MGE detailed information
MGE type: Conjugative plasmid MGE length: 122379 bp
Accession: NZ_CP058575 Location: 1..122379 Organism: Escherichia coli strain EC1 Replicon: plasmid pEC1-1
Accession: NZ_CP058575 Location: 1..122379 Organism: Escherichia coli strain EC1 Replicon: plasmid pEC1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYH05_RS24490 () | 541..882 | - | 342 | Protein_1 | transposase | - |
| HYH05_RS24495 () | 834..1055 | - | 222 | WP_000080227.1 | hypothetical protein | - |
| HYH05_RS24500 () | 1086..1436 | - | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| HYH05_RS24505 () | 1433..1795 | - | 363 | WP_059330006.1 | IS66 family insertion sequence hypothetical protein | - |
| HYH05_RS24510 () | 1904..2601 | - | 698 | Protein_5 | IS1 family transposase IS1A | Transposase |
| HYH05_RS24515 () | 2634..3212 | + | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| HYH05_RS24520 () | 3625..3978 | - | 354 | WP_000005489.1 | hypothetical protein | - |
| HYH05_RS24525 () | 4450..5472 | - | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| HYH05_RS24530 () | 5877..6134 | + | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| HYH05_RS24535 () | 6369..6443 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HYH05_RS24540 () | 6436..7293 | + | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| HYH05_RS24545 () | 8237..8890 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HYH05_RS24550 () | 8985..9242 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HYH05_RS24555 () | 9175..9576 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HYH05_RS24560 () | 9861..11171 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| HYH05_RS24565 () | 11200..11298 | + | 99 | Protein_16 | IS1 family transposase | - |
| HYH05_RS24570 () | 11448..12308 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HYH05_RS24575 () | 12607..13311 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HYH05_RS24580 () | 13480..14340 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| HYH05_RS24585 () | 14483..15445 | + | 963 | Protein_20 | IS4 family transposase IS10R | Transposase |
| HYH05_RS24590 () | 15555..16049 | + | 495 | Protein_21 | IS4 family transposase IS10R | Transposase |
| HYH05_RS24595 () | 16103..16807 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HYH05_RS24600 () | 16871..17317 | + | 447 | Protein_23 | tunicamycin resistance protein | - |
| HYH05_RS24605 () | 17799..17990 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| HYH05_RS24610 () | 18014..18241 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| HYH05_RS24615 () | 18292..19428 | + | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| HYH05_RS24620 () | 19543..20905 | + | 1363 | Protein_27 | IS1182 family transposase ISCfr1 | Transposase |
| HYH05_RS24625 () | 20871..21575 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HYH05_RS24630 () | 21585..22268 | + | 684 | WP_175065871.1 | EamA family transporter | - |
| HYH05_RS24635 () | 22300..23499 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HYH05_RS24640 () | 23605..24231 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HYH05_RS24645 () | 24263..24499 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| HYH05_RS24650 () | 24553..25389 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| HYH05_RS24655 () | 25389..26192 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HYH05_RS24660 () | 26253..27068 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HYH05_RS24665 () | 27376..27588 | - | 213 | WP_024192851.1 | hypothetical protein | - |
| HYH05_RS24670 () | 27613..28317 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HYH05_RS24675 () | 28439..29344 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| HYH05_RS24680 () | 29341..30580 | + | 1240 | Protein_39 | MFS transporter | - |
| HYH05_RS24685 () | 30580..31164 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| HYH05_RS24690 () | 31688..32392 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HYH05_RS24695 () | 32456..32902 | + | 447 | Protein_42 | tunicamycin resistance protein | - |
| HYH05_RS24700 () | 33383..33574 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| HYH05_RS24705 () | 33598..33825 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| HYH05_RS24710 () | 33876..35012 | + | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| HYH05_RS24715 () | 35127..36489 | + | 1363 | Protein_46 | IS1182 family transposase ISCfr1 | Transposase |
| HYH05_RS24720 () | 36455..37159 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HYH05_RS24725 () | 37284..38306 | + | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| HYH05_RS24730 () | 38306..39085 | + | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| HYH05_RS24735 () | 39153..39761 | + | 609 | Protein_50 | IS66 family transposase ISEc22 | Transposase |
| HYH05_RS24740 () | 39824..40615 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| HYH05_RS24745 () | 40622..42592 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| HYH05_RS24750 () | 42874..43310 | + | 437 | Protein_53 | IS3 family transposase IS2 | Transposase |
| HYH05_RS24755 () | 43835..44107 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| HYH05_RS24760 () | 44553..44728 | + | 176 | Protein_55 | IS3 family transposase | - |
| HYH05_RS24765 () | 44954..46123 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| HYH05_RS24770 () | 46489..46677 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| HYH05_RS24775 () | 46798..47538 | + | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| HYH05_RS24780 () | 47781..48758 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| HYH05_RS24785 () | 49745..50065 | + | 321 | WP_001363097.1 | hypothetical protein | - |
| HYH05_RS24790 () | 50156..51501 | - | 1346 | Protein_61 | IS4 family transposase IS4 | Transposase |
| HYH05_RS24795 () | 51568..52011 | - | 444 | Protein_62 | hypothetical protein | - |
| HYH05_RS24800 () | 54330..54548 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HYH05_RS24805 () | 54550..54855 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HYH05_RS24810 () | 54856..55662 | + | 807 | WP_000016970.1 | site-specific integrase | - |
| HYH05_RS24815 () | 56383..57138 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HYH05_RS24820 () | 57726..58892 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HYH05_RS24825 () | 58892..59863 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HYH05_RS24830 () | 60601..61503 | + | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| HYH05_RS24835 () | 61507..61811 | + | 305 | Protein_70 | hypothetical protein | - |
| HYH05_RS24840 () | 61888..62571 | + | 684 | WP_040110341.1 | DNA methylase | - |
| HYH05_RS24845 () | 62572..62793 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| HYH05_RS24850 () | 62807..63241 | + | 435 | WP_001546462.1 | DUF1380 family protein | - |
| HYH05_RS24855 () | 63286..64056 | + | 771 | WP_001006251.1 | hypothetical protein | - |
| HYH05_RS24860 () | 64593..64895 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| HYH05_RS24865 () | 64942..65364 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| HYH05_RS24870 () | 65361..65552 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HYH05_RS24875 () | 65824..66072 | - | 249 | WP_071781657.1 | hypothetical protein | - |
| HYH05_RS24880 () | 66584..66814 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HYH05_RS24885 () | 66866..68227 | + | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| HYH05_RS24890 () | 68275..68840 | + | 566 | Protein_81 | class I SAM-dependent methyltransferase | - |
| HYH05_RS24895 () | 68866..69078 | + | 213 | WP_001348622.1 | hypothetical protein | - |
| HYH05_RS24900 () | 69488..69694 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| HYH05_RS24905 () | 69720..70259 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| HYH05_RS24910 () | 70327..70560 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| HYH05_RS24915 () | 70588..70785 | + | 198 | Protein_86 | hypothetical protein | - |
| HYH05_RS24920 () | 70840..71274 | + | 435 | WP_000845937.1 | conjugation system SOS inhibitor PsiB | - |
| HYH05_RS24925 () | 71271..71990 | + | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| HYH05_RS24930 () | 72002..72190 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 72002..72226 | + | 225 | NuclAT_0 | - | - |
| - () | 72002..72226 | + | 225 | NuclAT_0 | - | - |
| - () | 72002..72226 | + | 225 | NuclAT_0 | - | - |
| - () | 72002..72226 | + | 225 | NuclAT_0 | - | - |
| HYH05_RS24935 () | 72270..72428 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HYH05_RS24940 () | 73118..73324 | + | 207 | WP_000275857.1 | hypothetical protein | - |
| HYH05_RS24945 () | 73349..73636 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| HYH05_RS24950 () | 73753..74574 | + | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
| HYH05_RS24955 () | 74871..75473 | - | 603 | WP_013362798.1 | hypothetical protein | VF |
| HYH05_RS24960 () | 75794..76177 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| HYH05_RS24965 () | 76364..77053 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| HYH05_RS24970 () | 77152..77547 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| HYH05_RS24975 () | 77580..77945 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| HYH05_RS24980 () | 77960..78271 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HYH05_RS24985 () | 78461..79477 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| HYH05_RS24990 () | 79528..80058 | + | 531 | WP_001324649.1 | type IV conjugative transfer system protein TraE | - |
| HYH05_RS24995 () | 80069..80773 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HYH05_RS25000 () | 80773..82200 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| HYH05_RS25005 () | 82190..82780 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| HYH05_RS25010 () | 82734..82964 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| HYH05_RS25015 () | 82976..83227 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| HYH05_RS25020 () | 83224..83739 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HYH05_RS25025 () | 83874..84095 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| HYH05_RS25030 () | 84255..86882 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| HYH05_RS25035 () | 86879..87265 | + | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| HYH05_RS25040 () | 87262..87894 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HYH05_RS25045 () | 87891..88127 | + | 237 | Protein_112 | TraU family protein | - |
| HYH05_RS25050 () | 88184..89397 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| HYH05_RS25055 () | 89444..90196 | + | 753 | Protein_114 | conjugal transfer pilus assembly protein TraU | - |
| HYH05_RS25060 () | 90205..90843 | + | 639 | WP_021518374.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HYH05_RS25065 () | 90840..92648 | + | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HYH05_RS25070 () | 92675..92932 | + | 258 | WP_000864312.1 | conjugal transfer protein TrbE | - |
| HYH05_RS25075 () | 92925..93668 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HYH05_RS25080 () | 93682..94023 | + | 342 | WP_000556794.1 | conjugal transfer protein TrbA | - |
| HYH05_RS25085 () | 94004..94339 | - | 336 | WP_000415571.1 | hypothetical protein | - |
| HYH05_RS25090 () | 94420..94704 | + | 285 | WP_000624105.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HYH05_RS25095 () | 94691..95245 | + | 555 | WP_096949664.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HYH05_RS25100 () | 95175..95549 | + | 375 | WP_071788165.1 | P-type conjugative transfer protein TrbJ | - |
| HYH05_RS25105 () | 95503..95895 | + | 393 | WP_000164675.1 | F-type conjugal transfer protein TrbF | - |
| HYH05_RS25110 () | 95882..97255 | + | 1374 | WP_021518370.1 | conjugal transfer protein TraH | - |
| HYH05_RS25115 () | 97252..100077 | + | 2826 | WP_001553826.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HYH05_RS25120 () | 100074..100583 | + | 510 | WP_000628100.1 | conjugal transfer entry exclusion protein TraS | - |
| HYH05_RS25125 () | 100597..101328 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| HYH05_RS25130 () | 101580..103769 | + | 2190 | WP_040110343.1 | type IV conjugative transfer system coupling protein TraD | - |
| HYH05_RS25135 () | 103769..108888 | + | 5120 | Protein_130 | Multifunctional conjugation protein TraI | Relaxase |
| HYH05_RS25140 () | 108908..109654 | + | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
| HYH05_RS25145 () | 109709..110269 | + | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| HYH05_RS25150 () | 110403..110615 | + | 213 | WP_005012601.1 | hypothetical protein | - |
| HYH05_RS25155 () | 110916..111005 | - | 90 | Protein_134 | IS1 family transposase | - |
| HYH05_RS25160 () | 111060..111737 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| HYH05_RS25165 () | 111737..112084 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| HYH05_RS25170 () | 112104..113675 | + | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| HYH05_RS25175 () | 113713..114328 | - | 616 | Protein_138 | IS1-like element IS1A family transposase | - |
| HYH05_RS25180 () | 114429..114611 | + | 183 | WP_000968309.1 | hypothetical protein | - |
| - () | 114750..114811 | - | 62 | NuclAT_1 | - | - |
| - () | 114750..114811 | - | 62 | NuclAT_1 | - | - |
| - () | 114750..114811 | - | 62 | NuclAT_1 | - | - |
| - () | 114750..114811 | - | 62 | NuclAT_1 | - | - |
| HYH05_RS25185 () | 114798..115004 | + | 207 | WP_015387399.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HYH05_RS25190 () | 115288..115545 | + | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| HYH05_RS25195 () | 115781..115855 | + | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| HYH05_RS25200 () | 115848..116294 | + | 447 | Protein_143 | incFII family plasmid replication initiator RepA | - |
| HYH05_RS25205 () | 116240..116722 | - | 483 | Protein_144 | VENN motif pre-toxin domain-containing protein | - |
| HYH05_RS25210 () | 117614..118834 | + | 1221 | WP_000410951.1 | arginine deiminase | - |
| HYH05_RS25215 () | 118845..119756 | + | 912 | WP_000440183.1 | carbamate kinase | - |
| HYH05_RS25220 () | 119841..120845 | + | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| HYH05_RS25225 () | 120893..122296 | + | 1404 | WP_000514417.1 | YfcC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|