MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107388 bp
Accession: NZ_CP059053 Location: 1..107388 Organism: Pseudomonas putida strain BS3701 Replicon: plasmid pBS1141
Accession: NZ_CP059053 Location: 1..107388 Organism: Pseudomonas putida strain BS3701 Replicon: plasmid pBS1141
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0H12_RS28880 () | 663..1430 | + | 768 | WP_062378610.1 | ParA family protein | - |
| H0H12_RS28885 () | 1441..2385 | + | 945 | WP_011005971.1 | ParB/RepB/Spo0J family partition protein | - |
| H0H12_RS28890 () | 2382..2732 | + | 351 | WP_011005972.1 | KorA protein | - |
| H0H12_RS28895 () | 2729..3136 | + | 408 | WP_011005846.1 | hypothetical protein | - |
| H0H12_RS28900 () | 3419..4054 | + | 636 | WP_011005847.1 | recombinase family protein | - |
| H0H12_RS28905 () | 4512..5066 | + | 555 | WP_062378612.1 | hypothetical protein | - |
| H0H12_RS28910 () | 5095..5388 | + | 294 | WP_011005849.1 | hypothetical protein | - |
| H0H12_RS28915 () | 5378..5887 | + | 510 | WP_011005850.1 | hypothetical protein | - |
| H0H12_RS28920 () | 6061..7335 | + | 1275 | WP_180690182.1 | DUF1173 family protein | - |
| H0H12_RS28925 () | 7522..8091 | + | 570 | WP_062378623.1 | hypothetical protein | - |
| H0H12_RS28930 () | 8108..9394 | - | 1287 | WP_180690183.1 | Y-family DNA polymerase | - |
| H0H12_RS28935 () | 9384..9815 | - | 432 | WP_011005854.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H0H12_RS28940 () | 9953..10903 | + | 951 | WP_062378615.1 | non-homologous end-joining DNA ligase | - |
| H0H12_RS28945 () | 10934..11209 | + | 276 | WP_011005856.1 | hypothetical protein | - |
| H0H12_RS28950 () | 12578..12802 | - | 225 | WP_011005860.1 | hypothetical protein | - |
| H0H12_RS28955 () | 12843..13145 | - | 303 | WP_011005861.1 | putative addiction module antidote protein | Antitoxin Detail |
| H0H12_RS28960 () | 13142..13444 | - | 303 | WP_011005862.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H0H12_RS28965 () | 13646..14425 | + | 780 | WP_180690184.1 | DUF4942 domain-containing protein | - |
| H0H12_RS28970 () | 14579..14947 | + | 369 | WP_011005864.1 | hypothetical protein | - |
| H0H12_RS28975 () | 14980..15297 | + | 318 | WP_062378618.1 | hypothetical protein | - |
| H0H12_RS28980 () | 15353..15571 | + | 219 | WP_011005866.1 | hypothetical protein | - |
| H0H12_RS28985 () | 15710..16729 | + | 1020 | WP_062378625.1 | hypothetical protein | - |
| H0H12_RS28990 () | 16872..17114 | + | 243 | WP_011005868.1 | hypothetical protein | - |
| H0H12_RS28995 () | 17166..18848 | + | 1683 | WP_062378620.1 | DNA cytosine methyltransferase | - |
| H0H12_RS29000 () | 18939..19160 | + | 222 | WP_011005870.1 | hypothetical protein | - |
| H0H12_RS29005 () | 19164..19604 | + | 441 | WP_011005871.1 | hypothetical protein | - |
| H0H12_RS29010 () | 19701..20000 | + | 300 | WP_062378629.1 | hypothetical protein | - |
| H0H12_RS29015 () | 20671..21063 | + | 393 | WP_011005874.1 | regulatory protein RecX | - |
| H0H12_RS29020 () | 21088..21630 | + | 543 | WP_011005875.1 | single-stranded DNA-binding protein | - |
| H0H12_RS29025 () | 21651..21833 | + | 183 | WP_062378630.1 | hypothetical protein | - |
| H0H12_RS29030 () | 22071..22898 | + | 828 | WP_011005876.1 | DUF945 domain-containing protein | - |
| H0H12_RS29035 () | 22959..23390 | + | 432 | WP_011005877.1 | hypothetical protein | - |
| H0H12_RS29040 () | 23407..23721 | + | 315 | WP_011005878.1 | transcriptional regulator | - |
| H0H12_RS29045 () | 23740..23934 | + | 195 | WP_180690185.1 | hypothetical protein | - |
| H0H12_RS29050 () | 24195..24413 | - | 219 | Protein_34 | MFS transporter | - |
| H0H12_RS29055 () | 24534..25640 | - | 1107 | WP_062378590.1 | alkene reductase | - |
| H0H12_RS29060 () | 25877..26632 | - | 756 | WP_062378588.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| H0H12_RS29065 () | 26692..27180 | - | 489 | WP_180690186.1 | alpha/beta hydrolase | - |
| H0H12_RS29070 () | 27214..27372 | - | 159 | WP_180690187.1 | hypothetical protein | - |
| H0H12_RS29075 () | 27613..28593 | - | 981 | WP_062378634.1 | MBL fold metallo-hydrolase | - |
| H0H12_RS29085 () | 30060..30671 | + | 612 | Protein_41 | LysR family transcriptional regulator | - |
| H0H12_RS29090 () | 30930..32093 | + | 1164 | WP_180690188.1 | restriction endonuclease subunit M | - |
| H0H12_RS29095 () | 32217..32603 | + | 387 | WP_169838417.1 | hypothetical protein | - |
| H0H12_RS29100 () | 33086..33646 | + | 561 | WP_180690189.1 | hypothetical protein | - |
| H0H12_RS29105 () | 33637..34863 | + | 1227 | WP_169838415.1 | hypothetical protein | - |
| H0H12_RS29110 () | 35272..35679 | + | 408 | WP_084342291.1 | hypothetical protein | - |
| H0H12_RS29115 () | 35676..36935 | + | 1260 | WP_084342292.1 | integrase arm-type DNA-binding domain-containing protein | - |
| H0H12_RS29120 () | 37037..37513 | - | 477 | Protein_48 | hypothetical protein | - |
| H0H12_RS29125 () | 37598..37807 | - | 210 | WP_019694519.1 | hypothetical protein | - |
| H0H12_RS29130 () | 37926..38672 | - | 747 | WP_080690697.1 | hypothetical protein | - |
| H0H12_RS29135 () | 39055..40041 | + | 987 | WP_032489001.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| H0H12_RS29140 () | 40185..40499 | + | 315 | WP_011117470.1 | non-heme iron oxygenase ferredoxin subunit | - |
| H0H12_RS29145 () | 40570..41919 | + | 1350 | WP_011117400.1 | Rieske 2Fe-2S domain-containing protein | - |
| H0H12_RS29150 () | 41934..42518 | + | 585 | WP_011117401.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| H0H12_RS29155 () | 42587..43366 | + | 780 | WP_032489003.1 | 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | - |
| H0H12_RS29160 () | 43413..44864 | + | 1452 | WP_011117403.1 | aldehyde dehydrogenase | - |
| H0H12_RS29165 () | 44892..45800 | + | 909 | WP_011117404.1 | 1,2-dihydroxynaphthalene dioxygenase | - |
| H0H12_RS29170 () | 46056..46691 | + | 636 | WP_011117405.1 | outer membrane beta-barrel protein | - |
| H0H12_RS29175 () | 46740..47744 | + | 1005 | WP_011117406.1 | trans-o-hydroxybenzylidenepyruvate hydratase-aldolase | - |
| H0H12_RS29180 () | 47998..48597 | + | 600 | WP_011117407.1 | 2-hydroxychromene-2-carboxylate isomerase | - |
| H0H12_RS29185 () | 49007..49920 | - | 914 | Protein_61 | recombinase family protein | - |
| H0H12_RS29190 () | 50141..50500 | + | 360 | Protein_62 | transposase | - |
| H0H12_RS29195 () | 50756..51169 | - | 414 | WP_011154418.1 | helix-turn-helix transcriptional regulator | - |
| H0H12_RS29200 () | 51275..51892 | + | 618 | WP_011117411.1 | glutathione transferase GstA | - |
| H0H12_RS29205 () | 51904..52968 | + | 1065 | WP_011117412.1 | alkene reductase | - |
| H0H12_RS29210 () | 53352..54383 | + | 1032 | WP_011117413.1 | aldo/keto reductase | - |
| H0H12_RS29215 () | 54403..54777 | + | 375 | WP_180690169.1 | hypothetical protein | - |
| H0H12_RS29220 () | 54971..55708 | - | 738 | Protein_68 | helicase | - |
| H0H12_RS29225 () | 55698..55967 | - | 270 | Protein_69 | phage tail protein | - |
| H0H12_RS29230 () | 56101..57012 | - | 912 | WP_011117414.1 | SdiA-regulated domain-containing protein | - |
| H0H12_RS29235 () | 57059..57418 | - | 360 | WP_011117415.1 | TraR/DksA family transcriptional regulator | - |
| H0H12_RS29240 () | 57418..58161 | - | 744 | WP_031319755.1 | universal stress protein | - |
| H0H12_RS29245 () | 58484..59391 | - | 908 | Protein_73 | phage tail protein | - |
| H0H12_RS29250 () | 59572..60486 | - | 915 | WP_011117418.1 | transcriptional regulator GcvA | - |
| H0H12_RS29255 () | 60791..61564 | + | 774 | WP_011117419.1 | SDR family oxidoreductase | - |
| H0H12_RS29260 () | 61638..61916 | + | 279 | Protein_76 | hypothetical protein | - |
| H0H12_RS29265 () | 62056..62373 | + | 318 | WP_110389057.1 | OsmC family protein | - |
| H0H12_RS29270 () | 62265..62933 | - | 669 | WP_019694526.1 | DDE-type integrase/transposase/recombinase | - |
| H0H12_RS29275 () | 62930..63316 | - | 387 | WP_011154423.1 | transposase | - |
| H0H12_RS29280 () | 63386..63922 | - | 537 | Protein_80 | IS30 family transposase | - |
| H0H12_RS29285 () | 64143..65759 | - | 1617 | WP_011117423.1 | methyl-accepting chemotaxis protein | - |
| H0H12_RS29290 () | 65996..66187 | - | 192 | WP_011117424.1 | 2-hydroxymuconate tautomerase | - |
| H0H12_RS29295 () | 66242..67036 | - | 795 | WP_011117425.1 | 2-oxo-3-hexenedioate decarboxylase | - |
| H0H12_RS29300 () | 67033..68073 | - | 1041 | WP_011117426.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| H0H12_RS29305 () | 68085..69008 | - | 924 | WP_011117427.1 | acetaldehyde dehydrogenase (acetylating) | - |
| H0H12_RS29310 () | 69028..69813 | - | 786 | WP_011117428.1 | 2-oxopent-4-enoate hydratase | - |
| H0H12_RS29315 () | 69825..70706 | - | 882 | WP_180690170.1 | alpha/beta fold hydrolase | - |
| H0H12_RS29320 () | 70714..72174 | - | 1461 | WP_011117430.1 | 2-hydroxymuconic semialdehyde dehydrogenase | - |
| H0H12_RS29325 () | 72209..73132 | - | 924 | WP_011117431.1 | catechol 2,3-dioxygenase | - |
| H0H12_RS29330 () | 73153..73470 | - | 318 | WP_180690171.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| H0H12_RS29335 () | 73454..73672 | - | 219 | WP_024265233.1 | hypothetical protein | - |
| H0H12_RS29340 () | 73970..75274 | - | 1305 | WP_011154425.1 | salicylate 1-monooxygenase | - |
| H0H12_RS29345 () | 75318..75689 | - | 372 | WP_023294894.1 | hypothetical protein | - |
| H0H12_RS29350 () | 75686..76012 | - | 327 | WP_000091614.1 | hypothetical protein | - |
| H0H12_RS29355 () | 76036..76371 | - | 336 | WP_000741275.1 | hypothetical protein | - |
| H0H12_RS29360 () | 76386..76721 | - | 336 | WP_001172026.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| H0H12_RS29365 () | 76702..77079 | - | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H0H12_RS29370 () | 77271..77873 | + | 603 | WP_010465829.1 | recombinase family protein | - |
| H0H12_RS29375 () | 77857..80886 | + | 3030 | WP_010799689.1 | Tn3 family transposase | - |
| H0H12_RS29380 () | 81042..83369 | + | 2328 | WP_180690172.1 | EAL domain-containing protein | - |
| H0H12_RS29385 () | 83357..84214 | + | 858 | WP_180690173.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| H0H12_RS29390 () | 84517..86142 | + | 1626 | WP_180690174.1 | methyl-accepting chemotaxis protein | - |
| H0H12_RS29395 () | 86232..86480 | - | 249 | Protein_103 | hypothetical protein | - |
| H0H12_RS29400 () | 86480..86664 | - | 185 | Protein_104 | hypothetical protein | - |
| H0H12_RS29405 () | 86701..86982 | - | 282 | WP_180690175.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| H0H12_RS29410 () | 86969..87232 | - | 264 | WP_180690176.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| H0H12_RS29415 () | 87711..88046 | - | 336 | Protein_107 | transposase | - |
| H0H12_RS29420 () | 88052..88447 | - | 396 | WP_003159186.1 | type II toxin-antitoxin system VapC family toxin | - |
| H0H12_RS29425 () | 88444..88695 | - | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| H0H12_RS29430 () | 88877..89443 | + | 567 | WP_003159185.1 | recombinase family protein | - |
| H0H12_RS29435 () | 89572..90147 | + | 576 | WP_180690177.1 | recombinase family protein | - |
| H0H12_RS29440 () | 90128..91789 | + | 1662 | WP_180690178.1 | DDE-type integrase/transposase/recombinase | - |
| H0H12_RS29445 () | 91779..92750 | + | 972 | WP_180690179.1 | AAA family ATPase | - |
| H0H12_RS29450 () | 92899..95040 | + | 2142 | WP_180690180.1 | AAA family ATPase | - |
| H0H12_RS29455 () | 95154..95786 | - | 633 | WP_011005954.1 | hypothetical protein | - |
| H0H12_RS29460 () | 95800..96369 | - | 570 | WP_090315695.1 | phospholipase D family protein | - |
| H0H12_RS29465 () | 96392..96727 | - | 336 | WP_011005956.1 | hypothetical protein | - |
| H0H12_RS29470 () | 96756..97673 | - | 918 | WP_062378601.1 | lytic transglycosylase domain-containing protein | - |
| H0H12_RS29475 () | 97657..98688 | - | 1032 | WP_011005958.1 | P-type DNA transfer ATPase VirB11 | - |
| H0H12_RS29480 () | 98698..99963 | - | 1266 | WP_062378603.1 | TrbI/VirB10 family protein | - |
| H0H12_RS29485 () | 99966..100751 | - | 786 | WP_011005960.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| H0H12_RS29490 () | 100777..101442 | - | 666 | WP_062378604.1 | type IV secretion system protein | - |
| H0H12_RS29495 () | 101442..102305 | - | 864 | WP_011005962.1 | type IV secretion system protein | - |
| H0H12_RS29500 () | 102293..102685 | - | 393 | WP_180690181.1 | hypothetical protein | - |
| H0H12_RS29505 () | 102678..102890 | - | 213 | WP_011005964.1 | hypothetical protein | - |
| H0H12_RS29510 () | 102919..103608 | - | 690 | WP_180690190.1 | hypothetical protein | - |
| H0H12_RS29515 () | 103608..106292 | - | 2685 | WP_011005966.1 | mating pair formation protein | - |
| H0H12_RS29520 () | 106279..106575 | - | 297 | WP_011005967.1 | VirB3 family type IV secretion system protein | - |
| H0H12_RS29525 () | 106584..107045 | - | 462 | WP_011005968.1 | TrbC/VirB2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|