | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| GQF93_RS26915 (118569) | 118569..119153 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| GQF93_RS26920 (119250) | 119250..121418 | + | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| GQF93_RS26925 (121494) | 121494..122108 | + | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| GQF93_RS26930 (122206) | 122206..122415 | + | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| GQF93_RS26935 (122624) | 122624..122800 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - (123285) | 123285..123336 | + | 52 | NuclAT_2 | - | - |
| - (123285) | 123285..123336 | + | 52 | NuclAT_2 | - | - |
| - (123285) | 123285..123336 | + | 52 | NuclAT_2 | - | - |
| - (123285) | 123285..123336 | + | 52 | NuclAT_2 | - | - |
| GQF93_RS26940 (123723) | 123723..123974 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| GQF93_RS26945 (124046) | 124046..124198 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - (124248) | 124248..124310 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (124248) | 124248..124310 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (124248) | 124248..124310 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (124248) | 124248..124310 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| GQF93_RS26950 (124825) | 124825..125604 | + | 780 | WP_275450201.1 | protein FinQ | - |
| - (125671) | 125671..125731 | + | 61 | NuclAT_1 | - | - |
| - (125671) | 125671..125731 | + | 61 | NuclAT_1 | - | - |
| - (125671) | 125671..125731 | + | 61 | NuclAT_1 | - | - |
| - (125671) | 125671..125731 | + | 61 | NuclAT_1 | - | - |
| GQF93_RS26955 (125911) | 125911..127119 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| GQF93_RS26960 (127138) | 127138..128208 | + | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| GQF93_RS26965 (128201) | 128201..130492 | + | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| GQF93_RS26970 (130529) | 130529..133228 | - | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| GQF93_RS26975 (133239) | 133239..133571 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|