MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68411 bp
Accession: NZ_CP054165 Location: 1..68411 Organism: Escherichia coli strain STO_Bone2 Replicon: plasmid pBone2IncF
Accession: NZ_CP054165 Location: 1..68411 Organism: Escherichia coli strain STO_Bone2 Replicon: plasmid pBone2IncF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRS05_RS25210 (1472) | 1472..1801 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HRS05_RS25215 (1782) | 1782..2063 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| HRS05_RS25220 (2341) | 2341..2904 | + | 564 | Protein_3 | IS5 family transposase IS5D | Transposase |
| HRS05_RS25225 (2965) | 2965..3669 | + | 705 | WP_009364894.1 | IS6 family transposase IS26 | Transposase |
| HRS05_RS25230 (3723) | 3723..3968 | - | 246 | Protein_5 | NAD(+)--rifampin ADP-ribosyltransferase | - |
| HRS05_RS25235 (4053) | 4053..4685 | - | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| HRS05_RS25240 (4823) | 4823..5653 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| HRS05_RS25245 (5784) | 5784..6338 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| HRS05_RS25250 (6482) | 6482..7186 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HRS05_RS25255 (7251) | 7251..7931 | - | 681 | Protein_10 | IS91 family transposase ISAzo26 | Transposase |
| HRS05_RS25260 (8089) | 8089..8562 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| HRS05_RS25265 (8693) | 8693..9481 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| HRS05_RS25270 (9687) | 9687..10034 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| HRS05_RS25275 (10028) | 10028..10867 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| HRS05_RS25280 (10995) | 10995..11198 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| HRS05_RS25285 (11354) | 11354..12559 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| HRS05_RS25290 (12570) | 12570..12875 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| HRS05_RS25295 (12919) | 12919..12984 | + | 66 | Protein_18 | EAL domain-containing protein | - |
| HRS05_RS25300 (13097) | 13097..13801 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HRS05_RS25305 (13855) | 13855..14199 | + | 345 | Protein_20 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HRS05_RS25310 (14235) | 14235..14650 | - | 416 | Protein_21 | IS1 family transposase IS1R | Transposase |
| HRS05_RS25315 (14899) | 14899..15300 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HRS05_RS25320 (15233) | 15233..15490 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HRS05_RS25325 (15583) | 15583..16236 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HRS05_RS25330 (17176) | 17176..18033 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| HRS05_RS25335 (18026) | 18026..18100 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| HRS05_RS25340 (18100) | 18100..18231 | - | 132 | Protein_27 | protein CopA/IncA | - |
| HRS05_RS25345 (18337) | 18337..18591 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| HRS05_RS25350 (18888) | 18888..19022 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (19067) | 19067..19127 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (19067) | 19067..19127 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (19067) | 19067..19127 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (19067) | 19067..19127 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| HRS05_RS25355 (19094) | 19094..19380 | - | 287 | Protein_30 | DUF2726 domain-containing protein | - |
| HRS05_RS25360 (19893) | 19893..20105 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| HRS05_RS25365 (20236) | 20236..20796 | - | 561 | WP_042002551.1 | fertility inhibition protein FinO | - |
| HRS05_RS25370 (20851) | 20851..21597 | - | 747 | WP_023153769.1 | conjugal transfer pilus acetylase TraX | - |
| HRS05_RS25375 (21617) | 21617..26887 | - | 5271 | WP_023153768.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| HRS05_RS25380 (26887) | 26887..29076 | - | 2190 | WP_024946705.1 | type IV conjugative transfer system coupling protein TraD | - |
| HRS05_RS25385 (29073) | 29073..29852 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| HRS05_RS25390 (30055) | 30055..30786 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| HRS05_RS25395 (30818) | 30818..31315 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| HRS05_RS25400 (31334) | 31334..34153 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| HRS05_RS25405 (34150) | 34150..35523 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| HRS05_RS25410 (35510) | 35510..35902 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| HRS05_RS25415 (35883) | 35883..36230 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| HRS05_RS25420 (36160) | 36160..36705 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HRS05_RS25425 (36692) | 36692..36976 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HRS05_RS25430 (37103) | 37103..37423 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| HRS05_RS25440 (38222) | 38222..39380 | - | 1159 | Protein_47 | IS3-like element IS150 family transposase | - |
| - (39426) | 39426..39528 | - | 103 | NuclAT_0 | - | - |
| - (39426) | 39426..39528 | - | 103 | NuclAT_0 | - | - |
| - (39426) | 39426..39528 | - | 103 | NuclAT_0 | - | - |
| - (39426) | 39426..39528 | - | 103 | NuclAT_0 | - | - |
| HRS05_RS25445 (39497) | 39497..40259 | - | 763 | Protein_48 | plasmid SOS inhibition protein A | - |
| HRS05_RS25450 (40256) | 40256..40690 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| HRS05_RS25455 (40745) | 40745..42703 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| HRS05_RS25460 (42769) | 42769..43002 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| HRS05_RS25465 (43065) | 43065..43562 | - | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| HRS05_RS25470 (43712) | 43712..45613 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| HRS05_RS25475 (46291) | 46291..46497 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| HRS05_RS25480 (46908) | 46908..47174 | - | 267 | WP_032277138.1 | hypothetical protein | - |
| HRS05_RS25485 (47200) | 47200..47763 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| HRS05_RS25490 (47811) | 47811..49172 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| HRS05_RS25495 (49224) | 49224..49454 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HRS05_RS25500 (50489) | 50489..50680 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| HRS05_RS25505 (50677) | 50677..51099 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| HRS05_RS25510 (51146) | 51146..51571 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| HRS05_RS25515 (51988) | 51988..52764 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| HRS05_RS25520 (52815) | 52815..53333 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| HRS05_RS25525 (53263) | 53263..53484 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| HRS05_RS25530 (53485) | 53485..54168 | - | 684 | WP_000086185.1 | DNA methylase | - |
| HRS05_RS25535 (54245) | 54245..54556 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| HRS05_RS25540 (54553) | 54553..55455 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HRS05_RS25545 (56322) | 56322..57293 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HRS05_RS25550 (57293) | 57293..58459 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| HRS05_RS25555 (59047) | 59047..59802 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HRS05_RS25560 (60576) | 60576..61382 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HRS05_RS25565 (61383) | 61383..61688 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HRS05_RS25570 (61690) | 61690..61908 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HRS05_RS25575 (62498) | 62498..62728 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HRS05_RS25580 (62725) | 62725..63141 | + | 417 | WP_016236302.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HRS05_RS25585 (63215) | 63215..64777 | + | 1563 | WP_004206609.1 | AAA family ATPase | - |
| HRS05_RS25590 (64762) | 64762..65784 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| HRS05_RS25595 (65965) | 65965..66195 | - | 231 | Protein_78 | IS1 family transposase IS1N | Transposase |
| HRS05_RS25600 (66250) | 66250..66954 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HRS05_RS25605 (67533) | 67533..67880 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|