MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP054665 Location: 1389324..1390304 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Accession: NZ_CP054665 Location: 1389324..1390304 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUR94_RS06875 (1385203) | 1385203..1386102 | + | 900 | WP_000817708.1 | DNA-binding transcriptional regulator PgrR | - |
| HUR94_RS06880 (1386439) | 1386439..1388052 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| HUR94_RS06885 (1388103) | 1388103..1389134 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| HUR94_RS06890 (1389324) | 1389324..1390304 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| HUR94_RS06895 (1390592) | 1390592..1391404 | - | 813 | Protein_1338 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HUR94_RS06900 (1391456) | 1391456..1392691 | - | 1236 | WP_000040854.1 | site-specific integrase | - |
| HUR94_RS06905 (1392693) | 1392693..1392908 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1393012) | 1393012..1393190 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1393012) | 1393012..1393190 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1393012) | 1393012..1393190 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1393012) | 1393012..1393190 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HUR94_RS06910 (1393008) | 1393008..1393196 | - | 189 | WP_061892272.1 | DUF1187 family protein | - |
| HUR94_RS06915 (1393189) | 1393189..1393383 | - | 195 | WP_073972148.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HUR94_RS06920 (1393416) | 1393416..1394096 | - | 681 | WP_063119825.1 | YqaJ viral recombinase family protein | - |
| HUR94_RS06925 (1394093) | 1394093..1394878 | - | 786 | WP_063119826.1 | phage recombination protein Bet | - |
| HUR94_RS06930 (1394884) | 1394884..1395180 | - | 297 | WP_061892273.1 | host-nuclease inhibitor Gam family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0 |