MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP051694 Location: 4398917..4399897 Organism: Escherichia coli strain SCU-313 Replicon: chromosome
Accession: NZ_CP051694 Location: 4398917..4399897 Organism: Escherichia coli strain SCU-313 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HHJ46_RS21130 () | 4395415..4396131 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
HHJ46_RS21135 () | 4396151..4397257 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
HHJ46_RS21140 () | 4397322..4398302 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
HHJ46_RS21145 () | 4398917..4399933 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
HHJ46_RS21150 () | 4400084..4401324 | - | 1241 | Protein_4132 | helicase YjhR | - |
HHJ46_RS21155 () | 4401440..4401685 | + | 246 | Protein_4133 | GNAT family N-acetyltransferase | - |
HHJ46_RS21160 () | 4402062..4402319 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
HHJ46_RS21165 () | 4402331..4402876 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
HHJ46_RS21170 () | 4402932..4403678 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
HHJ46_RS21175 () | 4403847..4404065 | + | 219 | Protein_4137 | hypothetical protein | - |
HHJ46_RS25535 () | 4404103..4404219 | + | 117 | Protein_4138 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |