NZ_CP0551141..131712

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 131712 bp
Accession: NZ_CP055114        Location: 1..131712         Organism: Shigella flexneri strain SWHIN_101       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HUZ81_RS23990 (1) 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
HUZ81_RS23995 (1263) 1263..2003 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
HUZ81_RS24000 (2124) 2124..2312 - 189 WP_239622799.1 serine/threonine protein kinase -
HUZ81_RS24005 (2894) 2894..3244 + 351 WP_000493379.1 hypothetical protein -
HUZ81_RS24010 (3288) 3288..3977 + 690 WP_000796228.1 hypothetical protein -
HUZ81_RS24015 (3974) 3974..4765 + 792 WP_000016493.1 site-specific integrase -
HUZ81_RS24020 (4943) 4943..5296 + 354 WP_000864812.1 colicin M immunity protein -
HUZ81_RS24025 (5346) 5346..6161 - 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
HUZ81_RS24030 (6405) 6405..6932 + 528 WP_000203272.1 colicin B immunity protein -
HUZ81_RS24035 (6950) 6950..7117 - 168 Protein_9 colicin-B -
HUZ81_RS24040 (7290) 7290..7571 + 282 WP_001105066.1 hypothetical protein -
HUZ81_RS24045 (8035) 8035..8271 + 237 WP_014640552.1 colicin V immunity protein -
HUZ81_RS24050 (8249) 8249..8446 + 198 Protein_12 colicin V -
HUZ81_RS24060 (9395) 9395..11572 + 2178 WP_001222186.1 Ferric enterobactin receptor VF
HUZ81_RS24065 (11617) 11617..12573 - 957 WP_064055648.1 Ferri-bacillibactin esterase BesA VF
HUZ81_RS24070 (12658) 12658..13887 - 1230 WP_000933675.1 Enterochelin esterase VF
HUZ81_RS24075 (13991) 13991..17650 - 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
HUZ81_RS24080 (17790) 17790..18905 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
HUZ81_RS24085 (20216) 20216..21244 - 1029 Protein_19 integrase core domain-containing protein -
HUZ81_RS24090 (21759) 21759..21866 + 108 Protein_20 lysis system i-spanin subunit Rz -
HUZ81_RS24095 (21823) 21823..21971 + 149 Protein_21 Rz1 family lipoprotein -
HUZ81_RS24100 (22055) 22055..22348 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
HUZ81_RS24105 (22975) 22975..24211 + 1237 Protein_23 IS3 family transposase IS2 Transposase
HUZ81_RS24110 (25434) 25434..26627 + 1194 WP_000450494.1 GTP-binding protein -
HUZ81_RS24115 (26805) 26805..26954 + 150 Protein_25 IS3 family transposase IS2 Transposase
HUZ81_RS24120 (27264) 27264..28653 + 1390 Protein_26 ISNCY family transposase ISKpn21 Transposase
HUZ81_RS24130 (29485) 29485..29753 + 269 Protein_28 IS3 family transposase ISLad1 Transposase
HUZ81_RS24140 (31253) 31253..31432 + 180 Protein_30 integrase core domain-containing protein -
HUZ81_RS24145 (32729) 32729..33682 + 954 WP_000280980.1 Protease 7 VF
HUZ81_RS24150 (34115) 34115..35224 + 1110 WP_000771475.1 SDR family oxidoreductase -
HUZ81_RS24155 (35293) 35293..36195 + 903 WP_001312822.1 antimicrobial resistance protein Mig-14 -
HUZ81_RS24160 (36519) 36519..40334 - 3816 WP_223364258.1 hypothetical protein -
HUZ81_RS24165 (40560) 40560..40745 + 186 Protein_35 hypothetical protein -
HUZ81_RS24170 (40763) 40763..41110 - 348 WP_000142450.1 DUF6404 family protein -
HUZ81_RS24175 (41412) 41412..41894 - 483 WP_001311056.1 hypothetical protein -
HUZ81_RS24180 (42011) 42011..42859 - 849 WP_023154360.1 3'-5' exonuclease -
HUZ81_RS24185 (42905) 42905..43183 - 279 WP_097309154.1 type II toxin-antitoxin system toxin YacB -
HUZ81_RS24195 (43293) 43293..44009 - 717 Protein_40 Tn3 family transposase -
HUZ81_RS24200 (44043) 44043..45941 - 1899 Protein_41 Tn3 family transposase TnpA_Tn3 Transposase
HUZ81_RS24205 (46018) 46018..46722 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
HUZ81_RS24210 (46916) 46916..47302 + 387 WP_063102497.1 bleomycin binding protein -
HUZ81_RS24215 (47622) 47622..48014 - 393 WP_063501574.1 pyridoxamine 5'-phosphate oxidase family protein -
HUZ81_RS24220 (48349) 48349..49053 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
HUZ81_RS24225 (49373) 49373..50548 + 1176 WP_002914189.1 Efflux pump periplasmic linker BepF VF
HUZ81_RS24230 (50572) 50572..53724 + 3153 WP_000347934.1 Efflux pump membrane transporter BepE VF
HUZ81_RS24235 (53794) 53794..54273 - 480 WP_000888203.1 Rrf2 family transcriptional regulator -
HUZ81_RS24240 (54375) 54375..55079 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
HUZ81_RS24245 (55153) 55153..55626 - 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
HUZ81_RS24250 (55784) 55784..56797 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
HUZ81_RS24255 (57000) 57000..57350 + 351 WP_000454193.1 DUF3330 domain-containing protein -
HUZ81_RS24260 (57476) 57476..57727 + 252 Protein_53 recombinase family protein -
HUZ81_RS24265 (57792) 57792..58496 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
HUZ81_RS24270 (58546) 58546..59265 + 720 Protein_55 helicase RepA family protein -
HUZ81_RS24275 (59252) 59252..60103 + 852 WP_239622802.1 replication protein C, IncQ-type -
HUZ81_RS24280 (60411) 60411..61226 + 816 WP_001043260.1 Dihydropteroate synthase ARG
HUZ81_RS24285 (61287) 61287..62090 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
HUZ81_RS24290 (62090) 62090..62926 + 837 WP_000480968.1 hypothetical protein ARG
HUZ81_RS24295 (62987) 62987..63691 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
HUZ81_RS24300 (63842) 63842..64657 + 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
HUZ81_RS24305 (64847) 64847..65551 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
HUZ81_RS24310 (65616) 65616..66866 - 1251 Protein_63 transposase -
HUZ81_RS24315 (66941) 66941..67609 - 669 WP_001300294.1 putative signaling protein VF
HUZ81_RS24320 (67645) 67645..67881 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
HUZ81_RS24325 (67878) 67878..68240 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
HUZ81_RS24330 (68258) 68258..69952 - 1695 WP_000105636.1 mercury(II) reductase -
HUZ81_RS24335 (70004) 70004..70426 - 423 WP_001340589.1 organomercurial transporter MerC -
HUZ81_RS24340 (70462) 70462..70737 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
HUZ81_RS24345 (70751) 70751..71101 - 351 WP_001294663.1 mercuric transport protein MerT -
HUZ81_RS24350 (71173) 71173..71607 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
HUZ81_RS24360 (72660) 72660..73061 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
HUZ81_RS24365 (72994) 72994..73251 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
HUZ81_RS24370 (73344) 73344..73601 - 258 WP_230133887.1 CPBP family intramembrane metalloprotease -
HUZ81_RS24375 (73594) 73594..73986 - 393 WP_000616804.1 histidine phosphatase family protein -
HUZ81_RS24380 (74084) 74084..74224 - 141 WP_001333237.1 hypothetical protein -
HUZ81_RS24385 (74925) 74925..75782 - 858 WP_239622796.1 incFII family plasmid replication initiator RepA -
HUZ81_RS24390 (75775) 75775..76257 - 483 WP_001273588.1 hypothetical protein -
HUZ81_RS24395 (76250) 76250..76297 - 48 WP_229471593.1 hypothetical protein -
HUZ81_RS24400 (76288) 76288..76539 + 252 WP_223195197.1 replication protein RepA -
HUZ81_RS24405 (76556) 76556..76813 - 258 WP_000083845.1 replication regulatory protein RepA -
HUZ81_RS24410 (77097) 77097..77246 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (77290) 77290..77351 + 62 NuclAT_1 - Antitoxin Detail
- (77290) 77290..77351 + 62 NuclAT_1 - Antitoxin Detail
- (77290) 77290..77351 + 62 NuclAT_1 - Antitoxin Detail
- (77290) 77290..77351 + 62 NuclAT_1 - Antitoxin Detail
HUZ81_RS24415 (77607) 77607..77681 - 75 Protein_84 endonuclease -
HUZ81_RS24420 (77927) 77927..78139 - 213 WP_001299730.1 ANR family transcriptional regulator -
HUZ81_RS24425 (78275) 78275..78835 - 561 WP_000139315.1 fertility inhibition protein FinO -
HUZ81_RS24430 (78938) 78938..79798 - 861 WP_000704514.1 putative protein YcjY VF
HUZ81_RS24435 (79857) 79857..80603 - 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
HUZ81_RS24440 (80623) 80623..85893 - 5271 WP_000986962.1 Multifunctional conjugation protein TraI Relaxase
HUZ81_RS24445 (85975) 85975..86202 + 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
HUZ81_RS24450 (86202) 86202..86600 + 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
HUZ81_RS24455 (86609) 86609..88762 - 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
HUZ81_RS24460 (89015) 89015..89746 - 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
HUZ81_RS24465 (89778) 89778..90275 - 498 WP_000605857.1 entry exclusion protein -
HUZ81_RS24470 (90291) 90291..93113 - 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
HUZ81_RS24475 (93110) 93110..94483 - 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
HUZ81_RS24480 (94483) 94483..94863 - 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
HUZ81_RS24485 (94850) 94850..95191 - 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
HUZ81_RS24490 (95121) 95121..95666 - 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
HUZ81_RS24495 (95653) 95653..95937 - 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
HUZ81_RS24500 (96018) 96018..96332 + 315 WP_001324103.1 hypothetical protein -
HUZ81_RS24505 (96334) 96334..96681 - 348 WP_001287910.1 conjugal transfer protein TrbA -
HUZ81_RS24510 (96697) 96697..97440 - 744 WP_001030393.1 type-F conjugative transfer system pilin assembly protein TraF -
HUZ81_RS24515 (97433) 97433..97690 - 258 WP_000864318.1 conjugal transfer protein TrbE -
HUZ81_RS24520 (97717) 97717..98538 - 822 Protein_105 conjugal transfer protein TraN -
HUZ81_RS24525 (98529) 98529..99134 - 606 Protein_106 conjugal transfer protein TraB -
HUZ81_RS24530 (99134) 99134..99862 - 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
HUZ81_RS24535 (99849) 99849..100415 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
HUZ81_RS24540 (100437) 100437..100748 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
HUZ81_RS24545 (100763) 100763..101128 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
HUZ81_RS24550 (101161) 101161..101562 - 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
HUZ81_RS24555 (101655) 101655..102344 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
HUZ81_RS24560 (102531) 102531..102914 - 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
HUZ81_RS24565 (103235) 103235..103837 + 603 WP_000243712.1 hypothetical protein VF
HUZ81_RS24570 (104134) 104134..104955 - 822 WP_001234426.1 DUF932 domain-containing protein -
HUZ81_RS24575 (105073) 105073..105360 - 288 WP_000107535.1 hypothetical protein -
HUZ81_RS24580 (105385) 105385..105591 - 207 WP_000547968.1 hypothetical protein -
HUZ81_RS24585 (105661) 105661..105833 + 173 Protein_118 hypothetical protein -
HUZ81_RS24590 (105831) 105831..106061 - 231 WP_071586998.1 hypothetical protein -
HUZ81_RS24595 (106281) 106281..106406 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
HUZ81_RS24600 (106348) 106348..106497 - 150 Protein_121 plasmid maintenance protein Mok -
- (106483) 106483..106707 - 225 NuclAT_0 - Antitoxin Detail
- (106483) 106483..106707 - 225 NuclAT_0 - Antitoxin Detail
- (106483) 106483..106707 - 225 NuclAT_0 - Antitoxin Detail
- (106483) 106483..106707 - 225 NuclAT_0 - Antitoxin Detail
HUZ81_RS24605 (106519) 106519..106707 + 189 WP_001299721.1 hypothetical protein -
HUZ81_RS24610 (106676) 106676..107438 - 763 Protein_123 plasmid SOS inhibition protein A -
HUZ81_RS24615 (107435) 107435..107869 - 435 WP_000845936.1 conjugation system SOS inhibitor PsiB -
HUZ81_RS24620 (107924) 107924..108121 - 198 Protein_125 hypothetical protein -
HUZ81_RS24625 (108149) 108149..108382 - 234 WP_000005987.1 DUF905 family protein -
HUZ81_RS24630 (108450) 108450..108989 - 540 WP_000290840.1 single-stranded DNA-binding protein -
HUZ81_RS24635 (109015) 109015..109221 - 207 WP_000275856.1 hypothetical protein -
HUZ81_RS24640 (109291) 109291..109371 + 81 Protein_129 hypothetical protein -
HUZ81_RS24645 (109554) 109554..109723 - 170 Protein_130 hypothetical protein -
HUZ81_RS24650 (110360) 110360..111331 - 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
HUZ81_RS24655 (111331) 111331..112497 - 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
HUZ81_RS24665 (113979) 113979..116174 - 2196 WP_175267602.1 Ferric aerobactin receptor VF
HUZ81_RS24670 (116206) 116206..117539 - 1334 Protein_135 L-lysine N6-monooxygenase VF
HUZ81_RS24675 (117536) 117536..119278 - 1743 WP_001015721.1 Aerobactin synthase VF
HUZ81_RS24680 (119278) 119278..120225 - 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase VF
HUZ81_RS24685 (120226) 120226..121950 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
HUZ81_RS24690 (122086) 122086..123279 + 1194 WP_000095526.1 MFS transporter -
HUZ81_RS24695 (123659) 123659..124039 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
HUZ81_RS24700 (124380) 124380..124793 - 414 Protein_141 phosphopyruvate hydratase -
HUZ81_RS24705 (124791) 124791..125048 + 258 Protein_142 Tn3 family transposase -
HUZ81_RS24710 (125282) 125282..126139 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
HUZ81_RS24715 (126136) 126136..126993 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
HUZ81_RS24720 (126990) 126990..127817 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
HUZ81_RS24725 (127817) 127817..128731 - 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
HUZ81_RS24730 (129087) 129087..129784 + 698 WP_223155668.1 IS1-like element IS1A family transposase -
HUZ81_RS24735 (129964) 129964..130477 - 514 Protein_148 DUF4113 domain-containing protein -
HUZ81_RS24740 (130538) 130538..130642 - 105 Protein_149 AAA family ATPase -
HUZ81_RS24745 (130644) 130644..130967 - 324 Protein_150 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance