MGE detailed information
MGE type: Conjugative plasmid MGE length: 116001 bp
Accession: NZ_CP057245 Location: 1..116001 Organism: Escherichia fergusonii strain RHB32-C05 Replicon: plasmid pRHB32-C05_3
Accession: NZ_CP057245 Location: 1..116001 Organism: Escherichia fergusonii strain RHB32-C05 Replicon: plasmid pRHB32-C05_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVY96_RS23640 () | 46..1077 | + | 1032 | WP_000907867.1 | replication initiation protein | - |
| HVY96_RS23645 () | 2027..2278 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| HVY96_RS23650 () | 2275..2562 | + | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HVY96_RS23655 () | 2572..3117 | + | 546 | WP_181576141.1 | hypothetical protein | - |
| HVY96_RS23660 () | 4241..4354 | + | 114 | Protein_4 | IS91 family transposase | - |
| HVY96_RS23665 () | 4353..4640 | - | 288 | WP_024195838.1 | helix-turn-helix transcriptional regulator | - |
| HVY96_RS23670 () | 4640..4951 | - | 312 | WP_181667538.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HVY96_RS23675 () | 5690..7261 | - | 1572 | WP_181576148.1 | IS66 family transposase ISCro1 | Transposase |
| HVY96_RS23680 () | 7281..7628 | - | 348 | WP_069906977.1 | IS66 family transposase ISCro1 | Transposase |
| HVY96_RS23685 () | 7628..8230 | - | 603 | WP_181576147.1 | IS66 family transposase IS679 | Transposase |
| HVY96_RS23690 () | 8366..8719 | + | 354 | Protein_10 | IS256 family transposase IS1414 | Transposase |
| HVY96_RS23695 () | 8719..9933 | - | 1215 | WP_181576146.1 | IS256 family transposase IS1414 | Transposase |
| HVY96_RS23700 () | 10156..11289 | - | 1134 | WP_181576145.1 | IS110 family transposase ISEc45 | Transposase |
| HVY96_RS23705 () | 11350..11538 | + | 189 | Protein_13 | IS66 family transposase | - |
| HVY96_RS23710 () | 11598..12209 | - | 612 | Protein_14 | IS91 family transposase IS91 | Transposase |
| HVY96_RS23715 () | 12209..12574 | - | 366 | WP_112032305.1 | transposase | - |
| HVY96_RS23720 () | 12663..12968 | + | 306 | Protein_16 | IS66 family transposase IS682 | Transposase |
| HVY96_RS23725 () | 13328..14410 | - | 1083 | WP_181670305.1 | hypothetical protein | - |
| HVY96_RS23730 () | 14470..17106 | - | 2637 | WP_181576143.1 | TcfC E-set like domain-containing protein | - |
| HVY96_RS23735 () | 17145..17645 | - | 501 | WP_181576142.1 | CFA/I fimbrial subunit B | VF |
| HVY96_RS23740 () | 17710..18438 | - | 729 | WP_021555111.1 | putative fimbrial chaperone EcpE | VF |
| HVY96_RS23745 () | 18671..19368 | - | 698 | Protein_21 | IS1 family transposase | - |
| HVY96_RS23750 () | 20201..20566 | + | 366 | WP_000124135.1 | hypothetical protein | - |
| HVY96_RS23755 () | 20566..21581 | + | 1016 | Protein_23 | IS91 family transposase ISEc37 | Transposase |
| HVY96_RS23760 () | 22087..22173 | + | 87 | Protein_24 | proQ/FINO family protein | - |
| HVY96_RS23765 () | 22366..23907 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| HVY96_RS23770 () | 23922..24668 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HVY96_RS23775 () | 24763..24990 | + | 228 | WP_181667542.1 | hypothetical protein | - |
| HVY96_RS23780 () | 25348..26352 | - | 1005 | WP_088551065.1 | Abi family protein | - |
| HVY96_RS23785 () | 26500..27108 | - | 609 | WP_160520256.1 | hypothetical protein | - |
| HVY96_RS23790 () | 27328..27828 | + | 501 | WP_000528932.1 | hypothetical protein | - |
| HVY96_RS23795 () | 27841..28614 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| HVY96_RS23800 () | 28781..29914 | + | 1134 | WP_181576151.1 | DUF3800 domain-containing protein | - |
| HVY96_RS23805 () | 29948..30460 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| HVY96_RS23810 () | 30691..30768 | + | 78 | Protein_34 | helix-turn-helix domain-containing protein | - |
| HVY96_RS23815 () | 31012..31356 | + | 345 | WP_001559862.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| HVY96_RS23820 () | 31379..31873 | + | 495 | WP_024195926.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| HVY96_RS23825 () | 32055..34811 | + | 2757 | Protein_37 | hypothetical protein | - |
| HVY96_RS23830 () | 34863..35560 | + | 698 | Protein_38 | IS1 family transposase | - |
| HVY96_RS23835 () | 35575..36639 | + | 1065 | Protein_39 | hypothetical protein | - |
| HVY96_RS23840 () | 37169..37519 | + | 351 | WP_000493380.1 | hypothetical protein | - |
| HVY96_RS23845 () | 37578..38399 | + | 822 | WP_001316850.1 | hypothetical protein | - |
| HVY96_RS23850 () | 38399..38668 | + | 270 | Protein_42 | tyrosine-type recombinase/integrase | - |
| HVY96_RS23855 () | 38730..39527 | - | 798 | WP_181670307.1 | IS21 family transposase IS21 | Transposase |
| HVY96_RS23860 () | 39527..40699 | - | 1173 | WP_181575950.1 | IS21 family transposase IS21 | Transposase |
| HVY96_RS23865 () | 40801..41313 | + | 513 | Protein_45 | IS91 family transposase ISSod25 | Transposase |
| HVY96_RS23870 () | 41492..42136 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HVY96_RS23875 () | 42223..42531 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HVY96_RS23880 () | 42944..43924 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HVY96_RS23885 () | 43917..44333 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HVY96_RS23890 () | 44335..45609 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| HVY96_RS23895 () | 45609..46046 | - | 438 | WP_063101788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HVY96_RS23900 () | 46043..46291 | - | 249 | WP_001775014.1 | DinI-like family protein | - |
| HVY96_RS23905 () | 46709..47611 | + | 903 | WP_181576155.1 | DUF1281 domain-containing protein | - |
| HVY96_RS23910 () | 47608..47919 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| HVY96_RS23915 () | 47995..48678 | + | 684 | WP_096970087.1 | DNA methylase | - |
| HVY96_RS23920 () | 48679..48900 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| HVY96_RS23925 () | 48913..49347 | + | 435 | WP_000274471.1 | DUF1380 family protein | - |
| HVY96_RS23930 () | 49347..50168 | + | 822 | WP_181576153.1 | hypothetical protein | - |
| HVY96_RS23935 () | 50703..51005 | + | 303 | WP_077635719.1 | antirestriction protein | - |
| HVY96_RS23940 () | 51052..51474 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| HVY96_RS23945 () | 51471..51662 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HVY96_RS23950 () | 51940..53607 | - | 1668 | WP_052991863.1 | group II intron reverse transcriptase/maturase | - |
| HVY96_RS23955 () | 54774..55301 | + | 528 | WP_181576154.1 | single-stranded DNA-binding protein | - |
| HVY96_RS23960 () | 55359..55592 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| HVY96_RS23965 () | 55651..57609 | + | 1959 | WP_134881395.1 | ParB/RepB/Spo0J family partition protein | - |
| HVY96_RS23970 () | 57664..58098 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HVY96_RS23975 () | 58095..58814 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HVY96_RS23980 () | 58811..59407 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| HVY96_RS23985 () | 59870..60370 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| HVY96_RS23990 () | 61099..61533 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| HVY96_RS23995 () | 61627..61893 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HVY96_RS24000 () | 61958..62896 | + | 939 | WP_181667540.1 | Recombination-promoting nuclease RpnA | VF |
| HVY96_RS24005 () | 62896..63141 | + | 246 | WP_181667541.1 | hypothetical protein | - |
| HVY96_RS24010 () | 63172..63423 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| HVY96_RS24015 () | 63583..63759 | - | 177 | WP_181576134.1 | hypothetical protein | - |
| HVY96_RS24020 () | 64003..64851 | + | 849 | WP_001077033.1 | DUF4942 domain-containing protein | - |
| HVY96_RS24025 () | 64936..65271 | - | 336 | WP_089618595.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HVY96_RS24030 () | 65505..65837 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HVY96_RS24035 () | 65848..68547 | + | 2700 | WP_181576135.1 | Protein TraI | Relaxase |
| HVY96_RS24040 () | 68584..70875 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| HVY96_RS24045 () | 70868..71938 | - | 1071 | WP_001542508.1 | IncI1-type conjugal transfer protein TrbB | - |
| HVY96_RS24050 () | 71957..73165 | - | 1209 | WP_175237471.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 73345..73407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 73345..73407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 73345..73407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 73345..73407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| HVY96_RS24055 () | 73457..73609 | + | 153 | WP_024179514.1 | Hok/Gef family protein | Toxin Detail |
| HVY96_RS24060 () | 73681..73932 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| HVY96_RS24065 () | 74975..75184 | - | 210 | WP_015059315.1 | hemolysin expression modulator Hha | - |
| HVY96_RS24070 () | 75282..75896 | - | 615 | WP_015059316.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HVY96_RS24075 () | 75972..78140 | - | 2169 | WP_181667536.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| HVY96_RS24080 () | 78237..78821 | - | 585 | WP_003566808.1 | IncI1-type conjugal transfer protein TraX | - |
| HVY96_RS24085 () | 78850..80052 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| HVY96_RS24090 () | 80019..80633 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| HVY96_RS24095 () | 80633..83677 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| HVY96_RS24100 () | 83767..84567 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HVY96_RS24105 () | 84551..84739 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HVY96_RS24110 () | 84803..85207 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| HVY96_RS24115 () | 85258..85785 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HVY96_RS24120 () | 85785..86489 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HVY96_RS24125 () | 86489..87778 | - | 1290 | WP_001271992.1 | conjugal transfer protein TraO | - |
| HVY96_RS24130 () | 87781..88764 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| HVY96_RS24135 () | 88775..89467 | - | 693 | WP_181576137.1 | DotI/IcmL family type IV secretion protein | - |
| HVY96_RS24140 () | 89464..89811 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HVY96_RS24145 () | 89829..93596 | - | 3768 | WP_181576138.1 | DNA primase | - |
| HVY96_RS24150 () | 93686..94237 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| HVY96_RS24155 () | 94252..94542 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HVY96_RS24160 () | 94539..95687 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| HVY96_RS24165 () | 95684..96502 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| HVY96_RS24170 () | 96499..96957 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HVY96_RS24175 () | 97352..97936 | - | 585 | WP_000977526.1 | histidine phosphatase family protein | - |
| HVY96_RS24180 () | 97996..99198 | - | 1203 | WP_000976350.1 | conjugal transfer protein TraF | - |
| HVY96_RS24185 () | 99284..100108 | - | 825 | WP_001238943.1 | hypothetical protein | - |
| HVY96_RS24190 () | 100316..100441 | + | 126 | Protein_110 | transposase | - |
| HVY96_RS24195 () | 100498..101790 | - | 1293 | WP_181576140.1 | hypothetical protein | VF |
| HVY96_RS24200 () | 101790..102446 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| HVY96_RS24205 () | 102431..102991 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| HVY96_RS24210 () | 103001..103614 | - | 614 | Protein_114 | hypothetical protein | VF |
| HVY96_RS24215 () | 103631..104716 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HVY96_RS24220 () | 104729..106282 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HVY96_RS24225 () | 106293..106745 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| HVY96_RS24230 () | 106732..108027 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| HVY96_RS24235 () | 108020..109702 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HVY96_RS24240 () | 109716..110153 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| HVY96_RS24245 () | 110153..111220 | - | 1068 | WP_042012078.1 | hypothetical protein | VF |
| HVY96_RS24250 () | 112267..112521 | - | 255 | WP_041031712.1 | PilI type IV pilus biogenesis protein | - |
| HVY96_RS24255 () | 112693..113376 | - | 684 | WP_001377964.1 | hypothetical protein | - |
| HVY96_RS24260 () | 113630..114163 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| HVY96_RS24265 () | 114606..114893 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| HVY96_RS24270 () | 114811..115074 | - | 264 | WP_001749178.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|