MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 28800 bp
Accession: NZ_CP053715 Location: 1..28800 Organism: Lichenicola cladoniae strain PAMC 26569 Replicon: plasmid unnamed8
Accession: NZ_CP053715 Location: 1..28800 Organism: Lichenicola cladoniae strain PAMC 26569 Replicon: plasmid unnamed8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HN018_RS28215 (HN018_28230) | 44..967 | + | 924 | WP_171837334.1 | endonuclease NucS | - |
| HN018_RS28220 (HN018_28235) | 1034..2002 | + | 969 | WP_171837335.1 | tyrosine-type recombinase/integrase | - |
| HN018_RS28225 (HN018_28240) | 1947..4109 | + | 2163 | WP_171837336.1 | AAA family ATPase | - |
| HN018_RS28230 (HN018_28245) | 4242..5726 | - | 1485 | WP_171837337.1 | hypothetical protein | - |
| HN018_RS28235 (HN018_28250) | 5797..6120 | - | 324 | WP_171837338.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HN018_RS28240 (HN018_28255) | 6117..6341 | - | 225 | WP_171837339.1 | antitoxin MazE family protein | Antitoxin Detail |
| HN018_RS28245 (HN018_28260) | 6712..7821 | + | 1110 | WP_171837340.1 | ATP-binding protein | - |
| HN018_RS28250 (HN018_28265) | 7818..8567 | + | 750 | WP_239479510.1 | DUF4435 domain-containing protein | - |
| HN018_RS28255 (HN018_28270) | 8819..9951 | + | 1133 | Protein_8 | IS3 family transposase | - |
| HN018_RS28260 (HN018_28275) | 10279..10572 | - | 294 | WP_171837341.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HN018_RS28265 (HN018_28280) | 10560..10832 | - | 273 | WP_171837342.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| HN018_RS28270 (HN018_28285) | 10954..11475 | + | 522 | WP_171837343.1 | hypothetical protein | - |
| HN018_RS28275 (HN018_28290) | 11507..12163 | - | 657 | WP_171837344.1 | hypothetical protein | - |
| HN018_RS28280 (HN018_28295) | 12786..13838 | - | 1053 | WP_171837345.1 | hypothetical protein | - |
| HN018_RS28285 (HN018_28300) | 14031..14303 | + | 273 | WP_171837346.1 | helix-turn-helix transcriptional regulator | - |
| HN018_RS28290 (HN018_28305) | 14526..15233 | + | 708 | WP_171837347.1 | hypothetical protein | - |
| HN018_RS28295 (HN018_28310) | 15230..15865 | + | 636 | WP_171837348.1 | hypothetical protein | - |
| HN018_RS28300 (HN018_28315) | 15937..16452 | + | 516 | WP_171837349.1 | hypothetical protein | - |
| HN018_RS28305 (HN018_28320) | 16571..17092 | - | 522 | WP_171837350.1 | hypothetical protein | - |
| HN018_RS28310 (HN018_28325) | 17270..18316 | + | 1047 | WP_172443453.1 | IS30 family transposase IS1086 | Transposase |
| HN018_RS28315 (HN018_28330) | 18602..18979 | - | 378 | WP_239479507.1 | helix-turn-helix domain-containing protein | - |
| HN018_RS29035 (HN018_28335) | 18993..19349 | - | 357 | WP_239479508.1 | hypothetical protein | - |
| HN018_RS28320 (HN018_28340) | 19389..19715 | - | 327 | WP_171837323.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HN018_RS28325 (HN018_28345) | 19712..19906 | - | 195 | WP_171837324.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HN018_RS28330 (HN018_28350) | 20050..21282 | + | 1233 | WP_171837325.1 | AAA family ATPase | - |
| HN018_RS28335 (HN018_28355) | 21378..21848 | + | 471 | WP_239479509.1 | hypothetical protein | - |
| HN018_RS28340 (HN018_28360) | 21907..22089 | - | 183 | WP_204259814.1 | hypothetical protein | - |
| HN018_RS28345 (HN018_28365) | 22355..22981 | - | 627 | WP_171837327.1 | helix-turn-helix domain-containing protein | - |
| HN018_RS28350 (HN018_28370) | 23313..23936 | + | 624 | WP_171837328.1 | ParA family protein | - |
| HN018_RS28355 (HN018_28375) | 23933..24184 | + | 252 | WP_171837329.1 | hypothetical protein | - |
| HN018_RS28360 (HN018_28380) | 24253..24831 | - | 579 | WP_171837351.1 | IS91 family transposase ISTha3 | Transposase |
| HN018_RS28365 (HN018_28385) | 24921..25217 | - | 297 | WP_171837330.1 | WGR domain-containing protein | - |
| HN018_RS28370 (HN018_28390) | 25343..26158 | - | 816 | WP_171837331.1 | hypothetical protein | - |
| HN018_RS28375 (HN018_28395) | 26421..27440 | - | 1020 | WP_171837332.1 | Tn3 family transposase TnpR_ISPa43 | Transposase |
| HN018_RS28380 (HN018_28400) | 27622..28776 | + | 1155 | WP_171837333.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|