MGE detailed information
MGE type: Conjugative plasmid MGE length: 111501 bp
Accession: NZ_CP053236 Location: 1..111501 Organism: Escherichia coli strain SCU-106 Replicon: plasmid pSCU-106-2
Accession: NZ_CP053236 Location: 1..111501 Organism: Escherichia coli strain SCU-106 Replicon: plasmid pSCU-106-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ24_RS26105 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HHJ24_RS26110 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| HHJ24_RS26115 () | 2124..2279 | - | 156 | WP_089563345.1 | transcriptional regulator | - |
| HHJ24_RS26120 () | 2319..2445 | + | 127 | Protein_3 | epoxyqueuosine reductase QueH | - |
| HHJ24_RS26125 () | 3110..4078 | + | 969 | WP_012904651.1 | IS5 family transposase IS903B | Transposase |
| HHJ24_RS26130 () | 4676..5014 | - | 339 | Protein_5 | IS66 family transposase ISEc8 | Transposase |
| HHJ24_RS26135 () | 5064..5411 | - | 348 | WP_032186105.1 | IS66 family transposase ISEc8 | Transposase |
| HHJ24_RS26140 () | 5408..5788 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| HHJ24_RS26145 () | 6005..6204 | + | 200 | Protein_8 | IS3 family transposase IS3H | Transposase |
| HHJ24_RS26150 () | 6203..6385 | - | 183 | Protein_9 | transposase | - |
| HHJ24_RS26155 () | 6433..6626 | - | 194 | Protein_10 | hypothetical protein | - |
| HHJ24_RS26160 () | 6870..7031 | + | 162 | WP_000251882.1 | hypothetical protein | - |
| HHJ24_RS26165 () | 7049..7396 | - | 348 | WP_015387384.1 | hypothetical protein | - |
| HHJ24_RS26170 () | 7698..8180 | - | 483 | WP_032331368.1 | hypothetical protein | - |
| HHJ24_RS26175 () | 8297..8986 | - | 690 | Protein_14 | 3'-5' exonuclease | - |
| HHJ24_RS26180 () | 9147..9371 | - | 225 | WP_050439874.1 | hypothetical protein | - |
| HHJ24_RS26185 () | 9623..9952 | + | 330 | WP_032331369.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HHJ24_RS26190 () | 9933..10214 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| HHJ24_RS26195 () | 10229..10555 | + | 327 | WP_032331371.1 | DNA-binding protein | - |
| HHJ24_RS26200 () | 10636..10710 | + | 75 | Protein_19 | CPBP family intramembrane metalloprotease | - |
| HHJ24_RS26205 () | 10845..11243 | + | 399 | Protein_20 | IS66 family transposase ISEc23 | Transposase |
| HHJ24_RS26215 () | 12706..12987 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| HHJ24_RS26220 () | 13567..14744 | - | 1178 | Protein_23 | IS91 family transposase ISEc37 | Transposase |
| HHJ24_RS26225 () | 14744..15109 | - | 366 | WP_109538519.1 | transposase | - |
| HHJ24_RS26230 () | 15409..15762 | - | 354 | WP_170969615.1 | cytochrome b562 family protein | - |
| HHJ24_RS26235 () | 15842..18049 | - | 2208 | WP_032331474.1 | Catalase-peroxidase | VF |
| HHJ24_RS26240 () | 18262..18956 | - | 695 | Protein_27 | IS1 family transposase | - |
| HHJ24_RS26245 () | 19021..19296 | - | 276 | WP_170969612.1 | hypothetical protein | VF |
| HHJ24_RS26250 () | 19309..19451 | + | 143 | Protein_29 | T3SS effector NleG family protein | - |
| HHJ24_RS26255 () | 19589..23679 | - | 4091 | Protein_30 | Serine protease SepA autotransporter | VF |
| HHJ24_RS26260 () | 24402..24557 | + | 156 | Protein_31 | IS256 family transposase ISEc39 | Transposase |
| HHJ24_RS26265 () | 24594..25061 | - | 468 | Protein_32 | IS256 family transposase ISSod4 | Transposase |
| HHJ24_RS26270 () | 25146..25511 | + | 366 | WP_109538519.1 | transposase | - |
| HHJ24_RS26275 () | 25511..26514 | + | 1004 | Protein_34 | IS91 family transposase ISEc37 | Transposase |
| HHJ24_RS26280 () | 26547..29432 | - | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| HHJ24_RS26285 () | 29558..30172 | + | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HHJ24_RS26290 () | 30453..32030 | - | 1578 | WP_001323889.1 | Chromosome partition protein Smc | VF |
| HHJ24_RS26295 () | 32184..32351 | - | 168 | WP_001323888.1 | hypothetical protein | - |
| HHJ24_RS26300 () | 32340..32900 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HHJ24_RS26305 () | 32904..35870 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HHJ24_RS26310 () | 35928..36170 | + | 243 | WP_000844627.1 | transposase | - |
| HHJ24_RS26315 () | 36202..36852 | - | 651 | WP_063091327.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HHJ24_RS26320 () | 36958..38157 | + | 1200 | WP_077519757.1 | Multidrug resistance protein MdtG | ARG |
| HHJ24_RS26325 () | 38189..39109 | - | 921 | WP_096954139.1 | EamA family transporter | - |
| HHJ24_RS26330 () | 39247..39654 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| HHJ24_RS26335 () | 39643..41394 | + | 1752 | Protein_46 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HHJ24_RS26340 () | 41412..42535 | + | 1124 | Protein_47 | IS3 family transposase IS1133 | Transposase |
| HHJ24_RS26345 () | 42642..43445 | + | 804 | WP_001082319.1 | hypothetical protein | ARG |
| HHJ24_RS26350 () | 43445..44281 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HHJ24_RS26355 () | 45160..48117 | - | 2958 | WP_170969595.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| HHJ24_RS26360 () | 48098..48721 | - | 624 | WP_000904945.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| HHJ24_RS26365 () | 49066..49923 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| HHJ24_RS26370 () | 49916..50398 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| HHJ24_RS26375 () | 50391..50465 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| HHJ24_RS26380 () | 50697..50954 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| HHJ24_RS26385 () | 51238..51444 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 51431..51492 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 51431..51492 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 51431..51492 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 51431..51492 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| HHJ24_RS26390 () | 51748..51822 | - | 75 | Protein_57 | endonuclease | - |
| HHJ24_RS26395 () | 52068..52280 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| HHJ24_RS26400 () | 52416..52976 | - | 561 | WP_025670714.1 | fertility inhibition protein FinO | - |
| HHJ24_RS26405 () | 53079..53939 | - | 861 | WP_000704513.1 | hypothetical protein | VF |
| HHJ24_RS26410 () | 53998..54744 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| HHJ24_RS26415 () | 54764..60031 | - | 5268 | WP_025670715.1 | Multifunctional conjugation protein TraI | Relaxase |
| HHJ24_RS26420 () | 60113..60340 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HHJ24_RS26425 () | 60340..60738 | + | 399 | WP_000911333.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HHJ24_RS26430 () | 60747..62900 | - | 2154 | WP_032330953.1 | type IV conjugative transfer system coupling protein TraD | - |
| HHJ24_RS26435 () | 63153..63884 | - | 732 | WP_000850416.1 | complement resistance protein TraT | - |
| HHJ24_RS26440 () | 63898..64407 | - | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| HHJ24_RS26445 () | 64404..67229 | - | 2826 | WP_025670717.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HHJ24_RS26450 () | 67226..68281 | - | 1056 | Protein_69 | F-type conjugal transfer protein TraH | - |
| HHJ24_RS26455 () | 68337..69034 | + | 698 | Protein_70 | IS1 family transposase | - |
| HHJ24_RS26460 () | 69050..69526 | - | 477 | Protein_71 | conjugal transfer protein TraP | - |
| HHJ24_RS26465 () | 69516..70943 | - | 1428 | WP_025670721.1 | conjugal transfer protein TraB | - |
| HHJ24_RS26470 () | 70943..71671 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| HHJ24_RS26475 () | 71770..72467 | + | 698 | Protein_74 | IS1 family transposase | - |
| HHJ24_RS26480 () | 72461..72937 | - | 477 | WP_170969613.1 | PAS domain-containing protein | - |
| HHJ24_RS26485 () | 73127..73510 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| HHJ24_RS26490 () | 73925..74434 | + | 510 | WP_000759163.1 | hypothetical protein | VF |
| HHJ24_RS26495 () | 74730..75551 | - | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| HHJ24_RS26500 () | 75670..75957 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| HHJ24_RS26505 () | 76021..76257 | + | 237 | WP_001337416.1 | hypothetical protein | - |
| HHJ24_RS26510 () | 76856..77017 | - | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 77070..77281 | - | 212 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77070..77281 | - | 212 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77070..77281 | - | 212 | NuclAT_0 | - | Antitoxin Detail |
| - () | 77070..77281 | - | 212 | NuclAT_0 | - | Antitoxin Detail |
| HHJ24_RS26515 () | 77293..78012 | - | 720 | WP_025670723.1 | plasmid SOS inhibition protein A | - |
| HHJ24_RS26520 () | 78009..78443 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| HHJ24_RS26525 () | 78498..80456 | - | 1959 | WP_170969614.1 | ParB/RepB/Spo0J family partition protein | - |
| HHJ24_RS26530 () | 80520..80753 | - | 234 | WP_001553739.1 | DUF905 family protein | - |
| HHJ24_RS26535 () | 80811..81350 | - | 540 | WP_025670725.1 | single-stranded DNA-binding protein | - |
| HHJ24_RS26540 () | 81376..81582 | - | 207 | WP_000547969.1 | hypothetical protein | - |
| HHJ24_RS26545 () | 81652..82077 | + | 426 | WP_071791129.1 | hypothetical protein | - |
| HHJ24_RS26550 () | 82163..82726 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| HHJ24_RS26555 () | 82774..84135 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| HHJ24_RS26560 () | 84187..84417 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HHJ24_RS26565 () | 84680..84937 | + | 258 | WP_001371819.1 | hypothetical protein | - |
| HHJ24_RS26570 () | 85095..85423 | + | 329 | Protein_93 | pilus assembly protein | - |
| HHJ24_RS26575 () | 85411..85593 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| HHJ24_RS26580 () | 85593..86054 | - | 462 | WP_050439867.1 | DUF1380 family protein | - |
| HHJ24_RS26585 () | 86054..86356 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| HHJ24_RS26590 () | 86452..86708 | - | 257 | Protein_97 | DUF1472 domain-containing protein | - |
| HHJ24_RS26595 () | 86881..87852 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| HHJ24_RS26600 () | 88113..88325 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| HHJ24_RS26605 () | 88338..88913 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| HHJ24_RS26610 () | 89139..89351 | - | 213 | Protein_101 | DUF1472 domain-containing protein | - |
| HHJ24_RS26615 () | 90089..91060 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HHJ24_RS26620 () | 91060..92226 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| HHJ24_RS26625 () | 92526..93232 | - | 707 | Protein_104 | IS1 family transposase IS1S | Transposase |
| HHJ24_RS26630 () | 93751..95952 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| HHJ24_RS26635 () | 96034..97311 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| HHJ24_RS26640 () | 97308..99050 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| HHJ24_RS26645 () | 99050..99997 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| HHJ24_RS26650 () | 99998..101722 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| HHJ24_RS26655 () | 101858..103051 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| HHJ24_RS26660 () | 103431..103811 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| HHJ24_RS26665 () | 104152..104565 | - | 414 | Protein_112 | phosphopyruvate hydratase | - |
| HHJ24_RS26670 () | 104563..104820 | + | 258 | Protein_113 | Tn3 family transposase | - |
| HHJ24_RS26675 () | 105054..105911 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ24_RS26680 () | 105908..106765 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ24_RS26685 () | 106762..107589 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| HHJ24_RS26690 () | 107589..108503 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| HHJ24_RS26695 () | 108859..109565 | + | 707 | Protein_118 | IS1 family transposase IS1S | Transposase |
| HHJ24_RS26700 () | 109745..110269 | - | 525 | Protein_119 | DUF4113 domain-containing protein | - |
| HHJ24_RS26705 () | 110330..110434 | - | 105 | Protein_120 | AAA family ATPase | - |
| HHJ24_RS26710 () | 110436..110759 | - | 324 | Protein_121 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|