MGE detailed information
MGE type: Conjugative plasmid MGE length: 131712 bp
Accession: NZ_CP055114 Location: 1..131712 Organism: Shigella flexneri strain SWHIN_101 Replicon: plasmid unnamed1
Accession: NZ_CP055114 Location: 1..131712 Organism: Shigella flexneri strain SWHIN_101 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HUZ81_RS23990 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
HUZ81_RS23995 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
HUZ81_RS24000 (2124) | 2124..2312 | - | 189 | WP_239622799.1 | serine/threonine protein kinase | - |
HUZ81_RS24005 (2894) | 2894..3244 | + | 351 | WP_000493379.1 | hypothetical protein | - |
HUZ81_RS24010 (3288) | 3288..3977 | + | 690 | WP_000796228.1 | hypothetical protein | - |
HUZ81_RS24015 (3974) | 3974..4765 | + | 792 | WP_000016493.1 | site-specific integrase | - |
HUZ81_RS24020 (4943) | 4943..5296 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
HUZ81_RS24025 (5346) | 5346..6161 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
HUZ81_RS24030 (6405) | 6405..6932 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
HUZ81_RS24035 (6950) | 6950..7117 | - | 168 | Protein_9 | colicin-B | - |
HUZ81_RS24040 (7290) | 7290..7571 | + | 282 | WP_001105066.1 | hypothetical protein | - |
HUZ81_RS24045 (8035) | 8035..8271 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
HUZ81_RS24050 (8249) | 8249..8446 | + | 198 | Protein_12 | colicin V | - |
HUZ81_RS24060 (9395) | 9395..11572 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
HUZ81_RS24065 (11617) | 11617..12573 | - | 957 | WP_064055648.1 | Ferri-bacillibactin esterase BesA | VF |
HUZ81_RS24070 (12658) | 12658..13887 | - | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
HUZ81_RS24075 (13991) | 13991..17650 | - | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
HUZ81_RS24080 (17790) | 17790..18905 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
HUZ81_RS24085 (20216) | 20216..21244 | - | 1029 | Protein_19 | integrase core domain-containing protein | - |
HUZ81_RS24090 (21759) | 21759..21866 | + | 108 | Protein_20 | lysis system i-spanin subunit Rz | - |
HUZ81_RS24095 (21823) | 21823..21971 | + | 149 | Protein_21 | Rz1 family lipoprotein | - |
HUZ81_RS24100 (22055) | 22055..22348 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
HUZ81_RS24105 (22975) | 22975..24211 | + | 1237 | Protein_23 | IS3 family transposase IS2 | Transposase |
HUZ81_RS24110 (25434) | 25434..26627 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
HUZ81_RS24115 (26805) | 26805..26954 | + | 150 | Protein_25 | IS3 family transposase IS2 | Transposase |
HUZ81_RS24120 (27264) | 27264..28653 | + | 1390 | Protein_26 | ISNCY family transposase ISKpn21 | Transposase |
HUZ81_RS24130 (29485) | 29485..29753 | + | 269 | Protein_28 | IS3 family transposase ISLad1 | Transposase |
HUZ81_RS24140 (31253) | 31253..31432 | + | 180 | Protein_30 | integrase core domain-containing protein | - |
HUZ81_RS24145 (32729) | 32729..33682 | + | 954 | WP_000280980.1 | Protease 7 | VF |
HUZ81_RS24150 (34115) | 34115..35224 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
HUZ81_RS24155 (35293) | 35293..36195 | + | 903 | WP_001312822.1 | antimicrobial resistance protein Mig-14 | - |
HUZ81_RS24160 (36519) | 36519..40334 | - | 3816 | WP_223364258.1 | hypothetical protein | - |
HUZ81_RS24165 (40560) | 40560..40745 | + | 186 | Protein_35 | hypothetical protein | - |
HUZ81_RS24170 (40763) | 40763..41110 | - | 348 | WP_000142450.1 | DUF6404 family protein | - |
HUZ81_RS24175 (41412) | 41412..41894 | - | 483 | WP_001311056.1 | hypothetical protein | - |
HUZ81_RS24180 (42011) | 42011..42859 | - | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
HUZ81_RS24185 (42905) | 42905..43183 | - | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | - |
HUZ81_RS24195 (43293) | 43293..44009 | - | 717 | Protein_40 | Tn3 family transposase | - |
HUZ81_RS24200 (44043) | 44043..45941 | - | 1899 | Protein_41 | Tn3 family transposase TnpA_Tn3 | Transposase |
HUZ81_RS24205 (46018) | 46018..46722 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
HUZ81_RS24210 (46916) | 46916..47302 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
HUZ81_RS24215 (47622) | 47622..48014 | - | 393 | WP_063501574.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
HUZ81_RS24220 (48349) | 48349..49053 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
HUZ81_RS24225 (49373) | 49373..50548 | + | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
HUZ81_RS24230 (50572) | 50572..53724 | + | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
HUZ81_RS24235 (53794) | 53794..54273 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
HUZ81_RS24240 (54375) | 54375..55079 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
HUZ81_RS24245 (55153) | 55153..55626 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
HUZ81_RS24250 (55784) | 55784..56797 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
HUZ81_RS24255 (57000) | 57000..57350 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
HUZ81_RS24260 (57476) | 57476..57727 | + | 252 | Protein_53 | recombinase family protein | - |
HUZ81_RS24265 (57792) | 57792..58496 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
HUZ81_RS24270 (58546) | 58546..59265 | + | 720 | Protein_55 | helicase RepA family protein | - |
HUZ81_RS24275 (59252) | 59252..60103 | + | 852 | WP_239622802.1 | replication protein C, IncQ-type | - |
HUZ81_RS24280 (60411) | 60411..61226 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
HUZ81_RS24285 (61287) | 61287..62090 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
HUZ81_RS24290 (62090) | 62090..62926 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
HUZ81_RS24295 (62987) | 62987..63691 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
HUZ81_RS24300 (63842) | 63842..64657 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
HUZ81_RS24305 (64847) | 64847..65551 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
HUZ81_RS24310 (65616) | 65616..66866 | - | 1251 | Protein_63 | transposase | - |
HUZ81_RS24315 (66941) | 66941..67609 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
HUZ81_RS24320 (67645) | 67645..67881 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
HUZ81_RS24325 (67878) | 67878..68240 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
HUZ81_RS24330 (68258) | 68258..69952 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
HUZ81_RS24335 (70004) | 70004..70426 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
HUZ81_RS24340 (70462) | 70462..70737 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
HUZ81_RS24345 (70751) | 70751..71101 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
HUZ81_RS24350 (71173) | 71173..71607 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
HUZ81_RS24360 (72660) | 72660..73061 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
HUZ81_RS24365 (72994) | 72994..73251 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
HUZ81_RS24370 (73344) | 73344..73601 | - | 258 | WP_230133887.1 | CPBP family intramembrane metalloprotease | - |
HUZ81_RS24375 (73594) | 73594..73986 | - | 393 | WP_000616804.1 | histidine phosphatase family protein | - |
HUZ81_RS24380 (74084) | 74084..74224 | - | 141 | WP_001333237.1 | hypothetical protein | - |
HUZ81_RS24385 (74925) | 74925..75782 | - | 858 | WP_239622796.1 | incFII family plasmid replication initiator RepA | - |
HUZ81_RS24390 (75775) | 75775..76257 | - | 483 | WP_001273588.1 | hypothetical protein | - |
HUZ81_RS24395 (76250) | 76250..76297 | - | 48 | WP_229471593.1 | hypothetical protein | - |
HUZ81_RS24400 (76288) | 76288..76539 | + | 252 | WP_223195197.1 | replication protein RepA | - |
HUZ81_RS24405 (76556) | 76556..76813 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
HUZ81_RS24410 (77097) | 77097..77246 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
- (77290) | 77290..77351 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
- (77290) | 77290..77351 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
- (77290) | 77290..77351 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
- (77290) | 77290..77351 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
HUZ81_RS24415 (77607) | 77607..77681 | - | 75 | Protein_84 | endonuclease | - |
HUZ81_RS24420 (77927) | 77927..78139 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
HUZ81_RS24425 (78275) | 78275..78835 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
HUZ81_RS24430 (78938) | 78938..79798 | - | 861 | WP_000704514.1 | putative protein YcjY | VF |
HUZ81_RS24435 (79857) | 79857..80603 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
HUZ81_RS24440 (80623) | 80623..85893 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
HUZ81_RS24445 (85975) | 85975..86202 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
HUZ81_RS24450 (86202) | 86202..86600 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
HUZ81_RS24455 (86609) | 86609..88762 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
HUZ81_RS24460 (89015) | 89015..89746 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
HUZ81_RS24465 (89778) | 89778..90275 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
HUZ81_RS24470 (90291) | 90291..93113 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
HUZ81_RS24475 (93110) | 93110..94483 | - | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
HUZ81_RS24480 (94483) | 94483..94863 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
HUZ81_RS24485 (94850) | 94850..95191 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
HUZ81_RS24490 (95121) | 95121..95666 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
HUZ81_RS24495 (95653) | 95653..95937 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
HUZ81_RS24500 (96018) | 96018..96332 | + | 315 | WP_001324103.1 | hypothetical protein | - |
HUZ81_RS24505 (96334) | 96334..96681 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
HUZ81_RS24510 (96697) | 96697..97440 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
HUZ81_RS24515 (97433) | 97433..97690 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
HUZ81_RS24520 (97717) | 97717..98538 | - | 822 | Protein_105 | conjugal transfer protein TraN | - |
HUZ81_RS24525 (98529) | 98529..99134 | - | 606 | Protein_106 | conjugal transfer protein TraB | - |
HUZ81_RS24530 (99134) | 99134..99862 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
HUZ81_RS24535 (99849) | 99849..100415 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
HUZ81_RS24540 (100437) | 100437..100748 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
HUZ81_RS24545 (100763) | 100763..101128 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
HUZ81_RS24550 (101161) | 101161..101562 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
HUZ81_RS24555 (101655) | 101655..102344 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
HUZ81_RS24560 (102531) | 102531..102914 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
HUZ81_RS24565 (103235) | 103235..103837 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
HUZ81_RS24570 (104134) | 104134..104955 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
HUZ81_RS24575 (105073) | 105073..105360 | - | 288 | WP_000107535.1 | hypothetical protein | - |
HUZ81_RS24580 (105385) | 105385..105591 | - | 207 | WP_000547968.1 | hypothetical protein | - |
HUZ81_RS24585 (105661) | 105661..105833 | + | 173 | Protein_118 | hypothetical protein | - |
HUZ81_RS24590 (105831) | 105831..106061 | - | 231 | WP_071586998.1 | hypothetical protein | - |
HUZ81_RS24595 (106281) | 106281..106406 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
HUZ81_RS24600 (106348) | 106348..106497 | - | 150 | Protein_121 | plasmid maintenance protein Mok | - |
- (106483) | 106483..106707 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
- (106483) | 106483..106707 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
- (106483) | 106483..106707 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
- (106483) | 106483..106707 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
HUZ81_RS24605 (106519) | 106519..106707 | + | 189 | WP_001299721.1 | hypothetical protein | - |
HUZ81_RS24610 (106676) | 106676..107438 | - | 763 | Protein_123 | plasmid SOS inhibition protein A | - |
HUZ81_RS24615 (107435) | 107435..107869 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
HUZ81_RS24620 (107924) | 107924..108121 | - | 198 | Protein_125 | hypothetical protein | - |
HUZ81_RS24625 (108149) | 108149..108382 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
HUZ81_RS24630 (108450) | 108450..108989 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
HUZ81_RS24635 (109015) | 109015..109221 | - | 207 | WP_000275856.1 | hypothetical protein | - |
HUZ81_RS24640 (109291) | 109291..109371 | + | 81 | Protein_129 | hypothetical protein | - |
HUZ81_RS24645 (109554) | 109554..109723 | - | 170 | Protein_130 | hypothetical protein | - |
HUZ81_RS24650 (110360) | 110360..111331 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
HUZ81_RS24655 (111331) | 111331..112497 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
HUZ81_RS24665 (113979) | 113979..116174 | - | 2196 | WP_175267602.1 | Ferric aerobactin receptor | VF |
HUZ81_RS24670 (116206) | 116206..117539 | - | 1334 | Protein_135 | L-lysine N6-monooxygenase | VF |
HUZ81_RS24675 (117536) | 117536..119278 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
HUZ81_RS24680 (119278) | 119278..120225 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
HUZ81_RS24685 (120226) | 120226..121950 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
HUZ81_RS24690 (122086) | 122086..123279 | + | 1194 | WP_000095526.1 | MFS transporter | - |
HUZ81_RS24695 (123659) | 123659..124039 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
HUZ81_RS24700 (124380) | 124380..124793 | - | 414 | Protein_141 | phosphopyruvate hydratase | - |
HUZ81_RS24705 (124791) | 124791..125048 | + | 258 | Protein_142 | Tn3 family transposase | - |
HUZ81_RS24710 (125282) | 125282..126139 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
HUZ81_RS24715 (126136) | 126136..126993 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
HUZ81_RS24720 (126990) | 126990..127817 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
HUZ81_RS24725 (127817) | 127817..128731 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
HUZ81_RS24730 (129087) | 129087..129784 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
HUZ81_RS24735 (129964) | 129964..130477 | - | 514 | Protein_148 | DUF4113 domain-containing protein | - |
HUZ81_RS24740 (130538) | 130538..130642 | - | 105 | Protein_149 | AAA family ATPase | - |
HUZ81_RS24745 (130644) | 130644..130967 | - | 324 | Protein_150 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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