MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP054665 Location: 4404375..4413725 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Accession: NZ_CP054665 Location: 4404375..4413725 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUR94_RS21475 (4401106) | 4401106..4401825 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| HUR94_RS21480 (4401822) | 4401822..4403453 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| HUR94_RS21485 (4403634) | 4403634..4403864 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| HUR94_RS21490 (4403876) | 4403876..4404148 | + | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| HUR94_RS21495 (4404375) | 4404375..4404671 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HUR94_RS21500 (4404699) | 4404699..4404872 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HUR94_RS21505 (4404991) | 4404991..4406508 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HUR94_RS21510 (4406745) | 4406745..4408202 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| HUR94_RS21515 (4408261) | 4408261..4410408 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HUR94_RS21520 (4410488) | 4410488..4411822 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HUR94_RS21525 (4412187) | 4412187..4413725 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HUR94_RS21535 (4414524) | 4414524..4415099 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| HUR94_RS21540 (4415136) | 4415136..4416833 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| HUR94_RS21545 (4416809) | 4416809..4417147 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HUR94_RS21550 (4417263) | 4417263..4418564 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |