MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 68918 bp
Accession: NZ_CP056505 Location: 4502509..4571426 Organism: Citrobacter freundii strain RHBSTW-00449 Replicon: chromosome
Accession: NZ_CP056505 Location: 4502509..4571426 Organism: Citrobacter freundii strain RHBSTW-00449 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV201_RS21990 () | 4498780..4499142 | + | 363 | WP_181522654.1 | endoribonuclease SymE | - |
| HV201_RS21995 () | 4499386..4500060 | + | 675 | WP_048219800.1 | hypothetical protein | - |
| HV201_RS22000 () | 4500062..4500409 | + | 348 | WP_048219801.1 | hypothetical protein | - |
| HV201_RS22005 () | 4500412..4500891 | + | 480 | WP_003031579.1 | type VI secretion system tube protein Hcp | - |
| HV201_RS22010 () | 4501110..4501436 | - | 327 | WP_040230261.1 | DUF1493 family protein | - |
| HV201_RS22015 () | 4501633..4502505 | + | 873 | WP_082804816.1 | HNH endonuclease | - |
| HV201_RS22020 () | 4502641..4503525 | + | 885 | WP_044059532.1 | ParA family protein | - |
| HV201_RS22025 () | 4503522..4503896 | + | 375 | WP_000823396.1 | hypothetical protein | - |
| HV201_RS22030 () | 4503889..4505244 | + | 1356 | WP_061548417.1 | replicative DNA helicase | - |
| HV201_RS22035 () | 4505241..4506731 | + | 1491 | WP_061548418.1 | chromosome partitioning protein ParB | - |
| HV201_RS22040 () | 4506715..4507254 | + | 540 | WP_061548419.1 | DUF2857 domain-containing protein | - |
| HV201_RS22045 () | 4507273..4508406 | + | 1134 | WP_061548420.1 | helix-turn-helix domain-containing protein | - |
| HV201_RS22050 () | 4508472..4509143 | - | 672 | WP_000863683.1 | hypothetical protein | - |
| HV201_RS22055 () | 4509270..4510598 | - | 1329 | WP_061548423.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| HV201_RS22060 () | 4510603..4510908 | - | 306 | WP_072291329.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HV201_RS22065 () | 4511459..4512108 | + | 650 | Protein_4333 | AIDA repeat-containing protein | - |
| HV201_RS22070 () | 4512292..4513368 | + | 1077 | WP_181522655.1 | type II toxin-antitoxin system RnlA family toxin | Toxin Detail |
| HV201_RS22075 () | 4513361..4513732 | + | 372 | WP_181522656.1 | type II toxin-antitoxin system RnlB family antitoxin | Antitoxin Detail |
| HV201_RS22080 () | 4514308..4515006 | + | 699 | WP_181522657.1 | TIGR03761 family integrating conjugative element protein | - |
| HV201_RS22085 () | 4514996..4515490 | + | 495 | WP_181522658.1 | DUF3158 family protein | - |
| HV201_RS22090 () | 4515539..4515814 | - | 276 | WP_061548156.1 | hypothetical protein | - |
| HV201_RS22095 () | 4516056..4516472 | + | 417 | WP_001291902.1 | DUF3577 domain-containing protein | - |
| HV201_RS22100 () | 4516593..4517060 | + | 468 | WP_061548155.1 | hypothetical protein | VF |
| HV201_RS22105 () | 4517053..4517661 | + | 609 | WP_061548154.1 | hypothetical protein | - |
| HV201_RS22110 () | 4517668..4518318 | + | 651 | WP_061548153.1 | TIGR03759 family integrating conjugative element protein | - |
| HV201_RS22115 () | 4518294..4518824 | + | 531 | WP_061548152.1 | hypothetical protein | VF |
| HV201_RS22120 () | 4518821..4519228 | + | 408 | WP_061548151.1 | integrating conjugative element protein | - |
| HV201_RS22125 () | 4519225..4521258 | + | 2034 | WP_061548150.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV201_RS22130 () | 4521221..4521487 | + | 267 | WP_061548149.1 | hypothetical protein | - |
| HV201_RS22135 () | 4521487..4522170 | + | 684 | WP_061548148.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HV201_RS22140 () | 4522301..4523074 | + | 774 | WP_061548147.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| HV201_RS22145 () | 4523067..4523984 | + | 918 | WP_061548146.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| HV201_RS22150 () | 4524023..4524316 | + | 294 | WP_082804811.1 | DUF4400 domain-containing protein | - |
| HV201_RS22155 () | 4524396..4526126 | + | 1731 | WP_181522659.1 | hypothetical protein | - |
| HV201_RS22160 () | 4526214..4526531 | + | 318 | WP_061548143.1 | conjugal transfer protein | - |
| HV201_RS22165 () | 4526528..4526761 | + | 234 | WP_049059556.1 | TIGR03758 family integrating conjugative element protein | - |
| HV201_RS22170 () | 4526780..4527106 | + | 327 | WP_044059507.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HV201_RS22175 () | 4527110..4527463 | + | 354 | WP_061548142.1 | TIGR03750 family conjugal transfer protein | - |
| HV201_RS22180 () | 4527460..4528086 | + | 627 | WP_061548141.1 | TIGR03746 family integrating conjugative element protein | - |
| HV201_RS22185 () | 4528083..4528865 | + | 783 | WP_061548140.1 | TIGR03749 family integrating conjugative element protein | - |
| HV201_RS22190 () | 4528862..4530199 | + | 1338 | WP_061548139.1 | TIGR03752 family integrating conjugative element protein | - |
| HV201_RS22195 () | 4530199..4530588 | + | 390 | WP_061548138.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HV201_RS22200 () | 4530588..4533239 | + | 2652 | WP_061548137.1 | conjugative transfer ATPase | - |
| HV201_RS22205 () | 4533435..4534997 | + | 1563 | WP_061548136.1 | hypothetical protein | - |
| HV201_RS22210 () | 4535416..4536570 | - | 1155 | WP_181522660.1 | hypothetical protein | - |
| HV201_RS22215 () | 4536607..4537899 | - | 1293 | WP_061548134.1 | hypothetical protein | - |
| HV201_RS22220 () | 4538017..4538343 | - | 327 | WP_061548133.1 | helix-turn-helix domain-containing protein | - |
| HV201_RS22225 () | 4538419..4538763 | - | 345 | WP_061548132.1 | helix-turn-helix transcriptional regulator | - |
| HV201_RS22230 () | 4538841..4539101 | + | 261 | WP_061548131.1 | helix-turn-helix domain-containing protein | - |
| HV201_RS22235 () | 4539098..4539832 | + | 735 | WP_061548130.1 | Crp/Fnr family transcriptional regulator | - |
| HV201_RS22240 () | 4540062..4540907 | - | 846 | WP_181522661.1 | hypothetical protein | - |
| HV201_RS22245 () | 4541223..4542401 | - | 1179 | WP_061548128.1 | anaerobic sulfatase maturase | - |
| HV201_RS22250 () | 4542398..4543198 | - | 801 | WP_061548127.1 | sulfite exporter TauE/SafE family protein | - |
| HV201_RS22255 () | 4543202..4544494 | - | 1293 | WP_181522826.1 | hypothetical protein | VF |
| HV201_RS22260 () | 4544508..4545752 | - | 1245 | WP_061548126.1 | oligosaccharide MFS transporter | - |
| HV201_RS22265 () | 4546027..4549176 | + | 3150 | WP_061548125.1 | alpha-N-acetylglucosaminidase C-terminal domain-containing protein | - |
| HV201_RS22270 () | 4549240..4550247 | + | 1008 | WP_061548124.1 | OmpG family monomeric porin | - |
| HV201_RS22275 () | 4550263..4551639 | + | 1377 | WP_061548123.1 | glycoside hydrolase family 16 protein | - |
| HV201_RS22280 () | 4551758..4552693 | + | 936 | WP_181522662.1 | TIGR03756 family integrating conjugative element protein | - |
| HV201_RS22285 () | 4552696..4554063 | + | 1368 | WP_061548122.1 | integrating conjugative element protein | - |
| HV201_RS22290 () | 4554060..4554317 | + | 258 | WP_061548121.1 | hypothetical protein | - |
| HV201_RS22295 () | 4554314..4555792 | + | 1479 | WP_061548120.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HV201_RS22300 () | 4555814..4556521 | - | 708 | WP_061548119.1 | M48 family metallopeptidase | - |
| HV201_RS22305 () | 4556518..4559784 | - | 3267 | WP_181522663.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HV201_RS22310 () | 4559777..4561024 | - | 1248 | WP_181522664.1 | restriction endonuclease subunit S | - |
| HV201_RS22315 () | 4561017..4561214 | - | 198 | WP_181522665.1 | hypothetical protein | - |
| HV201_RS22320 () | 4561406..4562422 | - | 1017 | WP_094169092.1 | IS5 family transposase IS5D | Transposase |
| HV201_RS22325 () | 4562456..4564756 | - | 2301 | Protein_4385 | SAM-dependent DNA methyltransferase | - |
| HV201_RS22330 () | 4564844..4565764 | - | 921 | WP_061547563.1 | hypothetical protein | - |
| HV201_RS22335 () | 4565976..4566848 | + | 873 | WP_061547564.1 | HNH endonuclease | - |
| HV201_RS22340 () | 4567215..4567508 | + | 294 | WP_006686434.1 | hypothetical protein | - |
| HV201_RS22345 () | 4567594..4568505 | + | 912 | WP_061547566.1 | DUF1738 domain-containing protein | - |
| HV201_RS22350 () | 4568685..4570304 | + | 1620 | WP_061547567.1 | helicase/relaxase domain-containing protein | - |
| HV201_RS22355 () | 4570294..4571220 | + | 927 | WP_061547568.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HV201_RS22365 () | 4571675..4572694 | + | 1020 | WP_048236253.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| HV201_RS22370 () | 4572842..4574344 | + | 1503 | WP_061547596.1 | DUF853 domain-containing protein | - |
| HV201_RS22375 () | 4574446..4575528 | - | 1083 | WP_003025875.1 | LPS export ABC transporter permease LptG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|